BLASTX nr result

ID: Panax21_contig00006300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006300
         (1771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63089.1| hypothetical protein VITISV_032016 [Vitis vinifera]   821   0.0  
ref|XP_002279590.2| PREDICTED: glycine dehydrogenase [decarboxyl...   817   0.0  
gb|ABO61734.1| mitochondrial glycine decarboxylase complex P-pro...   813   0.0  
ref|XP_002308562.1| precursor of carboxylase p-protein 1, glycin...   809   0.0  
sp|P49361.1|GCSPA_FLAPR RecName: Full=Glycine dehydrogenase [dec...   808   0.0  

>emb|CAN63089.1| hypothetical protein VITISV_032016 [Vitis vinifera]
          Length = 1036

 Score =  821 bits (2121), Expect = 0.0
 Identities = 413/488 (84%), Positives = 442/488 (90%), Gaps = 3/488 (0%)
 Frame = +3

Query: 315  MERARRLASQAILRRLVSEAKQHRPNELPSASSSCPVMYSPSRYVSSLSPYTFNGKNGRS 494
            MERARR+A++AILRRLVSE+KQ RP   P         +S  RYVSSL    F  K  RS
Sbjct: 1    MERARRIANRAILRRLVSESKQQRPCPRPQNEGLVNSSFSGWRYVSSLPTCAFPNKTVRS 60

Query: 495  K---GRNVSNNVGFGIGSQVRSISVEALKPSDTFPRRHNSATPEEQTKMVEFCGYPSLDS 665
                GRNV ++VGFG+G Q RSISVEALKPSDTFPRRHNSATPEEQTKM E CGY SLDS
Sbjct: 61   DVLLGRNVMSSVGFGMGCQTRSISVEALKPSDTFPRRHNSATPEEQTKMAESCGYESLDS 120

Query: 666  LVDATVPKSIRLDSMKFSKFDEGLTESQMIEHMKTLASKNKVFKSFIGMGYYNTFVPPVI 845
            LVDATVPKSIRL+S+KFSKFDEGLTESQMIEHM  LA+KNKVFKS+IGMGYYNTFVPPVI
Sbjct: 121  LVDATVPKSIRLESLKFSKFDEGLTESQMIEHMMQLAAKNKVFKSYIGMGYYNTFVPPVI 180

Query: 846  LRNIMENPGWYTQYTPYQAEISQGRLESLLNYQTLITDLTGLPMSNASLLDEGTAAAEAM 1025
            LRNIMENPGWYTQYTPYQAEI+QGRLESLLNYQTLI+DLTGLPMSNASLLDEGTAAAEAM
Sbjct: 181  LRNIMENPGWYTQYTPYQAEIAQGRLESLLNYQTLISDLTGLPMSNASLLDEGTAAAEAM 240

Query: 1026 AMCNHIQKGKKKTFIIASNCHPQTIDICKTRADGFDLKVVTADIKDFDYSSGDVCGVLIQ 1205
            AMCN+I KGKKKTFIIASNCHPQTIDICKTRA+GFDLKVVTAD+KD DY SGDVCGVL+Q
Sbjct: 241  AMCNNIMKGKKKTFIIASNCHPQTIDICKTRAEGFDLKVVTADLKDIDYKSGDVCGVLVQ 300

Query: 1206 YPGTEGEVLDYGEFVKNAHAKGVKVVVASDLLALTLLKPPGEFGADIVVGSAQRFGVPMG 1385
            YP TEGEVLDYGEF+KNAHA GVKVV+ASDLLALT+LKPPGEFGADIVVGSAQRFGVPMG
Sbjct: 301  YPDTEGEVLDYGEFIKNAHANGVKVVMASDLLALTMLKPPGEFGADIVVGSAQRFGVPMG 360

Query: 1386 YGGPHAAFLATSQDYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQ 1565
            YGGPHAAFLATSQ+YKRMMPGRIIGVSVD+SGKPALRMAMQTREQHIRRDKATSNICTAQ
Sbjct: 361  YGGPHAAFLATSQEYKRMMPGRIIGVSVDASGKPALRMAMQTREQHIRRDKATSNICTAQ 420

