BLASTX nr result

ID: Panax21_contig00006400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006400
         (1400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513957.1| structural constituent of cell wall, putativ...   218   4e-54
ref|XP_002302309.1| predicted protein [Populus trichocarpa] gi|2...   205   2e-50
ref|XP_004136277.1| PREDICTED: uncharacterized protein LOC101210...   205   3e-50
ref|XP_002306566.1| predicted protein [Populus trichocarpa] gi|2...   201   4e-49
ref|XP_002284066.1| PREDICTED: uncharacterized protein LOC100257...   183   1e-43

>ref|XP_002513957.1| structural constituent of cell wall, putative [Ricinus communis]
           gi|223547043|gb|EEF48540.1| structural constituent of
           cell wall, putative [Ricinus communis]
          Length = 287

 Score =  218 bits (554), Expect = 4e-54
 Identities = 124/227 (54%), Positives = 144/227 (63%), Gaps = 8/227 (3%)
 Frame = -1

Query: 956 VYNINKSDFRDVVQKLTGSPAHERFSTPPPIQPPKLTSSRLQKIRXXXXXXXXXXXXXXL 777
           VYNINK+DFRDVVQKLTGSPAHER+STPPPI PPK  SSRLQ+IR              L
Sbjct: 65  VYNINKNDFRDVVQKLTGSPAHERYSTPPPIHPPKPQSSRLQRIRPPPLAHVSNRPPPLL 124

Query: 776 NCGPTAVXXXXXXXXXXXXXXXXXXSFVRQVQPLSPLPPFPAVHTAAESPISAYMRYLQ- 600
           N   +A+                     R   PLSPLPPFPAVH AAESP+SAYMRYLQ 
Sbjct: 125 N---SALPPQQQPPLHAPMNPPMPMPIQRPSAPLSPLPPFPAVHAAAESPVSAYMRYLQN 181

Query: 599 --SSNSNTDSDSKRFAGFSTLAPLVSPRWNNFAXXXXXXXXXXXXXPIAASSAPLHFPMP 426
             S++++ DS++K+F+GFS LAPLVSPRWNN A             P   +S PL F +P
Sbjct: 182 SISASASADSNNKQFSGFSPLAPLVSPRWNNLAPPPQQQQQPFAPPPPVMASQPLQFQLP 241

Query: 425 SSPLPFGCLPSPRSPYPSLFSPTTFQQ---FPLSPT--VPSPRWKGV 300
           +SPLPFGCL SPRSP+P L SP        FPLSPT  VPSPRW+G+
Sbjct: 242 TSPLPFGCLNSPRSPHP-LLSPCLLMSPSAFPLSPTLPVPSPRWRGL 287


>ref|XP_002302309.1| predicted protein [Populus trichocarpa] gi|222844035|gb|EEE81582.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  205 bits (522), Expect = 2e-50
 Identities = 123/232 (53%), Positives = 138/232 (59%), Gaps = 13/232 (5%)
 Frame = -1

Query: 956 VYNINKSDFRDVVQKLTGSPAHERFSTPPPIQPPKLTSSRLQKIRXXXXXXXXXXXXXXL 777
           VYNINK+DFRDVVQKLTGSPAHERFSTPPPI PPK  SSRLQ+IR              L
Sbjct: 100 VYNINKNDFRDVVQKLTGSPAHERFSTPPPIHPPKPQSSRLQRIRPPPLAHVSNRPPPSL 159

Query: 776 NCG--PTAVXXXXXXXXXXXXXXXXXXSFVRQVQPLSPLPPFPAVHTAAESPISAYMRYL 603
           N    P                        R   PLSPLPPFPAVH AAESP+SAYMRYL
Sbjct: 160 NSTIPPPQQPPLTTVPNPNTSASATNSFIQRSTAPLSPLPPFPAVHAAAESPVSAYMRYL 219

Query: 602 QSSNSNTDSDSKRFAGFSTLAPLVSPRWNNF-----AXXXXXXXXXXXXXPIAASSAPL- 441
           Q++ S  DS +K+F+GFS LAPLVSPRWNN                     +A   AP  
Sbjct: 220 QNTISAVDS-NKQFSGFSPLAPLVSPRWNNMMAPQQQFAMPPPQQVMNPSQLAGMVAPQP 278

Query: 440 HFPMPSSPLPFGCLPSPRSPYPSLFSPTTF---QQFPLSPTVP--SPRWKGV 300
            F +P+SPLPFGC+ SPRSPYP L SP+       FPLSPTVP  SPRW+G+
Sbjct: 279 QFQLPTSPLPFGCMNSPRSPYP-LLSPSLLLSPSSFPLSPTVPVTSPRWRGL 329


>ref|XP_004136277.1| PREDICTED: uncharacterized protein LOC101210580 [Cucumis sativus]
          Length = 336

 Score =  205 bits (521), Expect = 3e-50
 Identities = 124/239 (51%), Positives = 138/239 (57%), Gaps = 20/239 (8%)
 Frame = -1

Query: 956 VYNINKSDFRDVVQKLTGSPAHERFSTPPPIQPPKLTSSRLQKIRXXXXXXXXXXXXXXL 777
           VYNINK+DFRDVVQKLTGSPAHERFS PPPI PPK  SSRLQ+IR              L
Sbjct: 98  VYNINKNDFRDVVQKLTGSPAHERFSNPPPIHPPKPQSSRLQRIRPPPLANVSNRPPPML 157

