BLASTX nr result

ID: Panax21_contig00006370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006370
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor ...   156   5e-36
ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor ...   156   5e-36
ref|XP_002316931.1| predicted protein [Populus trichocarpa] gi|2...   149   1e-33
ref|XP_002531044.1| Stromal membrane-associated protein, putativ...   143   5e-32
ref|XP_002330426.1| predicted protein [Populus trichocarpa] gi|2...   136   5e-30

>ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD5-like isoform 1 [Vitis vinifera]
          Length = 475

 Score =  156 bits (395), Expect = 5e-36
 Identities = 87/167 (52%), Positives = 109/167 (65%), Gaps = 1/167 (0%)
 Frame = -2

Query: 827 IMSLFEKSNMVSPFAVHXXXXXXXXXXXXXXXXXXAKSGGV-PKFSGSSQQSRSNGTDVP 651
           IMSLFEKSNMVSPF++H                  AKS GV PKFS ++QQ  SNGTD+P
Sbjct: 317 IMSLFEKSNMVSPFSLHQQQLAMLAQQQSLLMAAAAKSTGVAPKFSINAQQHSSNGTDLP 376

Query: 650 SQNWPSVGYQIPGMMIPIAGKTDLEKFMQSQMGSIGATFPVGKSVPFPVPGIYNMGQNAS 471
           +QNWP++GYQIPGMM+  AG  D++KFMQ+   ++G T P G SVPF    +Y MGQ A 
Sbjct: 377 TQNWPNMGYQIPGMMMQAAGNNDMQKFMQA--ANMGPTHPAGNSVPFATSSMYTMGQVAP 434

Query: 470 GNGVAPAPSGATKPQSAASPVPSTVSTQKTGNDFDFSSLTQGMFSKP 330
            NGV  A +  ++P SA+   P T    + G ++DFSSLTQGMFSKP
Sbjct: 435 TNGV--ATTSVSRPPSASPATPPT----QPGKEYDFSSLTQGMFSKP 475


>ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD5-like isoform 2 [Vitis vinifera]
           gi|302143074|emb|CBI20369.3| unnamed protein product
           [Vitis vinifera]
          Length = 478

 Score =  156 bits (395), Expect = 5e-36
 Identities = 87/167 (52%), Positives = 109/167 (65%), Gaps = 1/167 (0%)
 Frame = -2

Query: 827 IMSLFEKSNMVSPFAVHXXXXXXXXXXXXXXXXXXAKSGGV-PKFSGSSQQSRSNGTDVP 651
           IMSLFEKSNMVSPF++H                  AKS GV PKFS ++QQ  SNGTD+P
Sbjct: 320 IMSLFEKSNMVSPFSLHQQQLAMLAQQQSLLMAAAAKSTGVAPKFSINAQQHSSNGTDLP 379

Query: 650 SQNWPSVGYQIPGMMIPIAGKTDLEKFMQSQMGSIGATFPVGKSVPFPVPGIYNMGQNAS 471
           +QNWP++GYQIPGMM+  AG  D++KFMQ+   ++G T P G SVPF    +Y MGQ A 
Sbjct: 380 TQNWPNMGYQIPGMMMQAAGNNDMQKFMQA--ANMGPTHPAGNSVPFATSSMYTMGQVAP 437

Query: 470 GNGVAPAPSGATKPQSAASPVPSTVSTQKTGNDFDFSSLTQGMFSKP 330
            NGV  A +  ++P SA+   P T    + G ++DFSSLTQGMFSKP
Sbjct: 438 TNGV--ATTSVSRPPSASPATPPT----QPGKEYDFSSLTQGMFSKP 478


>ref|XP_002316931.1| predicted protein [Populus trichocarpa] gi|222859996|gb|EEE97543.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  149 bits (375), Expect = 1e-33
 Identities = 87/178 (48%), Positives = 110/178 (61%), Gaps = 13/178 (7%)
 Frame = -2

Query: 827 IMSLFEKSNMVSPFAVHXXXXXXXXXXXXXXXXXXAKS--------GGVPKFSGSSQQSR 672
           IMSLFEKSNMVSPFA+H                  AKS        GG  K SGS QQ  
Sbjct: 318 IMSLFEKSNMVSPFAMHQQQLAMLAQQQQLLMAAAAKSAGGDPKSVGGDLKLSGSIQQQG 377