Query: 1566 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFAAGVQKLGTAEVQGLPFFDTVKIKCAD 1745
            ALLANMAAM+AVYHGPEGLKTIAQRVHGLAG FA G++KLGT EVQGLPFFDTVK+KCAD
Sbjct: 421  ALLANMAAMFAVYHGPEGLKTIAQRVHGLAGVFALGLKKLGTVEVQGLPFFDTVKVKCAD 480

Query: 1746 SKKIVEAA 1769
            +  I +AA
Sbjct: 481  AHAIADAA 488


>ref|XP_002279590.2| PREDICTED: glycine dehydrogenase [decarboxylating], mitochondrial
            [Vitis vinifera]
          Length = 1043

 Score =  817 bits (2110), Expect = 0.0
 Identities = 410/485 (84%), Positives = 439/485 (90%)
 Frame = +3

Query: 315  MERARRLASQAILRRLVSEAKQHRPNELPSASSSCPVMYSPSRYVSSLSPYTFNGKNGRS 494
            MERARR+A++AILRRLVSE+KQ RP   P         +S  RYVSSL  Y         
Sbjct: 1    MERARRIANRAILRRLVSESKQQRPCPRPQNEGLVNSSFSGWRYVSSLPTYVL------- 53

Query: 495  KGRNVSNNVGFGIGSQVRSISVEALKPSDTFPRRHNSATPEEQTKMVEFCGYPSLDSLVD 674
             GRNV ++VGFG+G Q RSISVEALKPSDTFPRRHNSATPEEQTKM E CGY SLDSLVD
Sbjct: 54   LGRNVMSSVGFGMGCQTRSISVEALKPSDTFPRRHNSATPEEQTKMAESCGYESLDSLVD 113

Query: 675  ATVPKSIRLDSMKFSKFDEGLTESQMIEHMKTLASKNKVFKSFIGMGYYNTFVPPVILRN 854
            ATVPKSIRL+S+KFSKFDEGLTESQMIEHM  LA+KNKVFKS+IGMGYYNTFVPPVILRN
Sbjct: 114  ATVPKSIRLESLKFSKFDEGLTESQMIEHMMQLAAKNKVFKSYIGMGYYNTFVPPVILRN 173

Query: 855  IMENPGWYTQYTPYQAEISQGRLESLLNYQTLITDLTGLPMSNASLLDEGTAAAEAMAMC 1034
            IMENPGWYTQYTPYQAEI+QGRLESLLNYQTLI+DLTGLPMSNASLLDEGTAAAEAMAMC
Sbjct: 174  IMENPGWYTQYTPYQAEIAQGRLESLLNYQTLISDLTGLPMSNASLLDEGTAAAEAMAMC 233

Query: 1035 NHIQKGKKKTFIIASNCHPQTIDICKTRADGFDLKVVTADIKDFDYSSGDVCGVLIQYPG 1214
            N+I KGKKKTFIIASNCHPQTIDICKTRA+GFDLKVVTAD+KD DY SGDVCGVL+QYP 
Sbjct: 234  NNIMKGKKKTFIIASNCHPQTIDICKTRAEGFDLKVVTADLKDIDYKSGDVCGVLVQYPD 293

Query: 1215 TEGEVLDYGEFVKNAHAKGVKVVVASDLLALTLLKPPGEFGADIVVGSAQRFGVPMGYGG 1394
            TEGEVLDYGEF+KNAHA GVKVV+ASDLLALT+LKPPGEFGADIVVGSAQRFGVPMGYGG
Sbjct: 294  TEGEVLDYGEFIKNAHANGVKVVMASDLLALTMLKPPGEFGADIVVGSAQRFGVPMGYGG 353

Query: 1395 PHAAFLATSQDYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALL 1574
            PHAAFLATSQ+YKRMMPGRIIGVSVD+SGKPALRMAMQTREQHIRRDKATSNICTAQALL
Sbjct: 354  PHAAFLATSQEYKRMMPGRIIGVSVDASGKPALRMAMQTREQHIRRDKATSNICTAQALL 413

