BLASTX nr result

ID: Panax21_contig00006410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006410
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23236.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002268124.2| PREDICTED: arogenate dehydratase/prephenate ...    74   2e-11
ref|XP_002316535.1| arogenate/prephenate dehydratase [Populus tr...    64   2e-08
ref|XP_002305566.1| arogenate/prephenate dehydratase [Populus tr...    59   3e-07

>emb|CBI23236.3| unnamed protein product [Vitis vinifera]
          Length = 396

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/82 (47%), Positives = 49/82 (59%)
 Frame = -2

Query: 250 MSLKAVPIWICANHSHSQFGVSDLVHKRSGSPFILRIDFGRCRKWECFALSARRAKPPVE 71
           M+LK   IW  A   H   G++DL  +R+G    LR DF R RKWEC A+  +RA  PVE
Sbjct: 1   MALKTGLIWGSATPPHPHLGLADLGGRRAGRALNLRFDFERFRKWECLAVLGQRATIPVE 60

Query: 70  DEKPLAPALASSAGIDQTQITE 5
           DEKPL P + S  G D+ + TE
Sbjct: 61  DEKPLRPGVESPGGADEAKETE 82


>ref|XP_002268124.2| PREDICTED: arogenate dehydratase/prephenate dehydratase 1,
           chloroplastic-like [Vitis vinifera]
          Length = 575

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/75 (48%), Positives = 45/75 (60%)
 Frame = -2

Query: 229 IWICANHSHSQFGVSDLVHKRSGSPFILRIDFGRCRKWECFALSARRAKPPVEDEKPLAP 50
           IW  A   H   G++DL  +R+G    LR DF R RKWEC A+  +RA  PVEDEKPL P
Sbjct: 76  IWGSATPPHPHLGLADLGGRRAGRALNLRFDFERFRKWECLAVLGQRATIPVEDEKPLRP 135

Query: 49  ALASSAGIDQTQITE 5
            + S  G D+ + TE
Sbjct: 136 GVESPGGADEAKETE 150


>ref|XP_002316535.1| arogenate/prephenate dehydratase [Populus trichocarpa]
           gi|222859600|gb|EEE97147.1| arogenate/prephenate
           dehydratase [Populus trichocarpa]
          Length = 400

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
 Frame = -2

Query: 250 MSLKAV-PIWICANHSHSQFGVSDLVHKRSGSPFILRI--DFGRCRKWECFALS--ARRA 86
           M+L+A  PIWI     HS+ GVSDL  +R      LR   D  R  KWEC  LS  A+RA
Sbjct: 1   MALRAASPIWISPLRPHSKVGVSDLGLRRCAD---LRCYWDLERLPKWECCCLSVLAQRA 57

Query: 85  KPPVEDEKPLAPALASSAGIDQTQITES 2
             PVEDEKP AP + +S   DQ Q T+S
Sbjct: 58  ITPVEDEKPSAPQVDTSRATDQVQDTQS 85


>ref|XP_002305566.1| arogenate/prephenate dehydratase [Populus trichocarpa]
           gi|222848530|gb|EEE86077.1| arogenate/prephenate
           dehydratase [Populus trichocarpa]
          Length = 397

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/83 (44%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
 Frame = -2

Query: 244 LKAVPIWICANHSHSQFGVSDLVHKRSGSPFILRIDFGRCRKWECFALS--ARRAKPPVE 71
           + A  IW+     HS  GVSDL  +R         D  R  +WEC  LS  A+RA  PVE
Sbjct: 1   MAASHIWVSPLRPHSNVGVSDLGLRRCVD-MRCNWDLERLPRWECCCLSVLAQRAITPVE 59

Query: 70  DEKPLAPALASSAGIDQTQITES 2
           DEKPL P + +S  IDQ Q T+S
Sbjct: 60  DEKPLIPQVETSEAIDQVQDTQS 82


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