BLASTX nr result

ID: Panax21_contig00006364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006364
         (1760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537887.1| PREDICTED: ATP-dependent Clp protease proteo...   370   e-100
gb|AFK45588.1| unknown [Lotus japonicus]                              367   4e-99
gb|ACU18559.1| unknown [Glycine max]                                  366   1e-98
ref|XP_004148854.1| PREDICTED: ATP-dependent Clp protease proteo...   364   5e-98
gb|AFK48167.1| unknown [Lotus japonicus]                              362   1e-97

>ref|XP_003537887.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like [Glycine max]
          Length = 273

 Score =  370 bits (949), Expect = e-100
 Identities = 190/247 (76%), Positives = 206/247 (83%)
 Frame = +1

Query: 103 HRNLNKSIVSAFPSPYGDXXXXXXXXXXHGLRLKIDEKESLAIANPSYGPIEARKGNPPV 282
           HRN   SI S+ P+PYG            G  LK+DEK ++  A+ SYG IEA KGNPP+
Sbjct: 30  HRN-PCSIASSLPNPYGHSSGVGLSSKSRGFPLKLDEK-NIHGASTSYGAIEA-KGNPPI 86

Query: 283 IPAVLTPGGPLDLSTVLFRNRIIFIGQPVNAQVAQRVISQLVTLATIDEDADILVYLNCP 462
            PAV+TPGGPLDLS+VLFRNRIIFIGQPVN+QVAQRVISQLVTLATIDE+ADILVY+NCP
Sbjct: 87  TPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENADILVYINCP 146

Query: 463 GGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYSMPNSRIMIHQPQS 642
           GGSTYSVLAIYDCMSWIKPKVGTVCF              EKGMRY+MPN+RIMIHQPQS
Sbjct: 147 GGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIMIHQPQS 206

Query: 643 GCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPLEKVQQYTERDRFLSVSEAIEFGLID 822
           GCGGHVEDVRRQVNEAVQSRHKIDKMY+ FTGQPLEKVQQYTERDRFLSVSEA+EFGLID
Sbjct: 207 GCGGHVEDVRRQVNEAVQSRHKIDKMYSVFTGQPLEKVQQYTERDRFLSVSEALEFGLID 266

Query: 823 GVLETEY 843
           GVLETEY
Sbjct: 267 GVLETEY 273


>gb|AFK45588.1| unknown [Lotus japonicus]
          Length = 275

 Score =  367 bits (943), Expect = 4e-99
 Identities = 190/248 (76%), Positives = 204/248 (82%), Gaps = 1/248 (0%)
 Frame = +1

Query: 103 HRNLNKSIVSAFPSPYGDXXXXXXXXXXH-GLRLKIDEKESLAIANPSYGPIEARKGNPP 279
           HRNL + I S   SPYG             G  LK+DEK +   A+ SYG IEA+KGNPP
Sbjct: 30  HRNLCQ-IASNLSSPYGGHSSKFGLSSKSPGFPLKLDEKNTYD-ASTSYGAIEAKKGNPP 87

Query: 280 VIPAVLTPGGPLDLSTVLFRNRIIFIGQPVNAQVAQRVISQLVTLATIDEDADILVYLNC 459
           + PAV+TPGGPLDLS+VLFRNRIIFIGQPVNAQVAQRVISQLVTLATID +ADIL+Y+NC
Sbjct: 88  ITPAVMTPGGPLDLSSVLFRNRIIFIGQPVNAQVAQRVISQLVTLATIDPNADILMYINC 147

Query: 460 PGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYSMPNSRIMIHQPQ 639
           PGGSTYSVLAIYDCMSWIKPKVGTVCF              EKGMRYSMPNSRIMIHQPQ
Sbjct: 148 PGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYSMPNSRIMIHQPQ 207

Query: 640 SGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPLEKVQQYTERDRFLSVSEAIEFGLI 819
           SGCGGHVEDVRRQVNEAVQSRHKIDKMY+AFTGQP+EKVQQYTERD FLSVSEA+EFGLI
Sbjct: 208 SGCGGHVEDVRRQVNEAVQSRHKIDKMYSAFTGQPIEKVQQYTERDHFLSVSEALEFGLI 267

Query: 820 DGVLETEY 843
           DGVLETEY
Sbjct: 268 DGVLETEY 275


>gb|ACU18559.1| unknown [Glycine max]
          Length = 273

 Score =  366 bits (939), Expect = 1e-98
 Identities = 188/247 (76%), Positives = 204/247 (82%)
 Frame = +1

Query: 103 HRNLNKSIVSAFPSPYGDXXXXXXXXXXHGLRLKIDEKESLAIANPSYGPIEARKGNPPV 282
           HRN   SI S+ P+PYG            G  LK+DEK ++  A+ SYG IEA KGNPP+
Sbjct: 30  HRN-PCSIASSLPNPYGHSSGVGLSSKSRGFPLKLDEK-NIHGASTSYGAIEA-KGNPPI 86