Query: 1575 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFAAGVQKLGTAEVQGLPFFDTVKIKCADSKK 1754
            ANMAAM+AVYHGPEGLKTIAQRVHGLAG FA G++KLGT EVQGLPFFDTVK+KCAD+  
Sbjct: 414  ANMAAMFAVYHGPEGLKTIAQRVHGLAGVFALGLKKLGTVEVQGLPFFDTVKVKCADAHA 473

Query: 1755 IVEAA 1769
            I +AA
Sbjct: 474  IADAA 478


>gb|ABO61734.1| mitochondrial glycine decarboxylase complex P-protein [Populus
            tremuloides]
          Length = 1060

 Score =  813 bits (2101), Expect = 0.0
 Identities = 414/494 (83%), Positives = 448/494 (90%), Gaps = 9/494 (1%)
 Frame = +3

Query: 315  MERARRLASQAILRRLVSEAKQHRP---NELPSASSSCPVMYSPSRYVSSLSPY-TFNGK 482
            MERARRLA++AIL+RLV+E+KQ      N+    +SS PV Y+PSRYVSSLS + + + +
Sbjct: 1    MERARRLANRAILKRLVNESKQSHKQARNDSSLLNSSSPVSYTPSRYVSSLSSFGSRSPR 60

Query: 483  NGRSKGRN--VSNNVG---FGIGSQVRSISVEALKPSDTFPRRHNSATPEEQTKMVEFCG 647
            +G   G    VS NV    +GIGSQ+RSISVE+LKPSDTFPRRHNSATPEEQTKM E CG
Sbjct: 61   SGLLPGTKNIVSRNVPAGYYGIGSQIRSISVESLKPSDTFPRRHNSATPEEQTKMAELCG 120

Query: 648  YPSLDSLVDATVPKSIRLDSMKFSKFDEGLTESQMIEHMKTLASKNKVFKSFIGMGYYNT 827
            + +LDSL+DATVPKSIRLDSMKFSKFD GLTESQMIEHMK LASKNKVFKS+IGMGYYNT
Sbjct: 121  FDTLDSLIDATVPKSIRLDSMKFSKFDGGLTESQMIEHMKYLASKNKVFKSYIGMGYYNT 180

Query: 828  FVPPVILRNIMENPGWYTQYTPYQAEISQGRLESLLNYQTLITDLTGLPMSNASLLDEGT 1007
            +VPPVILRNIMENP WYTQYTPYQAEISQGRLESLLNYQT+ITDLTGLPMSNASLLDEGT
Sbjct: 181  YVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMSNASLLDEGT 240

Query: 1008 AAAEAMAMCNHIQKGKKKTFIIASNCHPQTIDICKTRADGFDLKVVTADIKDFDYSSGDV 1187
            AAAEAMAMCN+IQKGKKKTFIIA+NCHPQTIDIC TRA GFDLKVVTAD+KD DY SGDV
Sbjct: 241  AAAEAMAMCNNIQKGKKKTFIIANNCHPQTIDICDTRAGGFDLKVVTADLKDIDYKSGDV 300

Query: 1188 CGVLIQYPGTEGEVLDYGEFVKNAHAKGVKVVVASDLLALTLLKPPGEFGADIVVGSAQR 1367
            CGVL+QYPGTEGEVLDYGEFVKNAHA GVKVV+ASDLLALT+LKPPGE GADIVVGSAQR
Sbjct: 301  CGVLVQYPGTEGEVLDYGEFVKNAHAHGVKVVMASDLLALTMLKPPGELGADIVVGSAQR 360

Query: 1368 FGVPMGYGGPHAAFLATSQDYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATS 1547
            FGVPMGYGGPHAAFLATSQ+YKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATS
Sbjct: 361  FGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATS 420

Query: 1548 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFAAGVQKLGTAEVQGLPFFDTV 1727
            NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAG FA G++KLGT EVQGLPFFDTV
Sbjct: 421  NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGAFAVGLKKLGTVEVQGLPFFDTV 480

