BLASTX nr result

ID: Panax21_contig00006363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006363
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC06126.1| putative ATP-dependent clp serine protease prote...   138   5e-31
ref|XP_003631636.1| PREDICTED: ATP-dependent Clp protease proteo...   137   1e-30
gb|AFK45588.1| unknown [Lotus japonicus]                              136   2e-30
ref|XP_003606881.1| ATP-dependent Clp protease proteolytic subun...   135   5e-30
ref|XP_003606880.1| ATP-dependent Clp protease proteolytic subun...   135   5e-30

>emb|CAC06126.1| putative ATP-dependent clp serine protease proteolytic subunit
           [Pisum sativum]
          Length = 246

 Score =  138 bits (347), Expect = 5e-31
 Identities = 72/98 (73%), Positives = 82/98 (83%)
 Frame = +2

Query: 86  LHNLFIGFSSISHGLRLKLDEKESLAIANPSYGPIEAKKGNPAVMPAVMTPGGPLDLSTV 265
           +H+  IG SS +HG RLK DEK +  ++  SYG IEAKKGNP + PAVMTPGG +DLS+V
Sbjct: 39  VHSSKIGLSSKAHGFRLKFDEKNTHDVST-SYGVIEAKKGNPPISPAVMTPGGAIDLSSV 97

Query: 266 LFRNRIIFIGQPINAQVAQRVISQLVTLATIDEDADIL 379
           LFRNRIIFIGQPINAQ+AQRVISQLVTLATID DADIL
Sbjct: 98  LFRNRIIFIGQPINAQMAQRVISQLVTLATIDPDADIL 135


>ref|XP_003631636.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like [Vitis vinifera]
           gi|297741435|emb|CBI32566.3| unnamed protein product
           [Vitis vinifera]
          Length = 269

 Score =  137 bits (344), Expect = 1e-30
 Identities = 73/93 (78%), Positives = 79/93 (84%)
 Frame = +2

Query: 101 IGFSSISHGLRLKLDEKESLAIANPSYGPIEAKKGNPAVMPAVMTPGGPLDLSTVLFRNR 280
           IG SS + GL LK+DE+   A  NPSYG IEAKKGNP V P+VMTPGGPLDLSTVLFR+R
Sbjct: 45  IGLSSKTSGLSLKVDERGRHA-GNPSYGAIEAKKGNPPVAPSVMTPGGPLDLSTVLFRSR 103

Query: 281 IIFIGQPINAQVAQRVISQLVTLATIDEDADIL 379
           IIFIGQPIN+ VAQRVISQLVTLA IDEDADIL
Sbjct: 104 IIFIGQPINSMVAQRVISQLVTLAAIDEDADIL 136


>gb|AFK45588.1| unknown [Lotus japonicus]
          Length = 275

 Score =  136 bits (342), Expect = 2e-30
 Identities = 73/97 (75%), Positives = 80/97 (82%)
 Frame = +2

Query: 89  HNLFIGFSSISHGLRLKLDEKESLAIANPSYGPIEAKKGNPAVMPAVMTPGGPLDLSTVL 268
           H+   G SS S G  LKLDEK +   A+ SYG IEAKKGNP + PAVMTPGGPLDLS+VL
Sbjct: 47  HSSKFGLSSKSPGFPLKLDEKNTYD-ASTSYGAIEAKKGNPPITPAVMTPGGPLDLSSVL 105

Query: 269 FRNRIIFIGQPINAQVAQRVISQLVTLATIDEDADIL 379
           FRNRIIFIGQP+NAQVAQRVISQLVTLATID +ADIL
Sbjct: 106 FRNRIIFIGQPVNAQVAQRVISQLVTLATIDPNADIL 142


>ref|XP_003606881.1| ATP-dependent Clp protease proteolytic subunit [Medicago
           truncatula] gi|355507936|gb|AES89078.1| ATP-dependent
           Clp protease proteolytic subunit [Medicago truncatula]
          Length = 237

 Score =  135 bits (339), Expect = 5e-30
 Identities = 70/93 (75%), Positives = 78/93 (83%)
 Frame = +2

Query: 101 IGFSSISHGLRLKLDEKESLAIANPSYGPIEAKKGNPAVMPAVMTPGGPLDLSTVLFRNR 280
           IG SS +HG RLKLDEK +  +   SYG IEAK GNP + PA+MTPGG LDLS+VLFRNR
Sbjct: 50  IGLSSKTHGFRLKLDEKSTHDVGT-SYGVIEAKTGNPPITPAIMTPGGALDLSSVLFRNR 108

Query: 281 IIFIGQPINAQVAQRVISQLVTLATIDEDADIL 379
           IIFIGQP+N+QVAQRVISQLVTLATID DADIL
Sbjct: 109 IIFIGQPVNSQVAQRVISQLVTLATIDPDADIL 141


>ref|XP_003606880.1| ATP-dependent Clp protease proteolytic subunit [Medicago
           truncatula] gi|355507935|gb|AES89077.1| ATP-dependent
           Clp protease proteolytic subunit [Medicago truncatula]
           gi|388499646|gb|AFK37889.1| unknown [Medicago
           truncatula]
          Length = 274

 Score =  135 bits (339), Expect = 5e-30
 Identities = 70/93 (75%), Positives = 78/93 (83%)
 Frame = +2

Query: 101 IGFSSISHGLRLKLDEKESLAIANPSYGPIEAKKGNPAVMPAVMTPGGPLDLSTVLFRNR 280
           IG SS +HG RLKLDEK +  +   SYG IEAK GNP + PA+MTPGG LDLS+VLFRNR
Sbjct: 50  IGLSSKTHGFRLKLDEKSTHDVGT-SYGVIEAKTGNPPITPAIMTPGGALDLSSVLFRNR 108

Query: 281 IIFIGQPINAQVAQRVISQLVTLATIDEDADIL 379
           IIFIGQP+N+QVAQRVISQLVTLATID DADIL
Sbjct: 109 IIFIGQPVNSQVAQRVISQLVTLATIDPDADIL 141


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