BLASTX nr result

ID: Panax21_contig00006407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006407
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275249.1| PREDICTED: uncharacterized protein LOC100268...   228   2e-57
emb|CBI27204.3| unnamed protein product [Vitis vinifera]              226   4e-57
ref|XP_002533942.1| protein with unknown function [Ricinus commu...   214   3e-53
ref|XP_002303348.1| predicted protein [Populus trichocarpa] gi|2...   206   8e-51
ref|XP_002326447.1| predicted protein [Populus trichocarpa] gi|2...   204   2e-50

>ref|XP_002275249.1| PREDICTED: uncharacterized protein LOC100268160 [Vitis vinifera]
          Length = 261

 Score =  228 bits (580), Expect = 2e-57
 Identities = 131/253 (51%), Positives = 145/253 (57%)
 Frame = -1

Query: 761 DMVMKPAWLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEKNIFCLDCC 582
           DMVMKPAWL+                                       NEKN+FCL+CC
Sbjct: 25  DMVMKPAWLDGLMAETFFAGCGVHENRRK--------------------NEKNVFCLECC 64

Query: 581 QSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLIDCSYIQPYTINSAKVIFLNQRAQ 402
           QS                              LEKLI+CSYIQPYTINSAKVIFLNQR Q
Sbjct: 65  QSICPHCLPSHRSHPLLQVRRYVYHDVVRLDDLEKLINCSYIQPYTINSAKVIFLNQRPQ 124

Query: 401 SRSCKGPANTCFTCDRILQEPFHFCSLSCKVDHMVYQGEDLTSIIYRFDESDFALSQFQG 222
           SRSCKG AN CFTCDRILQEPF FCS+SCKVD+MVYQGEDL+SIIYRFDESDFA SQF+G
Sbjct: 125 SRSCKGSANICFTCDRILQEPFRFCSISCKVDYMVYQGEDLSSIIYRFDESDFAYSQFEG 184

Query: 221 LRMDGDDDGQITPNSILEDPLQFQXXXXXXXXXXXXXXSHQGPXXXXXXXXXXXXXGFLP 42
           LRM+ D++GQITPNSILEDPLQF+                + P             GFLP
Sbjct: 185 LRME-DEEGQITPNSILEDPLQFKASSCSSNETSGNSGISRDP--EAVVRKKKKSTGFLP 241

Query: 41  GIMLSLGNRRKGA 3
           G  LSL +RRKGA
Sbjct: 242 GNFLSLSSRRKGA 254


>emb|CBI27204.3| unnamed protein product [Vitis vinifera]
          Length = 236

 Score =  226 bits (577), Expect = 4e-57
 Identities = 122/204 (59%), Positives = 135/204 (66%)
 Frame = -1

Query: 614 NEKNIFCLDCCQSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLIDCSYIQPYTINS 435
           NEKN+FCL+CCQS                              LEKLI+CSYIQPYTINS
Sbjct: 29  NEKNVFCLECCQSICPHCLPSHRSHPLLQVRRYVYHDVVRLDDLEKLINCSYIQPYTINS 88

Query: 434 AKVIFLNQRAQSRSCKGPANTCFTCDRILQEPFHFCSLSCKVDHMVYQGEDLTSIIYRFD 255
           AKVIFLNQR QSRSCKG AN CFTCDRILQEPF FCS+SCKVD+MVYQGEDL+SIIYRFD
Sbjct: 89  AKVIFLNQRPQSRSCKGSANICFTCDRILQEPFRFCSISCKVDYMVYQGEDLSSIIYRFD 148

Query: 254 ESDFALSQFQGLRMDGDDDGQITPNSILEDPLQFQXXXXXXXXXXXXXXSHQGPXXXXXX 75
           ESDFA SQF+GLRM+ D++GQITPNSILEDPLQF+                + P      
Sbjct: 149 ESDFAYSQFEGLRME-DEEGQITPNSILEDPLQFKASSCSSNETSGNSGISRDP--EAVV 205

Query: 74  XXXXXXXGFLPGIMLSLGNRRKGA 3
                  GFLPG  LSL +RRKGA
Sbjct: 206 RKKKKSTGFLPGNFLSLSSRRKGA 229


>ref|XP_002533942.1| protein with unknown function [Ricinus communis]
           gi|223526087|gb|EEF28440.1| protein with unknown
           function [Ricinus communis]
          Length = 294

 Score =  214 bits (544), Expect = 3e-53
 Identities = 117/208 (56%), Positives = 131/208 (62%), Gaps = 4/208 (1%)
 Frame = -1

Query: 614 NEKNIFCLDCCQSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLIDCSYIQPYTINS 435
           NEKNIFCL CC S                              LEKLIDCSYIQPYTINS
Sbjct: 84  NEKNIFCLLCCLSICPHCLPSHHSHPLLQVRRYVYHDVVRLGDLEKLIDCSYIQPYTINS 143

Query: 434 AKVIFLNQRAQSRSCKGPANTCFTCDRILQEPFHFCSLSCKVDHMVYQGEDLTSIIYRFD 255
           AKVIFLNQR QSRSCKG AN CFTCDRILQEPFHFCSLSCKVDH+V QGEDL++++YRFD
Sbjct: 144 AKVIFLNQRPQSRSCKGSANVCFTCDRILQEPFHFCSLSCKVDHLVDQGEDLSAVLYRFD 203

Query: 254 ESDFALSQFQGLRMDG----DDDGQITPNSILEDPLQFQXXXXXXXXXXXXXXSHQGPXX 87
           ESDFA SQF+GLRMDG    D+D  I P+SILED +QF+              S +    
Sbjct: 204 ESDFAFSQFEGLRMDGSEIIDEDSHIPPSSILEDQVQFKGSSCSNETMANSGISQEA--- 260

Query: 86  XXXXXXXXXXXGFLPGIMLSLGNRRKGA 3
                      GF+PG +LSL +RRKGA
Sbjct: 261 -EVVKRKKKGSGFIPGFVLSLSSRRKGA 287


>ref|XP_002303348.1| predicted protein [Populus trichocarpa] gi|222840780|gb|EEE78327.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  206 bits (523), Expect = 8e-51
 Identities = 112/208 (53%), Positives = 128/208 (61%), Gaps = 4/208 (1%)
 Frame = -1

Query: 614 NEKNIFCLDCCQSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLIDCSYIQPYTINS 435
           NEKN+FCL CC S                              LEKLIDCSYIQPYTINS
Sbjct: 36  NEKNVFCLLCCLSICPHCLPSHRSHPLLQVRRYVYHDVVRLGDLEKLIDCSYIQPYTINS 95

Query: 434 AKVIFLNQRAQSRSCKGPANTCFTCDRILQEPFHFCSLSCKVDHMVYQGEDLTSIIYRFD 255
           AKVIFLNQR QSRSCKG +N CFTCDRILQ+PFHFCSLSCKV+H+V QG+DL++I+YR D
Sbjct: 96  AKVIFLNQRPQSRSCKGSSNNCFTCDRILQDPFHFCSLSCKVNHLVDQGDDLSAILYRID 155

Query: 254 ESDFALSQFQGLRMDG----DDDGQITPNSILEDPLQFQXXXXXXXXXXXXXXSHQGPXX 87
           ESDFA SQF+GLRMDG    DDDGQITP+SI E+P Q +                +    
Sbjct: 156 ESDFAFSQFEGLRMDGSEIIDDDGQITPSSIFENPSQHRGSSCSNEPEVLGKKEKKS--- 212

Query: 86  XXXXXXXXXXXGFLPGIMLSLGNRRKGA 3
                      GFLPG   SL +RRKG+
Sbjct: 213 -----------GFLPGNFFSLSSRRKGS 229


>ref|XP_002326447.1| predicted protein [Populus trichocarpa] gi|222833769|gb|EEE72246.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  204 bits (520), Expect = 2e-50
 Identities = 102/159 (64%), Positives = 116/159 (72%), Gaps = 4/159 (2%)
 Frame = -1

Query: 614 NEKNIFCLDCCQSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLIDCSYIQPYTINS 435
           NEKN+FCL CC S                              LEKLIDCSYIQPYTIN+
Sbjct: 27  NEKNVFCLLCCLSICPHCLPSHRSHPLLQVRRYVYHDVVRLGDLEKLIDCSYIQPYTINN 86

Query: 434 AKVIFLNQRAQSRSCKGPANTCFTCDRILQEPFHFCSLSCKVDHMVYQGEDLTSIIYRFD 255
           AKVIFLNQR QSRSCKG AN CFTCDRILQ+PFHFCSLSCKV+H+V QGEDL++I+YR D
Sbjct: 87  AKVIFLNQRPQSRSCKGSANNCFTCDRILQDPFHFCSLSCKVNHLVDQGEDLSAILYRID 146

Query: 254 ESDFALSQFQGLRMDG----DDDGQITPNSILEDPLQFQ 150
           ESDFA SQF+GLRMD     DD+GQITP+SILE+PLQ++
Sbjct: 147 ESDFAFSQFEGLRMDSSEIIDDEGQITPSSILENPLQYR 185


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