BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006330
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ri...   320   6e-85
ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|2...   317   3e-84
ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloropl...   317   5e-84
ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloropl...   316   6e-84
gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]      316   6e-84

>ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223547691|gb|EEF49184.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 256

 Score =  320 bits (819), Expect = 6e-85
 Identities = 177/259 (68%), Positives = 199/259 (76%), Gaps = 2/259 (0%)
 Frame = +3

Query: 135 KMATFSSILSPNFLQNYPLTKSPMTQQSQLSKLSIQTFQSHPFQISHKFSLSPLREPRRV 314
           K   F+++  P FL        P T     SK S      +P            R PRR+
Sbjct: 16  KFTLFTNLPKPTFL-----ILKPTTHFINFSKFSHLDVVLNP------------RVPRRL 58

Query: 315 SAAVAEETAVLTQ--DPSSEAARRLYVGNIPRTVNNDELQKIVQEHGAVEKVEVMYDKYS 488
            A VAEE A +    DPSSEAA+RLY+GNIPRTV+NDEL KIV+EHGAVEK EVMYDKYS
Sbjct: 59  FA-VAEEAAPVAPPPDPSSEAAKRLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMYDKYS 117

Query: 489 GRSRRFAFVTMKTVEDANAVIEKLNGTEIGERQIKVNVTEKPLSISDFSLLQAEESQFVD 668
           GRSRRFAFVTM+TVEDANAVIEKLNGT+IG R+IKVN+TEKPL+  D S LQ EESQFVD
Sbjct: 118 GRSRRFAFVTMRTVEDANAVIEKLNGTQIGGREIKVNITEKPLASGDLSFLQLEESQFVD 177

Query: 669 SPYKVYVGNLAKEVTSDTLKDFFAEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVETA 848
           SP+KVYVGNLAK VTS+ LK+FF+EKGKVLSAKVSRVPGTSKSSGYGFV+FS EEDVE A
Sbjct: 178 SPHKVYVGNLAKTVTSEILKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVSFSEEEDVEAA 237

Query: 849 VSSFNNALLEGQKIRVNKA 905
           +SSFNN+LLEGQKIRVNKA
Sbjct: 238 ISSFNNSLLEGQKIRVNKA 256


>ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|222850427|gb|EEE87974.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  317 bits (813), Expect = 3e-84
 Identities = 177/262 (67%), Positives = 204/262 (77%), Gaps = 6/262 (2%)
 Frame = +3

Query: 138 MATFSSILSPNFLQNYPLTKSPMTQQSQLSKLSIQTFQ-SHPF----QISHKFSLSPLRE 302
           MAT SS+ +P      P T + +      SK S Q  + ++PF    + +H   +   + 
Sbjct: 1   MATISSLTTP-----LP-TSTKLALSRNQSKPSFQILKPANPFNHFPKFTHLHKILNTKA 54

Query: 303 PRRVSAAVAEETA-VLTQDPSSEAARRLYVGNIPRTVNNDELQKIVQEHGAVEKVEVMYD 479
           P+R+ A VAEETA     DPSSEAARRLYVGNIPRT+ N+EL KIV+EHGAVEK EVMYD
Sbjct: 55  PQRLFA-VAEETAPAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYD 113

Query: 480 KYSGRSRRFAFVTMKTVEDANAVIEKLNGTEIGERQIKVNVTEKPLSISDFSLLQAEESQ 659
           KYSGRSRRFAFVTMKT EDANA IEKLNGTEIG R+IKVN+TEKPL   D   LQ++ESQ
Sbjct: 114 KYSGRSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDESQ 173

Query: 660 FVDSPYKVYVGNLAKEVTSDTLKDFFAEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDV 839
           FVDSPYKVYVGNLAK V +DTLK+FF++KG VLSAKVSRVPGTSKSSG+GFVTFSSEEDV
Sbjct: 174 FVDSPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDV 233

Query: 840 ETAVSSFNNALLEGQKIRVNKA 905
           E A+SSFNN+LLEGQ IRVNKA
Sbjct: 234 EVAISSFNNSLLEGQPIRVNKA 255


>ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
           max]
          Length = 246

 Score =  317 bits (811), Expect = 5e-84
 Identities = 175/254 (68%), Positives = 196/254 (77%), Gaps = 2/254 (0%)
 Frame = +3

Query: 150 SSILSPNFLQNYPLTKSPMTQQSQLSKLSIQTFQSHPFQIS--HKFSLSPLREPRRVSAA 323
           S +L+ NFL    LT    +    L  + + T    P  ++  H F   P        AA
Sbjct: 7   SFLLTSNFLS---LTTPSSSSTHVLFPMRLSTTHLRPLLLTTRHGFGRPPF-------AA 56

