BLASTX nr result

ID: Panax21_contig00006324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006324
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552808.1| PREDICTED: putative uncharacterized protein ...   273   8e-72
ref|XP_003598465.1| Pre-mRNA splicing factor ATP-dependent RNA h...   273   8e-72
ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA h...   273   1e-71
ref|XP_003537562.1| PREDICTED: putative uncharacterized protein ...   271   4e-71
ref|XP_003632479.1| PREDICTED: putative uncharacterized protein ...   263   1e-68

>ref|XP_003552808.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Glycine max]
          Length = 1729

 Score =  273 bits (699), Expect = 8e-72
 Identities = 122/172 (70%), Positives = 146/172 (84%), Gaps = 2/172 (1%)
 Frame = -1

Query: 512  IYEIAQTSSP--QKIGNEAACPICLCEVEDGYRIEGCGHEFCRLCLVEQCESAIKSQDSF 339
            ++EIA++S    ++ GN  +CPICLCEVEDGYR+EGCGH FCR+CLVEQ ESAIK+Q +F
Sbjct: 1501 VFEIARSSHHLVERFGNGPSCPICLCEVEDGYRLEGCGHLFCRMCLVEQFESAIKNQGTF 1560

Query: 338  PMRCTYKNCGACILISDFRFLLSNEKLEELFRASLGAFVAASGGIFRFCPSPDCPSVYRV 159
            P+ CT+++CG  IL++D R LL  +KLE+LFRASLGAFVA SGG +RFCPSPDCPS+YRV
Sbjct: 1561 PVCCTHRDCGDPILLTDLRSLLFGDKLEDLFRASLGAFVATSGGTYRFCPSPDCPSIYRV 1620

Query: 158  ADPGCAGTPFFCGACSVETCTKCHLEYHPYLSCERYREFKEDPDSSLKEWCK 3
            ADPG AG PF C AC  ETCT+CHLEYHPYLSCERY+EFKEDPDSSL EWC+
Sbjct: 1621 ADPGSAGEPFVCRACYSETCTRCHLEYHPYLSCERYKEFKEDPDSSLIEWCR 1672


>ref|XP_003598465.1| Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein
            [Medicago truncatula] gi|355487513|gb|AES68716.1|
            Pre-mRNA splicing factor ATP-dependent RNA helicase-like
            protein [Medicago truncatula]
          Length = 1774

 Score =  273 bits (699), Expect = 8e-72
 Identities = 119/171 (69%), Positives = 145/171 (84%), Gaps = 2/171 (1%)
 Frame = -1

Query: 509  YEIAQTSSP--QKIGNEAACPICLCEVEDGYRIEGCGHEFCRLCLVEQCESAIKSQDSFP 336
            +EIA+ S+P  ++     +CPICLCEVEDGY++EGCGH FC+ C+VEQCESAIK+Q SFP
Sbjct: 1503 FEIARLSNPSSERFDTGPSCPICLCEVEDGYQLEGCGHLFCQSCMVEQCESAIKNQGSFP 1562

Query: 335  MRCTYKNCGACILISDFRFLLSNEKLEELFRASLGAFVAASGGIFRFCPSPDCPSVYRVA 156
            +RC ++ CG  IL+ DFR LLSN+KLEELFRASLGAFVA+S G +RFCPSPDCPS+YRVA
Sbjct: 1563 IRCAHQGCGNHILLVDFRTLLSNDKLEELFRASLGAFVASSSGTYRFCPSPDCPSIYRVA 1622

Query: 155  DPGCAGTPFFCGACSVETCTKCHLEYHPYLSCERYREFKEDPDSSLKEWCK 3
            DP  A  PF CGAC  ETCT+CH+EYHPY+SCERYR+FK+DPDSSL++WCK
Sbjct: 1623 DPDTASAPFVCGACYSETCTRCHIEYHPYVSCERYRQFKDDPDSSLRDWCK 1673


>ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein
            [Medicago truncatula] gi|355490965|gb|AES72168.1|
            Pre-mRNA splicing factor ATP-dependent RNA helicase-like
            protein [Medicago truncatula]
          Length = 1718

 Score =  273 bits (697), Expect = 1e-71
 Identities = 124/170 (72%), Positives = 143/170 (84%), Gaps = 2/170 (1%)
 Frame = -1