Query: 1728 KIKCADSKKIVEAA 1769
            K+KCAD+  I +AA
Sbjct: 481  KVKCADAHAIADAA 494


>ref|XP_002308562.1| precursor of carboxylase p-protein 1, glycine decarboxylase complex
            [Populus trichocarpa] gi|222854538|gb|EEE92085.1|
            precursor of carboxylase p-protein 1, glycine
            decarboxylase complex [Populus trichocarpa]
          Length = 1060

 Score =  809 bits (2090), Expect = 0.0
 Identities = 411/494 (83%), Positives = 446/494 (90%), Gaps = 9/494 (1%)
 Frame = +3

Query: 315  MERARRLASQAILRRLVSEAKQHRP---NELPSASSSCPVMYSPSRYVSSLSPY-TFNGK 482
            MERARRLA++AIL+RLV+E+KQ      N+    +SS PV Y+PSRYVSSLS + + + +
Sbjct: 1    MERARRLANRAILKRLVNESKQSHKQARNDSSLLNSSSPVSYTPSRYVSSLSSFGSRSPR 60

Query: 483  NGRSKGRN--VSNNV---GFGIGSQVRSISVEALKPSDTFPRRHNSATPEEQTKMVEFCG 647
            +G   G    VS+NV    +GIGSQ+RSISVE+LKPSDTFPRRHNSATPEEQTKM E CG
Sbjct: 61   SGLLPGTKNIVSHNVPAGSYGIGSQIRSISVESLKPSDTFPRRHNSATPEEQTKMAELCG 120

Query: 648  YPSLDSLVDATVPKSIRLDSMKFSKFDEGLTESQMIEHMKTLASKNKVFKSFIGMGYYNT 827
            + +LDSL+DATVPKSIRLDSMKFSKFD GLTESQMIEHM  LASKNKVFKS+IGMGYYNT
Sbjct: 121  FDTLDSLIDATVPKSIRLDSMKFSKFDGGLTESQMIEHMNYLASKNKVFKSYIGMGYYNT 180

Query: 828  FVPPVILRNIMENPGWYTQYTPYQAEISQGRLESLLNYQTLITDLTGLPMSNASLLDEGT 1007
             VPPVILRNIMENP WYTQYTPYQAEISQGRLESLLNYQT+ITDLTGLPMSNASLLDEGT
Sbjct: 181  HVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMSNASLLDEGT 240

Query: 1008 AAAEAMAMCNHIQKGKKKTFIIASNCHPQTIDICKTRADGFDLKVVTADIKDFDYSSGDV 1187
            AAAEAMAMCN+IQKGKKKTFIIA+NCHPQTIDIC TRA GFDLKVVTAD+KD DY SGDV
Sbjct: 241  AAAEAMAMCNNIQKGKKKTFIIANNCHPQTIDICDTRAGGFDLKVVTADLKDIDYKSGDV 300

Query: 1188 CGVLIQYPGTEGEVLDYGEFVKNAHAKGVKVVVASDLLALTLLKPPGEFGADIVVGSAQR 1367
            CGVL+QYPGTEGEVLDYGEF+KNAHA GVKVV+ASDLLALT+LKPPGE GADIVVGSAQR
Sbjct: 301  CGVLVQYPGTEGEVLDYGEFIKNAHAHGVKVVMASDLLALTMLKPPGELGADIVVGSAQR 360

Query: 1368 FGVPMGYGGPHAAFLATSQDYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATS 1547
            FGVPMGYGGPHAAFLATSQ+YKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATS
Sbjct: 361  FGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATS 420

Query: 1548 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFAAGVQKLGTAEVQGLPFFDTV 1727
            NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAG F  G++KLGT EVQGLPFFDTV
Sbjct: 421  NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGAFTVGLKKLGTVEVQGLPFFDTV 480