Query: 324 VAEETAVLTQDPSSEAARRLYVGNIPRTVNNDELQKIVQEHGAVEKVEVMYDKYSGRSRR 503
           VAE+ A  T+     +ARRLYVGNIPRTV N+EL KIVQEHGAVEK EVMYDKYSGRSRR
Sbjct: 57  VAEQAATATE----ASARRLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRR 112

Query: 504 FAFVTMKTVEDANAVIEKLNGTEIGERQIKVNVTEKPLSISDFSLLQAEESQFVDSPYKV 683
           FAFVTMKTVEDA AVIEKLNGTEIG R++KVNVTEKPLS  D  LLQAEES+F+DSP+KV
Sbjct: 113 FAFVTMKTVEDATAVIEKLNGTEIGGREVKVNVTEKPLSTPDLPLLQAEESEFIDSPHKV 172

Query: 684 YVGNLAKEVTSDTLKDFFAEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVETAVSSFN 863
           YVGNLAK VT+DTLK+FF+EKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVE A+SSFN
Sbjct: 173 YVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSFN 232

Query: 864 NALLEGQKIRVNKA 905
           N+LLEGQ IRVNKA
Sbjct: 233 NSLLEGQTIRVNKA 246


>ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
           max]
          Length = 246

 Score =  316 bits (810), Expect = 6e-84
 Identities = 166/203 (81%), Positives = 178/203 (87%)
 Frame = +3

Query: 297 REPRRVSAAVAEETAVLTQDPSSEAARRLYVGNIPRTVNNDELQKIVQEHGAVEKVEVMY 476
           R  RR  AAVAE+ A  T+     AARRLYVGNIPRTV NDEL KIVQEHGAVEK EVMY
Sbjct: 48  RSGRRPFAAVAEQAATATE----AAARRLYVGNIPRTVTNDELAKIVQEHGAVEKAEVMY 103

Query: 477 DKYSGRSRRFAFVTMKTVEDANAVIEKLNGTEIGERQIKVNVTEKPLSISDFSLLQAEES 656
           DKYSGRSRRFAFVTMKTVEDA AVIEKLNGTE+G R+IKVNVTEKPLS  D  LLQAEES
Sbjct: 104 DKYSGRSRRFAFVTMKTVEDATAVIEKLNGTELGGREIKVNVTEKPLSTLDLPLLQAEES 163

Query: 657 QFVDSPYKVYVGNLAKEVTSDTLKDFFAEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEED 836
           +F+DSP+KVYVGNLAK VT+DTLK+FF+EKGKVLSAKVSRVPGTSKSSGYGFVTF SEED
Sbjct: 164 EFIDSPHKVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFPSEED 223

Query: 837 VETAVSSFNNALLEGQKIRVNKA 905
           VE A+SSFNN+LLEGQ IRVNKA
Sbjct: 224 VEAAISSFNNSLLEGQTIRVNKA 246


>gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score =  316 bits (810), Expect = 6e-84
 Identities = 176/262 (67%), Positives = 204/262 (77%), Gaps = 6/262 (2%)
 Frame = +3

Query: 138 MATFSSILSPNFLQNYPLTKSPMTQQSQLSKLSIQTFQ-SHPF----QISHKFSLSPLRE 302
           MAT SS+ +P      P T + +      SK S Q  + ++PF    + +H   +   + 
Sbjct: 1   MATISSLTTP-----LP-TSTKLALSRNQSKPSFQILKPANPFNHFPKFTHLHKILNTKA 54

Query: 303 PRRVSAAVAEETA-VLTQDPSSEAARRLYVGNIPRTVNNDELQKIVQEHGAVEKVEVMYD 479
           P+R+ A VAEETA     DPSSEAARRLYVGNIPRT+ N+EL KIV+EHGAVEK EVMYD
Sbjct: 55  PQRLFA-VAEETAPAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYD 113

Query: 480 KYSGRSRRFAFVTMKTVEDANAVIEKLNGTEIGERQIKVNVTEKPLSISDFSLLQAEESQ 659
           KYSGRSRRFAFVTMKT EDANA IEKLNGTEIG R+IKVN+TEKPL   D   LQ++E+Q
Sbjct: 114 KYSGRSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDETQ 173

Query: 660 FVDSPYKVYVGNLAKEVTSDTLKDFFAEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDV 839
           FVDSPYKVYVGNLAK V +DTLK+FF++KG VLSAKVSRVPGTSKSSG+GFVTFSSEEDV
Sbjct: 174 FVDSPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDV 233

Query: 840 ETAVSSFNNALLEGQKIRVNKA 905
           E A+SSFNN+LLEGQ IRVNKA
Sbjct: 234 EVAISSFNNSLLEGQPIRVNKA 255