Query: 776 NCGPTAVXXXXXXXXXXXXXXXXXXS--FVRQVQP-LSPLPPFPAVHTAAESPISAYMRY 606
           N G                      +  F R V P LSPLPP PAVH  AESP+SAYMRY
Sbjct: 158 NSGVPLPQQQQQPPPGLNPRNSLSSANNFGRPVAPPLSPLPPLPAVHAPAESPVSAYMRY 217

Query: 605 LQSSNSNTDSDSKRFAGFSTLAPLVSPRWNNFAXXXXXXXXXXXXXPI------AASSAP 444
           L +S S  DS  K+F+GFS LAPLVSPRWNN                I      AA ++ 
Sbjct: 218 LHTSFSTLDSSQKQFSGFSPLAPLVSPRWNNLTSQQHLPPPAMAPGTIPPPPSSAAITSD 277

Query: 443 LHFPMPSSPLPFGCLPSPRSPYP-----SLFSPTT----FQQFPLSPT--VPSPRWKGV 300
              PMPSSPLPFGC+ SPRS YP      LFSP+     + QFPLSPT  VPSPRW+ +
Sbjct: 278 SQLPMPSSPLPFGCMNSPRSAYPLLSPSLLFSPSAGPLGYPQFPLSPTVPVPSPRWRNL 336


>ref|XP_002306566.1| predicted protein [Populus trichocarpa] gi|222856015|gb|EEE93562.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  201 bits (511), Expect = 4e-49
 Identities = 122/232 (52%), Positives = 141/232 (60%), Gaps = 13/232 (5%)
 Frame = -1

Query: 956 VYNINKSDFRDVVQKLTGSPAHERFSTPPPIQPPKLTSSRLQKIRXXXXXXXXXXXXXXL 777
           VYNINKSDFRD+VQKLTGSPAHERFSTPPPI PPK  S RLQ+IR              L
Sbjct: 85  VYNINKSDFRDLVQKLTGSPAHERFSTPPPIHPPKPQSIRLQRIRPPPLVQVSNRPPPLL 144

Query: 776 NCGPTAVXXXXXXXXXXXXXXXXXXSFV-RQVQPLSPLPPFPAVHTAAESPISAYMRYLQ 600
           N   + +                  +F+ R   PLSPLPPFPAVH AAESP+SAYMRYLQ
Sbjct: 145 N---SVIPPPQQKLLTTASNPSATNTFIQRSTTPLSPLPPFPAVHAAAESPVSAYMRYLQ 201

Query: 599 SSNSNTDSDSKRFAGFSTLAPLVSPRWNNFAXXXXXXXXXXXXXPI-----AASSAPL-- 441
           ++ S  DS +K+F+GFS LAPLVSPRWNN                +     A   AP   
Sbjct: 202 NTISAVDS-NKQFSGFSPLAPLVSPRWNNQTASKQQFPFPPQQQGVDPSQSAGMIAPQAH 260

Query: 440 ---HFPMPSSPLPFGCLPSPRSPYPSLFSPTTFQQFPLSPTVP--SPRWKGV 300
               F +P+SPLPFGCL SPRSPYP L SP++   FPLSPTVP  SPRW+ +
Sbjct: 261 EQPQFQLPTSPLPFGCLNSPRSPYP-LLSPSS---FPLSPTVPVHSPRWRSL 308


>ref|XP_002284066.1| PREDICTED: uncharacterized protein LOC100257517 [Vitis vinifera]
          Length = 335

 Score =  183 bits (464), Expect = 1e-43
 Identities = 121/249 (48%), Positives = 132/249 (53%), Gaps = 30/249 (12%)
 Frame = -1

Query: 956 VYNINKSDFRDVVQKLTGSPAHERFSTPPP-------------IQPPKLT--SSRLQKI- 825
           VYNINK+DFRDVVQKLTGSPAHERFSTPPP             I+PP L   S+R   + 
Sbjct: 94  VYNINKNDFRDVVQKLTGSPAHERFSTPPPIQPPKPQSSRLQRIRPPPLAHVSNRPPLVQ 153

Query: 824 ---RXXXXXXXXXXXXXXLNCGPTAVXXXXXXXXXXXXXXXXXXSFVRQVQPLSPLPPFP 654
              R                  P                        RQV PLSPLPPFP
Sbjct: 154 VSNRPPHMLNSAVPPPPASTLNPNNPINNSVGTFAVPGCTFGNNG--RQVSPLSPLPPFP 211

Query: 653 AVHTAAESPISAYMRYLQSSNSNTDSDSKRFAGFSTLAPLVSPRWNNFAXXXXXXXXXXX 474
           AVH AAESPISAYMR  Q++    DSD KR  GFS LAPLVSPRW N A           
Sbjct: 212 AVHAAAESPISAYMRLFQTA----DSDPKRLPGFSPLAPLVSPRWTNPAPPPHQTGIPPP 267

Query: 473 XXPIAASSAPLHFPMPSSPLPFGCLPSPRSPYP-----SLFSPTT----FQQFPLSP--T 327
                 S++   F MPSSPLPFGCLPSPRSPYP      LFSP+     F QFPLSP   
Sbjct: 268 PTSTMTSNSS-QFGMPSSPLPFGCLPSPRSPYPLLSPSLLFSPSAGQLGFPQFPLSPRLP 326

Query: 326 VPSPRWKGV 300
           VPSPRW+ +
Sbjct: 327 VPSPRWRDI 335


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