BLASTX nr result

ID: Panax21_contig00006366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006366
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248...   368   2e-99
ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|2...   340   5e-91
ref|XP_003541062.1| PREDICTED: polyadenylate-binding protein, cy...   338   1e-90
gb|AFC89654.1| RBP42 [Elaeis guineensis]                              335   1e-89
ref|XP_003527209.1| PREDICTED: polyadenylate-binding protein, cy...   332   7e-89

>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
           gi|147789426|emb|CAN66609.1| hypothetical protein
           VITISV_017556 [Vitis vinifera]
          Length = 449

 Score =  368 bits (944), Expect = 2e-99
 Identities = 205/332 (61%), Positives = 231/332 (69%), Gaps = 9/332 (2%)
 Frame = -3

Query: 969 MDLTKKRKLDENGLAVSDFE----LSIADARKIIEPFTHDQLLDIVQNAVLRHLDVLNAV 802
           MD TKKRK+DENGL  +D +    L+  DARKIIEPF HDQLL+I+QNA +RHLDVL+A+
Sbjct: 1   MDATKKRKMDENGLVSTDGDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRHLDVLDAI 60

Query: 801 RSIADRDPAQRKLFIRGLGWDTTNEKLASIFSTYGELEEAVVILDKTTGKSKGFGFVTFK 622
           RSIADRD  QRKLFIRGLGWDTT E L  +FS YGELEEAVVILDK T KSKG+GFVTFK
Sbjct: 61  RSIADRDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTFK 120

Query: 621 HIDGALRALKEPSKKIDGRMTVTNXXXXXXXXXXXXAPVQPQAMDVSMRKIYVANVPYDM 442
           H+DGAL ALKEPSKKIDGRMTVT                   A+DVSMRKIYVANVP DM
Sbjct: 121 HVDGALLALKEPSKKIDGRMTVTQLAASGLSGPAS----NASAVDVSMRKIYVANVPVDM 176

Query: 441 PGERLLAHFLSYGEIEEGPLGFDKATGKSKGFALFVYKTADAARASLVDPIKTIDGHQLN 262
           P +RLLAHF SYGEIEEGPLGFDK TGKS+GFALFVYKTA+AA+A+LVDP K IDG QL 
Sbjct: 177 PADRLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLV 236

Query: 261 CKLAIDGKRGKPPG----HVGVSAES-HGNGIGLLQTGVVPGSAAATQFXXXXXXXXXXX 97
           CKLAI+GK+GK  G      GV  E+ HG+G+G+   G +PGS  +              
Sbjct: 237 CKLAIEGKKGKTGGPAQAPTGVPGEAGHGDGLGVPPQGSMPGSLGS------QYPGGPGG 290

Query: 96  XXXXXXXXXXGPSPRSQHPLNSSFTSPGVGGP 1
                      P     HPLNSS  S   GGP
Sbjct: 291 ISAYGGFSGGPPPLGHHHPLNSSLPSSLGGGP 322


>ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|222847682|gb|EEE85229.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  340 bits (871), Expect = 5e-91
 Identities = 173/258 (67%), Positives = 204/258 (79%), Gaps = 8/258 (3%)
 Frame = -3

Query: 969 MDLTKKRKLDENGLAVSD------FELSIADARKIIEPFTHDQLLDIVQNAVLRHLDVLN 808
           MD TKKRKL+ENG+  S       ++L+  DARK++E FT DQLLDI+QNAV+RH D+L 
Sbjct: 1   MDPTKKRKLEENGIVSSTTDLDSPYKLTPQDARKMMERFTPDQLLDILQNAVVRHPDILE 60

Query: 807 AVRSIADRDPAQRKLFIRGLGWDTTNEKLASIFSTYGELEEAVVILDKTTGKSKGFGFVT 628
           AVRSIAD D  QRKLFIRGLGW+TT E L ++FSTYGELEEAVVILDK TGKSKG+GFV 
Sbjct: 61  AVRSIADPDATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFVI 120

Query: 627 FKHIDGALRALKEPSKKIDGRMTVTN--XXXXXXXXXXXXAPVQPQAMDVSMRKIYVANV 454
           +KH+DGAL ALKEPSKKIDGR+TVT               +   P  +DV+MRKIYVANV
Sbjct: 121 YKHVDGALLALKEPSKKIDGRVTVTQLAIAGNSGANNNNNSSANPGVVDVAMRKIYVANV 180

