BLASTX nr result

ID: Panax21_contig00006334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006334
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276879.2| PREDICTED: uncharacterized protein LOC100243...    86   3e-15
emb|CBI26715.3| unnamed protein product [Vitis vinifera]               86   3e-15
emb|CAN61366.1| hypothetical protein VITISV_020586 [Vitis vinifera]    86   3e-15
ref|XP_002300345.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>ref|XP_002276879.2| PREDICTED: uncharacterized protein LOC100243584 [Vitis vinifera]
          Length = 1260

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 68/189 (35%), Positives = 91/189 (48%), Gaps = 50/189 (26%)
 Frame = -2

Query: 538  GSVSGSYQFRGAGYTAGTREDEMARRYVSAIGDPYQSSTNR------------NRFSEEQ 395
            G    S Q  G G +  +  ++MARRY     +P+ S+ +R             R SEE 
Sbjct: 1046 GVPDSSLQRTGYGGSHASIPEDMARRYRLDSEEPFSSTIHRWSTGVSPGLDYGIRNSEEP 1105

Query: 394  ISGYHQREIVENRGYMYDL--------------------------PSQRSSYLDGHNPR- 296
             + Y  R  ++N GY + +                           SQRS+YL G +PR 
Sbjct: 1106 FTSY-MRGSIDNLGYRHSIRDRDEYGRNADIRSQVQSYGLHDPIGMSQRSNYLAGQDPRF 1164

Query: 295  -----VPTPYGNLGGSVPDPSYS---TSTMQRYAPRLDELNYSRMNSL---RSEPPRSGV 149
                  P+ YG+  GS  + SYS   TS MQRYAP+LDELN++RMNS    R  P R+ +
Sbjct: 1165 GQMGSFPSTYGH-PGSGAESSYSRMNTSAMQRYAPQLDELNHTRMNSFGYERPMPIRNNI 1223

Query: 148  YDPLAPPRP 122
            YDPLAPPRP
Sbjct: 1224 YDPLAPPRP 1232


>emb|CBI26715.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 68/189 (35%), Positives = 91/189 (48%), Gaps = 50/189 (26%)
 Frame = -2

Query: 538  GSVSGSYQFRGAGYTAGTREDEMARRYVSAIGDPYQSSTNR------------NRFSEEQ 395
            G    S Q  G G +  +  ++MARRY     +P+ S+ +R             R SEE 
Sbjct: 987  GVPDSSLQRTGYGGSHASIPEDMARRYRLDSEEPFSSTIHRWSTGVSPGLDYGIRNSEEP 1046

Query: 394  ISGYHQREIVENRGYMYDL--------------------------PSQRSSYLDGHNPR- 296
             + Y  R  ++N GY + +                           SQRS+YL G +PR 
Sbjct: 1047 FTSY-MRGSIDNLGYRHSIRDRDEYGRNADIRSQVQSYGLHDPIGMSQRSNYLAGQDPRF 1105

Query: 295  -----VPTPYGNLGGSVPDPSYS---TSTMQRYAPRLDELNYSRMNSL---RSEPPRSGV 149
                  P+ YG+  GS  + SYS   TS MQRYAP+LDELN++RMNS    R  P R+ +
Sbjct: 1106 GQMGSFPSTYGH-PGSGAESSYSRMNTSAMQRYAPQLDELNHTRMNSFGYERPMPIRNNI 1164

Query: 148  YDPLAPPRP 122
            YDPLAPPRP
Sbjct: 1165 YDPLAPPRP 1173


>emb|CAN61366.1| hypothetical protein VITISV_020586 [Vitis vinifera]
          Length = 2238

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 68/189 (35%), Positives = 91/189 (48%), Gaps = 50/189 (26%)
 Frame = -2

Query: 538  GSVSGSYQFRGAGYTAGTREDEMARRYVSAIGDPYQSSTNR------------NRFSEEQ 395
            G    S Q  G G +  +  ++MARRY     +P+ S+ +R             R SEE 
Sbjct: 1691 GVPDSSLQRTGYGGSHASIPEDMARRYRLDSEEPFSSTIHRWSTGVSPGLDYGIRNSEEP 1750

Query: 394  ISGYHQREIVENRGYMYDL--------------------------PSQRSSYLDGHNPR- 296
             + Y  R  ++N GY + +                           SQRS+YL G +PR 
Sbjct: 1751 FTSY-MRGSIDNLGYRHSIRDRDEYGRNADIRSQVQSYGLHDPIGMSQRSNYLAGQDPRF 1809

Query: 295  -----VPTPYGNLGGSVPDPSYS---TSTMQRYAPRLDELNYSRMNSL---RSEPPRSGV 149
                  P+ YG+  GS  + SYS   TS MQRYAP+LDELN++RMNS    R  P R+ +
Sbjct: 1810 GQMGSFPSTYGH-PGSGAESSYSRMNTSAMQRYAPQLDELNHTRMNSFGYERPMPIRNNI 1868

Query: 148  YDPLAPPRP 122
            YDPLAPPRP
Sbjct: 1869 YDPLAPPRP 1877


>ref|XP_002300345.1| predicted protein [Populus trichocarpa] gi|222847603|gb|EEE85150.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 58/164 (35%), Positives = 82/164 (50%), Gaps = 23/164 (14%)
 Frame = -2

Query: 553 YQQFDGSVSGSYQFRGA---GYTAGTREDEMARRYVSAIGDPYQSS----TNRNRFSEEQ 395
           YQ  D S S SY  + A   G +  +  D+M RR+ + I + Y  +    ++     E+ 
Sbjct: 391 YQHLDPSFSDSYSQQHATPYGGSWASNHDDMNRRHCTNIHESYSLNIHGLSSGGNMEEQS 450

Query: 394 ISGYHQREIVEN-RGYMYDLP---SQRSSYLDGH-------NPRVPTPYGNLGGSVPDPS 248
               +  E V   + ++Y L    S R +Y  G         P    PYG++G S  +P 
Sbjct: 451 TRCMNGTEFVRQPQVHLYGLQGADSARWNYPSGRYLGYGHMEPAPAIPYGHMG-SASEPP 509

Query: 247 Y--STSTMQRYAPRLDELNYSRMNSLRSEPP---RSGVYDPLAP 131
           Y  + S MQRYAPRLDELN++RM+SL  EP    R+G YDP AP
Sbjct: 510 YMMNMSAMQRYAPRLDELNHTRMSSLGPEPSMLNRNGSYDPRAP 553


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