BLASTX nr result

ID: Panax21_contig00006316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006316
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331090.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82
ref|XP_002264400.1| PREDICTED: elongation factor 1-gamma-like [V...   304   3e-80
gb|ACU24330.1| unknown [Glycine max]                                  303   4e-80
emb|CBI29690.3| unnamed protein product [Vitis vinifera]              303   6e-80
ref|XP_002328789.1| predicted protein [Populus trichocarpa] gi|1...   303   6e-80

>ref|XP_002331090.1| predicted protein [Populus trichocarpa] gi|222872818|gb|EEF09949.1|
           predicted protein [Populus trichocarpa]
           gi|283136138|gb|ADB11388.1| gamma class glutathione
           transferase EF1Bgamma3 [Populus trichocarpa]
          Length = 421

 Score =  311 bits (797), Expect = 2e-82
 Identities = 156/230 (67%), Positives = 166/230 (72%)
 Frame = +2

Query: 2   TMVNQPNFSKILGVVNQTESVPPVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
           TMVNQPN  K++G V Q ESV PV                                    
Sbjct: 192 TMVNQPNVKKVVGEVKQAESVLPVTKPSQPKEPAKSKPKDEPRKEVKEKEPAKPKAEPAA 251

Query: 182 XXXXXXXXXXXXXXXXXXXSTMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFC 361
                              S MILD+WKRLYSNTKTNFREVAIKGFW+MYDPEGYSLWFC
Sbjct: 252 EEEEAPKPKPKNPLDLLPPSKMILDDWKRLYSNTKTNFREVAIKGFWEMYDPEGYSLWFC 311

Query: 362 NYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGFEPPYKVQGLWLFRGKEIPQ 541
           +YKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIG EPP+KV+GLWLFRG+EIPQ
Sbjct: 312 DYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQ 371

Query: 542 FVIDECYDMELYEWTKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK 691
           FVIDECYDMELYEWTKVDISDEAQKERV+QMIED EPFEG+ALLDAKCFK
Sbjct: 372 FVIDECYDMELYEWTKVDISDEAQKERVSQMIEDYEPFEGDALLDAKCFK 421


>ref|XP_002264400.1| PREDICTED: elongation factor 1-gamma-like [Vitis vinifera]
          Length = 423

 Score =  304 bits (778), Expect = 3e-80
 Identities = 142/151 (94%), Positives = 147/151 (97%)
 Frame = +2

Query: 239 STMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCNYKYNDENTVSFVTLNKVG 418
           S MILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFC+YKYNDENTVSFVTLNKVG
Sbjct: 273 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVG 332

Query: 419 GFLQRMDLARKYAFGKMLVIGFEPPYKVQGLWLFRGKEIPQFVIDECYDMELYEWTKVDI 598
           GFLQRMDLARKYAFGKMLVIG E P+KV+GLWLFRG+EIPQF+IDECYDMELYEW KVDI
Sbjct: 333 GFLQRMDLARKYAFGKMLVIGSEAPFKVKGLWLFRGQEIPQFIIDECYDMELYEWKKVDI 392

Query: 599 SDEAQKERVNQMIEDQEPFEGEALLDAKCFK 691
           SDEAQKERVNQMIEDQEPFEGEALLDAKCFK
Sbjct: 393 SDEAQKERVNQMIEDQEPFEGEALLDAKCFK 423


>gb|ACU24330.1| unknown [Glycine max]
          Length = 255

 Score =  303 bits (776), Expect = 4e-80
 Identities = 142/151 (94%), Positives = 147/151 (97%)
 Frame = +2

Query: 239 STMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCNYKYNDENTVSFVTLNKVG 418
           S MILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFC+YKYNDENTVSFVTLNKVG
Sbjct: 105 SPMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVG 164

Query: 419 GFLQRMDLARKYAFGKMLVIGFEPPYKVQGLWLFRGKEIPQFVIDECYDMELYEWTKVDI 598
           GFLQRMDLARKYAFGKMLVIG  PP+KV+GLWLFRG+EIP+FVIDECYDMELYEWTKVDI
Sbjct: 165 GFLQRMDLARKYAFGKMLVIGSVPPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVDI 224

Query: 599 SDEAQKERVNQMIEDQEPFEGEALLDAKCFK 691
           SDEAQKERVNQMIED EPFEGEALLDAKCFK
Sbjct: 225 SDEAQKERVNQMIEDYEPFEGEALLDAKCFK 255


>emb|CBI29690.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  303 bits (775), Expect = 6e-80
 Identities = 141/149 (94%), Positives = 146/149 (97%)
 Frame = +2

Query: 245 MILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCNYKYNDENTVSFVTLNKVGGF 424
           MILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFC+YKYNDENTVSFVTLNKVGGF
Sbjct: 1   MILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGF 60

Query: 425 LQRMDLARKYAFGKMLVIGFEPPYKVQGLWLFRGKEIPQFVIDECYDMELYEWTKVDISD 604
           LQRMDLARKYAFGKMLVIG E P+KV+GLWLFRG+EIPQF+IDECYDMELYEW KVDISD
Sbjct: 61  LQRMDLARKYAFGKMLVIGSEAPFKVKGLWLFRGQEIPQFIIDECYDMELYEWKKVDISD 120

Query: 605 EAQKERVNQMIEDQEPFEGEALLDAKCFK 691
           EAQKERVNQMIEDQEPFEGEALLDAKCFK
Sbjct: 121 EAQKERVNQMIEDQEPFEGEALLDAKCFK 149


>ref|XP_002328789.1| predicted protein [Populus trichocarpa] gi|118485610|gb|ABK94655.1|
           unknown [Populus trichocarpa]
           gi|222839087|gb|EEE77438.1| predicted protein [Populus
           trichocarpa] gi|283136136|gb|ADB11387.1| gamma class
           glutathione transferase EF1Bgamma2 [Populus trichocarpa]
          Length = 422

 Score =  303 bits (775), Expect = 6e-80
 Identities = 153/231 (66%), Positives = 164/231 (70%), Gaps = 1/231 (0%)
 Frame = +2

Query: 2   TMVNQPNFSKILGVVNQTESV-PPVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 178
           TM+NQPN  K++G V Q E V P  +                                  
Sbjct: 192 TMINQPNVKKVMGEVKQAEVVVPITKKPGPPKESAKSKAKEEPKKEAKEKEPAKPKAEPA 251

Query: 179 XXXXXXXXXXXXXXXXXXXXSTMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWF 358
                               S MILD+WKRLYSNTKTNFREVAIKGFW+MYDPEGYSLWF
Sbjct: 252 VEEEEAPKPKPKNPLDLLPPSKMILDDWKRLYSNTKTNFREVAIKGFWEMYDPEGYSLWF 311

Query: 359 CNYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGFEPPYKVQGLWLFRGKEIP 538
           CNYKYN+ENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIG EPP+KV+GLWLFRG+EIP
Sbjct: 312 CNYKYNEENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIP 371

Query: 539 QFVIDECYDMELYEWTKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK 691
           QFVIDECYDMELYEWTKVDISDEAQKER +QMIED EPFEGEALLDAKCFK
Sbjct: 372 QFVIDECYDMELYEWTKVDISDEAQKERASQMIEDCEPFEGEALLDAKCFK 422


Top