BLASTX nr result

ID: Panax21_contig00006377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006377
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit ...   198   3e-63
ref|XP_004140517.1| PREDICTED: COP9 signalosome complex subunit ...   204   8e-63
gb|ABK94750.1| unknown [Populus trichocarpa]                          194   5e-62
gb|AEB71560.1| COP9 complex subunit 7a [Solanum chacoense]            231   2e-58
ref|XP_003633896.1| PREDICTED: COP9 signalosome complex subunit ...   229   6e-58

>ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 1 [Vitis
           vinifera] gi|297734611|emb|CBI16662.3| unnamed protein
           product [Vitis vinifera]
          Length = 259

 Score =  198 bits (503), Expect(2) = 3e-63
 Identities = 98/111 (88%), Positives = 104/111 (93%)
 Frame = +3

Query: 3   DVLMQELDVTNVRELEDFLINECMYVGIVRGKLDQLRRCFEVQFAAGRDLRPEQLGNMIQ 182
           D LMQELDVTNVRELEDFLINECMY GIVRGKLDQLRRCFEVQFAAGRDLRP QLG MIQ
Sbjct: 113 DQLMQELDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGCMIQ 172

Query: 183 TLSSWLTTSDNLLISIQDKIKWADNMSELDKKHRKEVEERIDEVKKSVSLK 335
           TLS+WL TSDNLL+SIQ+KIKWAD MSELDKKHRKEVEER++EVKKS S+K
Sbjct: 173 TLSNWLGTSDNLLLSIQEKIKWADTMSELDKKHRKEVEERVEEVKKSFSVK 223



 Score = 70.5 bits (171), Expect(2) = 3e-63
 Identities = 29/37 (78%), Positives = 36/37 (97%)
 Frame = +2

Query: 353 QADMDFRGHEEIFAESGGVMDYDEDRSRPKRRRHPLA 463
           +AD+DFRGHEEI++E GGVMDY+EDRSRPKRRRHP++
Sbjct: 223 KADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPIS 259


>ref|XP_004140517.1| PREDICTED: COP9 signalosome complex subunit 7-like [Cucumis
           sativus] gi|449514708|ref|XP_004164457.1| PREDICTED:
           COP9 signalosome complex subunit 7-like [Cucumis
           sativus]
          Length = 259

 Score =  204 bits (518), Expect(2) = 8e-63
 Identities = 98/111 (88%), Positives = 108/111 (97%)
 Frame = +3

Query: 3   DVLMQELDVTNVRELEDFLINECMYVGIVRGKLDQLRRCFEVQFAAGRDLRPEQLGNMIQ 182
           D LMQELDVTNVRELEDFLINECMY GIVRGKLDQLRRCFEVQFAAGRDLRP QLGNMI+
Sbjct: 113 DQLMQELDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIR 172

Query: 183 TLSSWLTTSDNLLISIQDKIKWADNMSELDKKHRKEVEERIDEVKKSVSLK 335
           TLS+WLTTSDNLL+SIQ+KIKWADNMSELDKKHRK+V++R++EVKKS+SLK
Sbjct: 173 TLSNWLTTSDNLLVSIQEKIKWADNMSELDKKHRKDVDDRVEEVKKSLSLK 223



 Score = 63.2 bits (152), Expect(2) = 8e-63
 Identities = 26/37 (70%), Positives = 34/37 (91%)
 Frame = +2

Query: 353 QADMDFRGHEEIFAESGGVMDYDEDRSRPKRRRHPLA 463
           +A++D R HEEI++E GGVMDY+EDRSRPKRRRHP++
Sbjct: 223 KANIDIREHEEIYSEPGGVMDYEEDRSRPKRRRHPIS 259


>gb|ABK94750.1| unknown [Populus trichocarpa]
          Length = 259

 Score =  194 bits (493), Expect(2) = 5e-62
 Identities = 94/111 (84%), Positives = 105/111 (94%)
 Frame = +3

Query: 3   DVLMQELDVTNVRELEDFLINECMYVGIVRGKLDQLRRCFEVQFAAGRDLRPEQLGNMIQ 182
           D LMQELDVTNVRELEDFLINECMY GIVRGKLDQLRRCFEVQFAAGRDLRP QLGNM+Q
Sbjct: 113 DQLMQELDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMLQ 172

Query: 183 TLSSWLTTSDNLLISIQDKIKWADNMSELDKKHRKEVEERIDEVKKSVSLK 335
           TLS+WL TSD+LL+SIQ+KIKWAD+ SELDKKH+K+VE R++EVKKS+SLK
Sbjct: 173 TLSNWLDTSDDLLVSIQEKIKWADSTSELDKKHQKDVEYRVEEVKKSLSLK 223



 Score = 70.1 bits (170), Expect(2) = 5e-62
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = +2

Query: 353 QADMDFRGHEEIFAESGGVMDYDEDRSRPKRRRHPL 460
           +AD+DFRGHEEI++E GGVMDY+EDRSRPKRRRHP+
Sbjct: 223 KADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 258


>gb|AEB71560.1| COP9 complex subunit 7a [Solanum chacoense]
          Length = 247

 Score =  231 bits (588), Expect = 2e-58
 Identities = 115/135 (85%), Positives = 124/135 (91%)
 Frame = +3

Query: 3   DVLMQELDVTNVRELEDFLINECMYVGIVRGKLDQLRRCFEVQFAAGRDLRPEQLGNMIQ 182
           D LMQELDVTNVRELEDFLINECMYVGIVRGKLDQL+RCFEVQFAAGRDLRP QLGNM+Q
Sbjct: 113 DQLMQELDVTNVRELEDFLINECMYVGIVRGKLDQLKRCFEVQFAAGRDLRPGQLGNMLQ 172

Query: 183 TLSSWLTTSDNLLISIQDKIKWADNMSELDKKHRKEVEERIDEVKKSVSLKKLQPVSRQT 362
           TL+ WLTTSDNLL+SIQ+KIKWAD MSE D+KHRKEVEER+DEVKKS+SLKKLQ VSR  
Sbjct: 173 TLTDWLTTSDNLLVSIQEKIKWADTMSESDRKHRKEVEERVDEVKKSLSLKKLQTVSRPM 232

Query: 363 WTSEGTRRFSLNLVE 407
            TSEG RR +LNLVE
Sbjct: 233 LTSEGMRRSTLNLVE 247


>ref|XP_003633896.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 2 [Vitis
           vinifera]
          Length = 247

 Score =  229 bits (583), Expect = 6e-58
 Identities = 116/135 (85%), Positives = 123/135 (91%)
 Frame = +3

Query: 3   DVLMQELDVTNVRELEDFLINECMYVGIVRGKLDQLRRCFEVQFAAGRDLRPEQLGNMIQ 182
           D LMQELDVTNVRELEDFLINECMY GIVRGKLDQLRRCFEVQFAAGRDLRP QLG MIQ
Sbjct: 113 DQLMQELDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGCMIQ 172

Query: 183 TLSSWLTTSDNLLISIQDKIKWADNMSELDKKHRKEVEERIDEVKKSVSLKKLQPVSRQT 362
           TLS+WL TSDNLL+SIQ+KIKWAD MSELDKKHRKEVEER++EVKKS S+KKL  VSR T
Sbjct: 173 TLSNWLGTSDNLLLSIQEKIKWADTMSELDKKHRKEVEERVEEVKKSFSVKKLHTVSRPT 232

Query: 363 WTSEGTRRFSLNLVE 407
            TSEGTRR +LNLVE
Sbjct: 233 LTSEGTRRSTLNLVE 247


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