BLASTX nr result

ID: Panax21_contig00006343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006343
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46765.1| unknown [Solanum tuberosum]                             86   4e-15
gb|AAR83860.1| putative ribosomal protein [Capsicum annuum]            86   4e-15
ref|XP_004140957.1| PREDICTED: 40S ribosomal protein S18-like [C...    84   2e-14
ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [C...    84   2e-14
gb|AAK43840.1|AF370463_1 S18.A ribosomal protein [Arabidopsis th...    84   2e-14

>gb|ABA46765.1| unknown [Solanum tuberosum]
          Length = 152

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/55 (76%), Positives = 42/55 (76%)
 Frame = +1

Query: 1   VTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 165
           VTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             SKKR
Sbjct: 98  VTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


>gb|AAR83860.1| putative ribosomal protein [Capsicum annuum]
          Length = 152

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/55 (76%), Positives = 42/55 (76%)
 Frame = +1

Query: 1   VTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 165
           VTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             SKKR
Sbjct: 98  VTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


>ref|XP_004140957.1| PREDICTED: 40S ribosomal protein S18-like [Cucumis sativus]
          Length = 137

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/55 (74%), Positives = 41/55 (74%)
 Frame = +1

Query: 1   VTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 165
           V SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             SKKR
Sbjct: 83  VVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 137


>ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [Cucumis sativus]
           gi|449525091|ref|XP_004169553.1| PREDICTED: 40S
           ribosomal protein S18-like [Cucumis sativus]
          Length = 152

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/55 (74%), Positives = 41/55 (74%)
 Frame = +1

Query: 1   VTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 165
           V SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             SKKR
Sbjct: 98  VVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


>gb|AAK43840.1|AF370463_1 S18.A ribosomal protein [Arabidopsis thaliana]
           gi|17978783|gb|AAL47385.1| S18.A ribosomal protein
           [Arabidopsis thaliana]
          Length = 152

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/55 (74%), Positives = 41/55 (74%)
 Frame = +1

Query: 1   VTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 165
           V SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             SKKR
Sbjct: 98  VVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


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