BLASTX nr result

ID: Panax21_contig00006342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006342
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [C...   116   5e-24
gb|ADR71282.1| 40S ribosomal protein S18C [Hevea brasiliensis]        116   5e-24
ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus...   116   5e-24
ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus...   116   5e-24
gb|AAR83860.1| putative ribosomal protein [Capsicum annuum]           116   5e-24

>ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [Cucumis sativus]
           gi|449525091|ref|XP_004169553.1| PREDICTED: 40S
           ribosomal protein S18-like [Cucumis sativus]
          Length = 152

 Score =  116 bits (290), Expect = 5e-24
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = +1

Query: 121 MSLVANEDFQHILRVQNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL 297
           MSLVANEDFQHILRV NTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL 59



 Score =  101 bits (252), Expect = 1e-19
 Identities = 49/64 (76%), Positives = 50/64 (78%)
 Frame = +3

Query: 435 DYKDGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXX 614
           DYKDGK+SQV SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             
Sbjct: 89  DYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGV 148

Query: 615 SKKR 626
           SKKR
Sbjct: 149 SKKR 152


>gb|ADR71282.1| 40S ribosomal protein S18C [Hevea brasiliensis]
          Length = 152

 Score =  116 bits (290), Expect = 5e-24
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = +1

Query: 121 MSLVANEDFQHILRVQNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL 297
           MSLVANEDFQHILRV NTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL 59



 Score =  100 bits (248), Expect = 4e-19
 Identities = 48/64 (75%), Positives = 49/64 (76%)
 Frame = +3

Query: 435 DYKDGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXX 614
           DYKDGK+SQV SNALDMKLRDDLERLKKIRNHRG RHYWGLRVRGQH             
Sbjct: 89  DYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGFRHYWGLRVRGQHTKTPGRRGKTVGV 148

Query: 615 SKKR 626
           SKKR
Sbjct: 149 SKKR 152


>ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus communis]
           gi|223540104|gb|EEF41681.1| 40S ribosomal protein S18,
           putative [Ricinus communis] gi|313586541|gb|ADR71281.1|
           40S ribosomal protein S18A [Hevea brasiliensis]
          Length = 152

 Score =  116 bits (290), Expect = 5e-24
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = +1

Query: 121 MSLVANEDFQHILRVQNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL 297
           MSLVANEDFQHILRV NTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL 59



 Score =  101 bits (252), Expect = 1e-19
 Identities = 49/64 (76%), Positives = 50/64 (78%)
 Frame = +3

Query: 435 DYKDGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXX 614
           DYKDGK+SQV SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             
Sbjct: 89  DYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGV 148

Query: 615 SKKR 626
           SKKR
Sbjct: 149 SKKR 152


>ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus communis]
           gi|223536431|gb|EEF38080.1| 40S ribosomal protein S18,
           putative [Ricinus communis]
          Length = 152

 Score =  116 bits (290), Expect = 5e-24
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = +1

Query: 121 MSLVANEDFQHILRVQNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL 297
           MSLVANEDFQHILRV NTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL 59



 Score =  101 bits (252), Expect = 1e-19
 Identities = 49/64 (76%), Positives = 50/64 (78%)
 Frame = +3

Query: 435 DYKDGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXX 614
           DYKDGK+SQV SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             
Sbjct: 89  DYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGV 148

Query: 615 SKKR 626
           SKKR
Sbjct: 149 SKKR 152


>gb|AAR83860.1| putative ribosomal protein [Capsicum annuum]
          Length = 152

 Score =  116 bits (290), Expect = 5e-24
 Identities = 56/59 (94%), Positives = 58/59 (98%)
 Frame = +1

Query: 121 MSLVANEDFQHILRVQNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL 297
           MSLVANEDFQHILRVQNTNVDGKQKIMFA+TSIKGIGRRFANI CKKAD+DMNKRAGEL
Sbjct: 1   MSLVANEDFQHILRVQNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADIDMNKRAGEL 59



 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/64 (79%), Positives = 51/64 (79%)
 Frame = +3

Query: 435 DYKDGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXX 614
           DYKDGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH             
Sbjct: 89  DYKDGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGV 148

Query: 615 SKKR 626
           SKKR
Sbjct: 149 SKKR 152


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