BLASTX nr result

ID: Panax21_contig00006369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006369
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor ...   134   1e-29
ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor ...   134   1e-29
ref|XP_002316931.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002531044.1| Stromal membrane-associated protein, putativ...   124   1e-26
ref|XP_002330426.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26

>ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD5-like isoform 1 [Vitis vinifera]
          Length = 475

 Score =  134 bits (337), Expect = 1e-29
 Identities = 69/129 (53%), Positives = 88/129 (68%)
 Frame = -2

Query: 631 SGGVPKFPGNSQQSGSSGTDVPSQNWPNVGYQIPGMMMPIAGKTDLEKFMQSQMGSIGAT 452
           +G  PKF  N+QQ  S+GTD+P+QNWPN+GYQIPGMMM  AG  D++KFMQ+   ++G T
Sbjct: 355 TGVAPKFSINAQQHSSNGTDLPTQNWPNMGYQIPGMMMQAAGNNDMQKFMQA--ANMGPT 412

Query: 451 FPVGNSVPFPVPGIYNMGQNASGNGVAPAPSGATKSQSAASLVPSTASSQKTGNDFDFSS 272
            P GNSVPF    +Y MGQ A  NGV  A +  ++  SA+   P T    + G ++DFSS
Sbjct: 413 HPAGNSVPFATSSMYTMGQVAPTNGV--ATTSVSRPPSASPATPPT----QPGKEYDFSS 466

Query: 271 LTQGMFSKP 245
           LTQGMFSKP
Sbjct: 467 LTQGMFSKP 475


>ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD5-like isoform 2 [Vitis vinifera]
           gi|302143074|emb|CBI20369.3| unnamed protein product
           [Vitis vinifera]
          Length = 478

 Score =  134 bits (337), Expect = 1e-29
 Identities = 69/129 (53%), Positives = 88/129 (68%)
 Frame = -2

Query: 631 SGGVPKFPGNSQQSGSSGTDVPSQNWPNVGYQIPGMMMPIAGKTDLEKFMQSQMGSIGAT 452
           +G  PKF  N+QQ  S+GTD+P+QNWPN+GYQIPGMMM  AG  D++KFMQ+   ++G T
Sbjct: 358 TGVAPKFSINAQQHSSNGTDLPTQNWPNMGYQIPGMMMQAAGNNDMQKFMQA--ANMGPT 415

Query: 451 FPVGNSVPFPVPGIYNMGQNASGNGVAPAPSGATKSQSAASLVPSTASSQKTGNDFDFSS 272
            P GNSVPF    +Y MGQ A  NGV  A +  ++  SA+   P T    + G ++DFSS
Sbjct: 416 HPAGNSVPFATSSMYTMGQVAPTNGV--ATTSVSRPPSASPATPPT----QPGKEYDFSS 469

Query: 271 LTQGMFSKP 245
           LTQGMFSKP
Sbjct: 470 LTQGMFSKP 478


>ref|XP_002316931.1| predicted protein [Populus trichocarpa] gi|222859996|gb|EEE97543.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  129 bits (325), Expect = 3e-28
 Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 5/132 (3%)
 Frame = -2

Query: 628 GGVPKFPGNSQQSGSSGTDVPSQNWPNVGYQIPGMMMPIAGKTDLEKFMQ-----SQMGS 464
           GG  K  G+ QQ G +G ++P+QNWPN+GYQIPG+MMP+AG+ DL+K MQ      Q+G+
Sbjct: 364 GGDLKLSGSIQQQGPNGINIPAQNWPNMGYQIPGLMMPVAGQGDLQKLMQVHIMELQIGN 423

Query: 463 IGATFPVGNSVPFPVPGIYNMGQNASGNGVAPAPSGATKSQSAASLVPSTASSQKTGNDF 284
           IG T P G+++ +P    ++MGQ    NG     +GA+K+QSAA  V S  +  +TG D+
Sbjct: 424 IGLTHPGGSAIQYPPSSFFDMGQVNPANG--GTSTGASKTQSAAP-VSSGGTKMQTGKDY 480

Query: 283 DFSSLTQGMFSK 248
           DFSSLTQGMFSK
Sbjct: 481 DFSSLTQGMFSK 492


>ref|XP_002531044.1| Stromal membrane-associated protein, putative [Ricinus communis]
           gi|223529372|gb|EEF31337.1| Stromal membrane-associated
           protein, putative [Ricinus communis]
          Length = 482

 Score =  124 bits (312), Expect = 1e-26
 Identities = 65/125 (52%), Positives = 89/125 (71%), Gaps = 1/125 (0%)
 Frame = -2

Query: 619 PKFPGNSQQSGSSGTDVPSQNWPNVGYQIPGMMMPIA-GKTDLEKFMQSQMGSIGATFPV 443
           PKFPG  QQ+GS+G ++P+QNWPN+GYQIPG++MP+A G+ D  K +Q+  G+ G + PV
Sbjct: 363 PKFPGGIQQAGSNGINLPAQNWPNLGYQIPGLVMPVAGGQGDPRKLIQT--GNTGLSNPV 420

Query: 442 GNSVPFPVPGIYNMGQNASGNGVAPAPSGATKSQSAASLVPSTASSQKTGNDFDFSSLTQ 263
            +SVP+P    Y MGQ A  NGVA A  G +K QS A +  S+ +S ++  D+DFS+LTQ
Sbjct: 421 ASSVPYPTSSFYTMGQVAPVNGVATA--GMSKPQSTAPV--SSGTSSQSAKDYDFSALTQ 476

Query: 262 GMFSK 248
           G FSK
Sbjct: 477 GFFSK 481


>ref|XP_002330426.1| predicted protein [Populus trichocarpa] gi|222871811|gb|EEF08942.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  123 bits (309), Expect = 2e-26
 Identities = 62/128 (48%), Positives = 86/128 (67%)
 Frame = -2

Query: 631 SGGVPKFPGNSQQSGSSGTDVPSQNWPNVGYQIPGMMMPIAGKTDLEKFMQSQMGSIGAT 452
           +GG  K  G+ QQ G +G  +P+QNWPN+GYQIPG+MMP+AG+ DL+K  Q+    +G T
Sbjct: 356 AGGDQKLSGSIQQQGPNGISIPAQNWPNIGYQIPGLMMPVAGQGDLQKIKQT--ADMGLT 413

Query: 451 FPVGNSVPFPVPGIYNMGQNASGNGVAPAPSGATKSQSAASLVPSTASSQKTGNDFDFSS 272
            P G+SVP+P   +YN+ Q    NG     +G  K+QS++S+  S+ +S   G D+DFSS
Sbjct: 414 HPGGSSVPYPTSSLYNIEQVTPANG--GTNNGVGKTQSSSSV--SSGTSTPAGKDYDFSS 469

Query: 271 LTQGMFSK 248
           L QGMFSK
Sbjct: 470 LMQGMFSK 477


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