Query: 671 SNGTDVPSQNWPSVGYQIPGMMIPIAGKTDLEKFMQ-----SQMGSIGATFPVGKSVPFP 507
            NG ++P+QNWP++GYQIPG+M+P+AG+ DL+K MQ      Q+G+IG T P G ++ +P
Sbjct: 378 PNGINIPAQNWPNMGYQIPGLMMPVAGQGDLQKLMQVHIMELQIGNIGLTHPGGSAIQYP 437

Query: 506 VPGIYNMGQNASGNGVAPAPSGATKPQSAASPVPSTVSTQKTGNDFDFSSLTQGMFSK 333
               ++MGQ    NG     +GA+K QSAA PV S  +  +TG D+DFSSLTQGMFSK
Sbjct: 438 PSSFFDMGQVNPANG--GTSTGASKTQSAA-PVSSGGTKMQTGKDYDFSSLTQGMFSK 492


>ref|XP_002531044.1| Stromal membrane-associated protein, putative [Ricinus communis]
           gi|223529372|gb|EEF31337.1| Stromal membrane-associated
           protein, putative [Ricinus communis]
          Length = 482

 Score =  143 bits (360), Expect = 5e-32
 Identities = 85/167 (50%), Positives = 109/167 (65%), Gaps = 2/167 (1%)
 Frame = -2

Query: 827 IMSLFEKSNMVSPFAVHXXXXXXXXXXXXXXXXXXAKSGGV-PKFSGSSQQSRSNGTDVP 651
           IMSLFEK+NMVSPFA+H                  AKSG + PKF G  QQ+ SNG ++P
Sbjct: 321 IMSLFEKTNMVSPFAMHQQQLAMLAQQQSLLMAAAAKSGVMDPKFPGGIQQAGSNGINLP 380

Query: 650 SQNWPSVGYQIPGMMIPIA-GKTDLEKFMQSQMGSIGATFPVGKSVPFPVPGIYNMGQNA 474
           +QNWP++GYQIPG+++P+A G+ D  K +Q+  G+ G + PV  SVP+P    Y MGQ A
Sbjct: 381 AQNWPNLGYQIPGLVMPVAGGQGDPRKLIQT--GNTGLSNPVASSVPYPTSSFYTMGQVA 438

Query: 473 SGNGVAPAPSGATKPQSAASPVPSTVSTQKTGNDFDFSSLTQGMFSK 333
             NGVA A  G +KPQS A PV S  S+Q +  D+DFS+LTQG FSK
Sbjct: 439 PVNGVATA--GMSKPQSTA-PVSSGTSSQ-SAKDYDFSALTQGFFSK 481


>ref|XP_002330426.1| predicted protein [Populus trichocarpa] gi|222871811|gb|EEF08942.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  136 bits (343), Expect = 5e-30
 Identities = 77/169 (45%), Positives = 96/169 (56%), Gaps = 4/169 (2%)
 Frame = -2

Query: 827 IMSLFEKSNMVSPFAVHXXXXXXXXXXXXXXXXXXAKS----GGVPKFSGSSQQSRSNGT 660
           IMSLFEKSNMVSPFA+H                    +    GG  K SGS QQ   NG 
Sbjct: 315 IMSLFEKSNMVSPFAMHQQQLAMLAQQQLLMAAAAKSAAKSAGGDQKLSGSIQQQGPNGI 374

Query: 659 DVPSQNWPSVGYQIPGMMIPIAGKTDLEKFMQSQMGSIGATFPVGKSVPFPVPGIYNMGQ 480
            +P+QNWP++GYQIPG+M+P+AG+ DL+K  Q+    +G T P G SVP+P   +YN+ Q
Sbjct: 375 SIPAQNWPNIGYQIPGLMMPVAGQGDLQKIKQT--ADMGLTHPGGSSVPYPTSSLYNIEQ 432

Query: 479 NASGNGVAPAPSGATKPQSAASPVPSTVSTQKTGNDFDFSSLTQGMFSK 333
               NG      G T+  S+ S   ST      G D+DFSSL QGMFSK
Sbjct: 433 VTPANGGTNNGVGKTQSSSSVSSGTST----PAGKDYDFSSLMQGMFSK 477


Top