Query: 453 PYDMPGERLLAHFLSYGEIEEGPLGFDKATGKSKGFALFVYKTADAARASLVDPIKTIDG 274
           PY+MP ++LL HF  YGEIEEGPLGFDK TGKSKGFALFVYKTA+ A+A+L++P+K I+G
Sbjct: 181 PYEMPSDKLLNHFAQYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQAALLEPVKMIEG 240

Query: 273 HQLNCKLAIDGKRGKPPG 220
            QLNCKLAIDGKRG+ PG
Sbjct: 241 RQLNCKLAIDGKRGRQPG 258


>ref|XP_003541062.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Glycine max]
          Length = 437

 Score =  338 bits (868), Expect = 1e-90
 Identities = 186/333 (55%), Positives = 230/333 (69%), Gaps = 14/333 (4%)
 Frame = -3

Query: 969 MDLTKKRKLDENGLAVSD----FELSIADARKIIEPFTHDQLLDIVQNAVLRHLDVLNAV 802
           MD TKKRKLDENG   +D     +LS +DARK+IE FT DQLLDI+Q+ V RH DVL AV
Sbjct: 1   MDPTKKRKLDENGFINNDSSEPLKLSPSDARKLIERFTTDQLLDILQDTVARHPDVLAAV 60

Query: 801 RSIADRDPAQRKLFIRGLGWDTTNEKLASIFSTYGELEEAVVILDKTTGKSKGFGFVTFK 622
           R+++D D +QRKLFIRGLGWDTT + L S+FSTYG+LEEAVVILDK TGKSKG+GFVTF+
Sbjct: 61  RAVSDPDVSQRKLFIRGLGWDTTTDGLRSLFSTYGDLEEAVVILDKATGKSKGYGFVTFR 120

Query: 621 HIDGALRALKEPSKKIDGRMTVTNXXXXXXXXXXXXAPVQPQAMDVSMRKIYVANVPYDM 442
           H+DGAL AL+EPSK+IDGR+TVT             + +   A+DV++RKIYVANVP D+
Sbjct: 121 HVDGALLALREPSKRIDGRVTVTQ------LAAAGNSALNANAVDVALRKIYVANVPPDL 174

Query: 441 PGERLLAHFLSYGEIEEGPLGFDKATGKSKGFALFVYKTADAARASLVDPIKTIDGHQLN 262
           P ++LLAHF  YGEIEEGPLGFDK TGKSKGFALFVYK+ + A+A+L+DP+KT++G QL+
Sbjct: 175 PADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAKAALIDPMKTVEGRQLS 234

Query: 261 CKLAI-DGKRGKPPG------HVGVSAESHGNGIGLLQTGVVPGSAAAT---QFXXXXXX 112
           CKLAI DGK+GK  G      H G     HG+G+G    G+ P S + +   Q+      
Sbjct: 235 CKLAITDGKQGKRSGPDSGQAHHGNVQHGHGDGVG-AGMGIPPNSGSGSGPGQYGGPGHY 293

Query: 111 XXXXXXXXXXXXXXXGPSPRSQHPLNSSFTSPG 13
                           P   + HPLNSS   PG
Sbjct: 294 GPTVGMGSYGGFGGQPPMGNNNHPLNSSNPVPG 326


>gb|AFC89654.1| RBP42 [Elaeis guineensis]
          Length = 413

 Score =  335 bits (858), Expect = 1e-89
 Identities = 180/287 (62%), Positives = 208/287 (72%), Gaps = 16/287 (5%)
 Frame = -3

Query: 960 TKKRKLDENGLAV-SDFELSIADARKIIEPFTHDQLLDIVQNAVLRHLDVLNAVRSIADR 784
           +KKRK DENG  V S   L+  DARKI+EPFT + LLDIV+ A+ R   VL+AVR+IADR
Sbjct: 5   SKKRKSDENGAVVASPALLTPEDARKIVEPFTREHLLDIVREAMCRDAGVLDAVRAIADR 64

