BLASTX nr result

ID: Panax21_contig00006378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006378
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147860.1| PREDICTED: tubby-like F-box protein 5-like [...   162   2e-38
ref|XP_003544406.1| PREDICTED: tubby-like F-box protein 5-like [...   155   4e-36
ref|XP_004146502.1| PREDICTED: tubby-like F-box protein 5-like [...   154   7e-36
ref|XP_002510406.1| phosphoric diester hydrolase, putative [Rici...   151   6e-35
emb|CBI19713.3| unnamed protein product [Vitis vinifera]              150   8e-35

>ref|XP_004147860.1| PREDICTED: tubby-like F-box protein 5-like [Cucumis sativus]
           gi|449476828|ref|XP_004154845.1| PREDICTED: tubby-like
           F-box protein 5-like [Cucumis sativus]
          Length = 382

 Score =  162 bits (411), Expect = 2e-38
 Identities = 74/104 (71%), Positives = 89/104 (85%), Gaps = 2/104 (1%)
 Frame = -3

Query: 308 GRSYVAPER--STSPPATVQQSRWANLPPELLLDIIRSLEVSETVWPARRDVVCCAAVCR 135
           G+S++ PE+  S+S P  V+QSRWANLPPELLLD+I+ +E SET WP+RRDVV CA+VCR
Sbjct: 5   GKSHIVPEQPSSSSSPVPVEQSRWANLPPELLLDVIQRVEASETSWPSRRDVVACASVCR 64

Query: 134 SWRATTKEVIRTPEQCGLFTFPMSLKQPGPRDSPIQCYIKRGRA 3
           SWR  TKEV+RTPEQCG  TFP+SLKQPGPRD+PIQC+IKR RA
Sbjct: 65  SWRMITKEVVRTPEQCGWITFPISLKQPGPRDTPIQCFIKRERA 108


>ref|XP_003544406.1| PREDICTED: tubby-like F-box protein 5-like [Glycine max]
          Length = 423

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/106 (68%), Positives = 86/106 (81%), Gaps = 5/106 (4%)
 Frame = -3

Query: 308 GRSYVAPERSTSPP-----ATVQQSRWANLPPELLLDIIRSLEVSETVWPARRDVVCCAA 144
           G+S++APE S  PP     ++  QSRWANLPPELLLDII+ LE SET WPARR +V CA+
Sbjct: 34  GKSHIAPECSLPPPPPPPPSSSSQSRWANLPPELLLDIIQRLEASETSWPARRALVACAS 93

Query: 143 VCRSWRATTKEVIRTPEQCGLFTFPMSLKQPGPRDSPIQCYIKRGR 6
           VCR WR  TK+VI+TPEQCGL TFP+SLKQPGPRDSPIQC+I+R R
Sbjct: 94  VCRLWREITKDVIKTPEQCGLLTFPISLKQPGPRDSPIQCFIRRER 139


>ref|XP_004146502.1| PREDICTED: tubby-like F-box protein 5-like [Cucumis sativus]
           gi|449499981|ref|XP_004160969.1| PREDICTED: tubby-like
           F-box protein 5-like [Cucumis sativus]
          Length = 414

 Score =  154 bits (389), Expect = 7e-36
 Identities = 70/100 (70%), Positives = 82/100 (82%)
 Frame = -3

Query: 302 SYVAPERSTSPPATVQQSRWANLPPELLLDIIRSLEVSETVWPARRDVVCCAAVCRSWRA 123
           S++AP++  SP   +QQ RWANLPPELLLDIIR +E SET WPAR  VV CA+VCRSWR 
Sbjct: 37  SHIAPDQEPSPLELIQQGRWANLPPELLLDIIRRVEESETSWPARAVVVFCASVCRSWRT 96

Query: 122 TTKEVIRTPEQCGLFTFPMSLKQPGPRDSPIQCYIKRGRA 3
            TKE+IRTPEQCG  TFP+SLKQPGPR+SP QC+I+R RA
Sbjct: 97  ITKEIIRTPEQCGRLTFPISLKQPGPRESPFQCFIRRDRA 136


>ref|XP_002510406.1| phosphoric diester hydrolase, putative [Ricinus communis]
           gi|223551107|gb|EEF52593.1| phosphoric diester
           hydrolase, putative [Ricinus communis]
          Length = 413

 Score =  151 bits (381), Expect = 6e-35
 Identities = 69/108 (63%), Positives = 86/108 (79%), Gaps = 3/108 (2%)
 Frame = -3

Query: 317 RLSGRSYVAPERST---SPPATVQQSRWANLPPELLLDIIRSLEVSETVWPARRDVVCCA 147
           R  GRS++APE ++   S    + QS WANLPPELL DII+ +E +ET WPARRDVV CA
Sbjct: 27  RRRGRSHIAPESASEILSNQVIIDQSPWANLPPELLHDIIQKVEATETSWPARRDVVACA 86

Query: 146 AVCRSWRATTKEVIRTPEQCGLFTFPMSLKQPGPRDSPIQCYIKRGRA 3
           +VC+SWR  TKE+++TPEQCG  TFP+SLKQPGPRD+PIQC+I+R RA
Sbjct: 87  SVCKSWREITKEIVKTPEQCGCLTFPISLKQPGPRDAPIQCFIRRERA 134


>emb|CBI19713.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/103 (67%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 GRSYVAPERSTSPPATVQQ-SRWANLPPELLLDIIRSLEVSETVWPARRDVVCCAAVCRS 132
           GRS++APE S S  A  QQ S+WAN+PPELLLDII+ +E +E  WPARRDVV C +VCRS
Sbjct: 34  GRSHIAPEGSPSSSALFQQQSQWANMPPELLLDIIQRVEAAEASWPARRDVVSCGSVCRS 93

Query: 131 WRATTKEVIRTPEQCGLFTFPMSLKQPGPRDSPIQCYIKRGRA 3
           WR  TKE+++TPEQCG  TFP+SLKQPGPR+S IQC+IKR RA
Sbjct: 94  WRDITKEIVKTPEQCGCLTFPISLKQPGPRESQIQCFIKRERA 136


Top