Query: 506  EIAQTSSP--QKIGNEAACPICLCEVEDGYRIEGCGHEFCRLCLVEQCESAIKSQDSFPM 333
            EIA++S    +++    +CPICLCEVEDGY++EGCGH FCRLCLVEQCESAIK+Q SFP+
Sbjct: 1492 EIARSSHHLVERLDTGPSCPICLCEVEDGYKLEGCGHLFCRLCLVEQCESAIKNQGSFPI 1551

Query: 332  RCTYKNCGACILISDFRFLLSNEKLEELFRASLGAFVAASGGIFRFCPSPDCPSVYRVAD 153
             C ++ CG  IL++DFR LLSN+KL+ELFRASLGAFVA+S G +RFCPSPDCPSVYRVAD
Sbjct: 1552 CCAHQGCGDPILLTDFRTLLSNDKLDELFRASLGAFVASSSGTYRFCPSPDCPSVYRVAD 1611

Query: 152  PGCAGTPFFCGACSVETCTKCHLEYHPYLSCERYREFKEDPDSSLKEWCK 3
               A  PF CGAC  ETCTKCHLEYHPYLSCERYRE K+DPDSSLKEWCK
Sbjct: 1612 SDTASEPFVCGACYSETCTKCHLEYHPYLSCERYRELKDDPDSSLKEWCK 1661


>ref|XP_003537562.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Glycine max]
          Length = 1736

 Score =  271 bits (693), Expect = 4e-71
 Identities = 122/172 (70%), Positives = 145/172 (84%), Gaps = 2/172 (1%)
 Frame = -1

Query: 512  IYEIAQTSSP--QKIGNEAACPICLCEVEDGYRIEGCGHEFCRLCLVEQCESAIKSQDSF 339
            I+EIA++S    ++  N  +CPICLCEVEDGYR+EGCGH FCRLCLVEQ ESAI +Q +F
Sbjct: 1507 IFEIARSSHHLVERFENGPSCPICLCEVEDGYRLEGCGHLFCRLCLVEQFESAINNQGTF 1566

Query: 338  PMRCTYKNCGACILISDFRFLLSNEKLEELFRASLGAFVAASGGIFRFCPSPDCPSVYRV 159
            P+ CT+++CG  IL++D R LL  +KLE+LFRASLGAFVA SGG +RFCPSPDCPS+YRV
Sbjct: 1567 PVCCTHRDCGDPILLTDLRSLLFGDKLEDLFRASLGAFVATSGGAYRFCPSPDCPSIYRV 1626

Query: 158  ADPGCAGTPFFCGACSVETCTKCHLEYHPYLSCERYREFKEDPDSSLKEWCK 3
            ADP  AG PF CG+C  ETCT+CHLEYHPYLSCERY+EFKEDPDSSLKEWC+
Sbjct: 1627 ADPESAGEPFVCGSCYSETCTRCHLEYHPYLSCERYQEFKEDPDSSLKEWCR 1678


>ref|XP_003632479.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Vitis vinifera]
          Length = 1686

 Score =  263 bits (672), Expect = 1e-68
 Identities = 120/170 (70%), Positives = 140/170 (82%), Gaps = 2/170 (1%)
 Frame = -1

Query: 512  IYEIAQTS--SPQKIGNEAACPICLCEVEDGYRIEGCGHEFCRLCLVEQCESAIKSQDSF 339
            +YEIAQ S  S ++  +EAACPICLCEVEDGY +E C H+FCRLCLVEQCESAIKSQDSF
Sbjct: 1514 VYEIAQKSGSSDERPDDEAACPICLCEVEDGYCLEACAHKFCRLCLVEQCESAIKSQDSF 1573

Query: 338  PMRCTYKNCGACILISDFRFLLSNEKLEELFRASLGAFVAASGGIFRFCPSPDCPSVYRV 159
            P+ CT++ C   I ++D + LLS++KLEELFRASLGAFVA+SGG ++FCPSPDCPSVYRV
Sbjct: 1574 PVCCTHEGCRTPIWLTDLKSLLSSDKLEELFRASLGAFVASSGGAYKFCPSPDCPSVYRV 1633

Query: 158  ADPGCAGTPFFCGACSVETCTKCHLEYHPYLSCERYREFKEDPDSSLKEW 9
            A       PF CGAC VETCT+CH EYHPY+SCERY+ FKEDPD SLKEW
Sbjct: 1634 ASSSMTSEPFVCGACFVETCTRCHSEYHPYISCERYQGFKEDPDLSLKEW 1683


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