Query: 283 IPAVLTPGGPLDLSTVLFRNRIIFIGQPVNAQVAQRVISQLVTLATIDEDADILVYLNCP 462
            PAV+TPGGPLDLS+VLFRNRIIFIGQPVN+QVAQRVISQLVTLATIDE+ADILVY+NCP
Sbjct: 87  TPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENADILVYINCP 146

Query: 463 GGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYSMPNSRIMIHQPQS 642
           GGSTYSVLAIYDCMSWIKPKVGTVCF              EKGMRY+MPN+RIMIHQPQS
Sbjct: 147 GGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIMIHQPQS 206

Query: 643 GCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPLEKVQQYTERDRFLSVSEAIEFGLID 822
           GCGGHVEDVRRQVNEAVQSRHKIDKMY+ FTGQPLEKVQQYTERDRFLSV EA+EFG ID
Sbjct: 207 GCGGHVEDVRRQVNEAVQSRHKIDKMYSVFTGQPLEKVQQYTERDRFLSVFEALEFGFID 266

Query: 823 GVLETEY 843
           GVLETEY
Sbjct: 267 GVLETEY 273


>ref|XP_004148854.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like [Cucumis sativus]
           gi|449515355|ref|XP_004164715.1| PREDICTED:
           ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like [Cucumis sativus]
          Length = 274

 Score =  364 bits (934), Expect = 5e-98
 Identities = 182/246 (73%), Positives = 204/246 (82%)
 Frame = +1

Query: 106 RNLNKSIVSAFPSPYGDXXXXXXXXXXHGLRLKIDEKESLAIANPSYGPIEARKGNPPVI 285
           RN ++SIVSAFP PYGD          +G  L +D+K+ L  +  SY PI AR+ NPPV+
Sbjct: 30  RNSHRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFLRTST-SYEPIVARRDNPPVM 88

Query: 286 PAVLTPGGPLDLSTVLFRNRIIFIGQPVNAQVAQRVISQLVTLATIDEDADILVYLNCPG 465
           PAV+TPGGPLDLS+VLFRNRIIFIGQP+N+ VAQRVISQLVTLATIDEDADILVYLNCPG
Sbjct: 89  PAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADILVYLNCPG 148

Query: 466 GSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYSMPNSRIMIHQPQSG 645
           GSTYS+LAIYDCMSWIKPKVGTVCF              EKGMRY+MPNSRIMIHQPQSG
Sbjct: 149 GSTYSILAIYDCMSWIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSG 208

Query: 646 CGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPLEKVQQYTERDRFLSVSEAIEFGLIDG 825
           CGG VEDVRRQVNEAVQSR+KI+KMYAAFTGQ +E +QQY +RDRFLSVSEA++FGLIDG
Sbjct: 209 CGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDG 268

Query: 826 VLETEY 843
           VLETEY
Sbjct: 269 VLETEY 274


>gb|AFK48167.1| unknown [Lotus japonicus]
          Length = 275

 Score =  362 bits (930), Expect = 1e-97
 Identities = 188/248 (75%), Positives = 203/248 (81%), Gaps = 1/248 (0%)
 Frame = +1

Query: 103 HRNLNKSIVSAFPSPYGDXXXXXXXXXXH-GLRLKIDEKESLAIANPSYGPIEARKGNPP 279
           HRNL + I S   SPYG             G  LK+DEK +   A+ SYG IEA+KGNPP
Sbjct: 30  HRNLCQ-IASNLSSPYGGHSSKFGLSSKSPGFPLKLDEKNTYD-ASTSYGAIEAKKGNPP 87

Query: 280 VIPAVLTPGGPLDLSTVLFRNRIIFIGQPVNAQVAQRVISQLVTLATIDEDADILVYLNC 459
           + PAV+TPGGPLDLS+VLFRNRIIFIGQPVNAQVAQRV+SQLVTLATI  +ADIL+Y+NC
Sbjct: 88  ITPAVMTPGGPLDLSSVLFRNRIIFIGQPVNAQVAQRVVSQLVTLATIYPNADILMYINC 147

Query: 460 PGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYSMPNSRIMIHQPQ 639
           PGGSTYSVLAIYDCMSWIKPKVGTVC               EKGMRYSMPNSRIMIHQPQ
Sbjct: 148 PGGSTYSVLAIYDCMSWIKPKVGTVCSGVAASQGALLLAGGEKGMRYSMPNSRIMIHQPQ 207

Query: 640 SGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPLEKVQQYTERDRFLSVSEAIEFGLI 819
           SGCGGHVEDVRRQVNEAVQSRHKIDKMY+AFTGQP+EKVQQYTERDRFLSVSEA+EFGLI
Sbjct: 208 SGCGGHVEDVRRQVNEAVQSRHKIDKMYSAFTGQPIEKVQQYTERDRFLSVSEALEFGLI 267

Query: 820 DGVLETEY 843
           DGVLETEY
Sbjct: 268 DGVLETEY 275


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