Query: 783 DPAQRKLFIRGLGWDTTNEKLASIFSTYGELEEAVVILDKTTGKSKGFGFVTFKHIDGAL 604
           DPAQRKLFIRGLGW+TT E L ++FS+YGELEEAVVI+DK TGKSKG+GF+TF+HIDGAL
Sbjct: 65  DPAQRKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKATGKSKGYGFITFRHIDGAL 124

Query: 603 RALKEPSKKIDGRMTVTNXXXXXXXXXXXXAPVQPQAMDVSMRKIYVANVPYDMPGERLL 424
            ALKEPSKKIDGRMTVT                 P A+DVS+RKIYV NVP DMP +RLL
Sbjct: 125 LALKEPSKKIDGRMTVTQ------LAAAGTTAAAPPAIDVSLRKIYVGNVPADMPSDRLL 178

Query: 423 AHFLSYGEIEEGPLGFDKATGKSKGFALFVYKTADAARASLVDPIKTIDGHQLNCKLAID 244
           AHF SYGEIEEGPLGFDK TGK +GFALFVYKTA+ A ASLVDP K IDGH L CKLAID
Sbjct: 179 AHFSSYGEIEEGPLGFDKQTGKFRGFALFVYKTAEGAGASLVDPTKNIDGHHLVCKLAID 238

Query: 243 GKRGKPPG---------------HVGVSAESHGNGIGLLQTGVVPGS 148
           GK+ KP                  +G  A+  G+G+G+     +PGS
Sbjct: 239 GKKVKPGAPAAGAAAPVGGVQGQRMGGGADIGGDGLGMGHQSSLPGS 285


>ref|XP_003527209.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Glycine max]
          Length = 425

 Score =  332 bits (852), Expect = 7e-89
 Identities = 185/331 (55%), Positives = 227/331 (68%), Gaps = 12/331 (3%)
 Frame = -3

Query: 969 MDLTKKRKLDENGLAVSD----FELSIADARKIIEPFTHDQLLDIVQNAVLRHLDVLNAV 802
           MD TKKRKLDENG   +D     +LS ++ RK+IE FT DQLLDI+Q+AV RHLDVL AV
Sbjct: 1   MDPTKKRKLDENGFNNNDSSDPLKLSPSEVRKLIERFTSDQLLDILQDAVARHLDVLAAV 60

Query: 801 RSIADRDPAQRKLFIRGLGWDTTNEKLASIFSTYGELEEAVVILDKTTGKSKGFGFVTFK 622
           R++AD D +QRKLFIRGLGWDTT + L S+FST+G+LEEAVVILDK TGKSKG+GFVTF+
Sbjct: 61  RAVADPDVSQRKLFIRGLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYGFVTFR 120

Query: 621 HIDGALRALKEPSKKIDGRMTVTNXXXXXXXXXXXXAPVQPQAMDVSMRKIYVANVPYDM 442
           H+DGAL AL+EPSK+IDGR+TVT               V P   DV++RKIYVANVP D+
Sbjct: 121 HVDGALLALREPSKRIDGRVTVTQLAAAGNSASN----VNP--ADVALRKIYVANVPPDL 174

Query: 441 PGERLLAHFLSYGEIEEGPLGFDKATGKSKGFALFVYKTADAARASLVDPIKTIDGHQLN 262
           P ++LLAHF  YGEIEEGPLGFDK TGKSKGFALFVYK+ + A+A+L+DP+KT++G QL+
Sbjct: 175 PADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAQAALIDPVKTVEGRQLS 234

Query: 261 CKLAI-DGKRGKPPG------HVGVSAESHGNGIGLLQTGVVPGSAAAT-QFXXXXXXXX 106
           CKLAI DGK+GK  G      H G     HG+G+G    G+ P + +   Q+        
Sbjct: 235 CKLAITDGKQGKRVGPDSAQAHHGNVQHGHGDGVG-AGMGMPPNAGSGPGQYGGPGQYGP 293

Query: 105 XXXXXXXXXXXXXGPSPRSQHPLNSSFTSPG 13
                         P     HPLNS+   PG
Sbjct: 294 PVGMGSYGGFGGQPPMGNHNHPLNSTNPVPG 324


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