Query: 1728 KIKCADSKKIVEAA 1769
            K+KCAD+  I +AA
Sbjct: 481  KVKCADAHAIADAA 494


>sp|P49361.1|GCSPA_FLAPR RecName: Full=Glycine dehydrogenase [decarboxylating] A,
            mitochondrial; AltName: Full=Glycine cleavage system P
            protein A; AltName: Full=Glycine decarboxylase A; Flags:
            Precursor gi|608712|emb|CAA85353.1| P-protein of the
            glycine cleavage system [Flaveria pringlei]
          Length = 1037

 Score =  808 bits (2088), Expect = 0.0
 Identities = 409/485 (84%), Positives = 442/485 (91%)
 Frame = +3

Query: 315  MERARRLASQAILRRLVSEAKQHRPNELPSASSSCPVMYSPSRYVSSLSPYTFNGKNGRS 494
            MERARRLA++AIL RLVS+ K H P      S S P + SPSRYVSSLSPY  +G N RS
Sbjct: 1    MERARRLANKAILGRLVSQTK-HNP------SISSPALCSPSRYVSSLSPYVCSGTNVRS 53

Query: 495  KGRNVSNNVGFGIGSQVRSISVEALKPSDTFPRRHNSATPEEQTKMVEFCGYPSLDSLVD 674
              RN++     G GSQVR+ISVEALKPSDTFPRRHNSATPEEQTKM EF G+P+LDSL+D
Sbjct: 54   D-RNLN-----GFGSQVRTISVEALKPSDTFPRRHNSATPEEQTKMAEFVGFPNLDSLID 107

Query: 675  ATVPKSIRLDSMKFSKFDEGLTESQMIEHMKTLASKNKVFKSFIGMGYYNTFVPPVILRN 854
            ATVPKSIRLDSMK+SKFDEGLTESQMI HM+ LASKNK+FKSFIGMGYYNT VP VILRN
Sbjct: 108  ATVPKSIRLDSMKYSKFDEGLTESQMIAHMQDLASKNKIFKSFIGMGYYNTSVPTVILRN 167

Query: 855  IMENPGWYTQYTPYQAEISQGRLESLLNYQTLITDLTGLPMSNASLLDEGTAAAEAMAMC 1034
            IMENPGWYTQYTPYQAEI+QGRLESLLN+QT++TDLTGLPMSNASLLDEGTAAAEAMAMC
Sbjct: 168  IMENPGWYTQYTPYQAEIAQGRLESLLNFQTMVTDLTGLPMSNASLLDEGTAAAEAMAMC 227

Query: 1035 NHIQKGKKKTFIIASNCHPQTIDICKTRADGFDLKVVTADIKDFDYSSGDVCGVLIQYPG 1214
            N+IQKGKKKTFIIASNCHPQTIDICKTRADGFDLKVVT+D+KDFDYSSGDVCGVL+QYPG
Sbjct: 228  NNIQKGKKKTFIIASNCHPQTIDICKTRADGFDLKVVTSDLKDFDYSSGDVCGVLVQYPG 287

Query: 1215 TEGEVLDYGEFVKNAHAKGVKVVVASDLLALTLLKPPGEFGADIVVGSAQRFGVPMGYGG 1394
            TEGE+LDY EF+KNAHA GVKVV+ASDLLALT+LKPPGE GADIVVGSAQRFGVPMGYGG
Sbjct: 288  TEGELLDYSEFIKNAHANGVKVVMASDLLALTILKPPGELGADIVVGSAQRFGVPMGYGG 347

Query: 1395 PHAAFLATSQDYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALL 1574
            PHAAFLATSQ+YKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALL
Sbjct: 348  PHAAFLATSQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALL 407

Query: 1575 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFAAGVQKLGTAEVQGLPFFDTVKIKCADSKK 1754
            ANMAAM+ VYHGPEGLKTIA+RVHGLAGTFAAG++KLGT +VQ LPFFDTVK+ C DSK 
Sbjct: 408  ANMAAMFGVYHGPEGLKTIAKRVHGLAGTFAAGLKKLGTVQVQDLPFFDTVKVTCVDSKA 467

Query: 1755 IVEAA 1769
            I E A
Sbjct: 468  IAEEA 472


Top