BLASTX nr result

ID: Panax21_contig00006295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006295
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250...    95   5e-26
ref|XP_003540498.1| PREDICTED: uncharacterized protein LOC100812...    59   3e-16
ref|XP_002524524.1| conserved hypothetical protein [Ricinus comm...    76   2e-15
ref|XP_003541816.1| PREDICTED: uncharacterized protein LOC100793...    59   2e-15
ref|XP_003596313.1| DNA polymerase delta subunit [Medicago trunc...    54   4e-14

>ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250468 [Vitis vinifera]
          Length = 524

 Score = 94.7 bits (234), Expect(2) = 5e-26
 Identities = 57/114 (50%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
 Frame = +3

Query: 30  VQAEELFKQPTTVNNYLRDNRLFGVSNSYVK-CNSGTPVSSVALLDKGSKVPGPSRNYFA 206
           VQAEELFKQP  V+N LRDNR  G+SNS+VK    G PVS+VA   K + + GPS++  A
Sbjct: 117 VQAEELFKQPFAVDNCLRDNRFCGISNSFVKRIAEGAPVSNVASQPKTTGLLGPSKSISA 176

Query: 207 HQSASVPLP*QKKHQQLSTGFDSQSCNEVRDVKNGSHGIRAHEQGSKLAAKR*K 368
            Q+ +V  P ++K QQ S     QS + V DVK+ S+G RAH+Q SK  A + K
Sbjct: 177 PQTIAVQQPQERKVQQSSPKVSLQSPSVVTDVKDESNGTRAHDQASKPPADKGK 230



 Score = 50.4 bits (119), Expect(2) = 5e-26
 Identities = 29/45 (64%), Positives = 32/45 (71%)
 Frame = +2

Query: 359 KVKAHQFPADKKKGGQNDKMNFATGGSLASMWGRASAKLKPGGAP 493
           K KA   PA+KKKG QNDK +  T GSLA+MWGRAS K KP  AP
Sbjct: 228 KGKAPPLPANKKKG-QNDKSS-GTEGSLANMWGRASVKSKPSCAP 270


>ref|XP_003540498.1| PREDICTED: uncharacterized protein LOC100812372 [Glycine max]
          Length = 518

 Score = 58.5 bits (140), Expect(2) = 3e-16
 Identities = 36/98 (36%), Positives = 55/98 (56%)
 Frame = +3

Query: 30  VQAEELFKQPTTVNNYLRDNRLFGVSNSYVKCNSGTPVSSVALLDKGSKVPGPSRNYFAH 209
           +QAEELFKQP++V+N LRDNR  G+SNS+V+ N   P    A     S   GP+++    
Sbjct: 117 IQAEELFKQPSSVDNCLRDNRFCGISNSFVQRNVDGPTVVFAAPQSKSVGEGPTKSDIVQ 176

Query: 210 QSASVPLP*QKKHQQLSTGFDSQSCNEVRDVKNGSHGI 323
           Q      P +   +      D++  + V++VK+ S+GI
Sbjct: 177 Q------PPKNISRDSIDKVDTKPQSVVKEVKSESNGI 208



 Score = 53.5 bits (127), Expect(2) = 3e-16
 Identities = 30/54 (55%), Positives = 33/54 (61%)
 Frame = +2

Query: 359 KVKAHQFPADKKKGGQNDKMNFATGGSLASMWGRASAKLKPGGAPSETNNTIPN 520
           K KA   P  KKK  Q DK     GGSLAS+WGRASAK KP  + +E NN I N
Sbjct: 224 KEKAPPLPTGKKKV-QADKSGSVNGGSLASLWGRASAKPKPCSSSAENNNKISN 276


>ref|XP_002524524.1| conserved hypothetical protein [Ricinus communis]
           gi|223536198|gb|EEF37851.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 573

 Score = 75.9 bits (185), Expect(2) = 2e-15
 Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
 Frame = +3

Query: 30  VQAEELFKQPTTVNNYLRDNRLFGVSNSYVKCN-SGTPVSSVALLDKGSKVPGPSRNYFA 206
           VQAEELF+QP   +N LRDNR  G+ N +VK N +G PVS+     K   +P PS++  A
Sbjct: 114 VQAEELFRQPNVADNCLRDNRFCGILNPFVKRNVAGNPVSNAVSQPKSVGIPEPSKSNSA 173

Query: 207 HQSASVPLP*QKKHQQLSTGFDSQSCNEVRDVKNGSHGIRAHEQGSK 347
           H++  VPL  Q K +Q       QS   V+D+K+ SH     +Q SK
Sbjct: 174 HENIKVPLQ-QIKDEQSGPMVGKQSTILVKDIKSESH--ETEDQSSK 217



 Score = 33.5 bits (75), Expect(2) = 2e-15
 Identities = 20/42 (47%), Positives = 25/42 (59%)
 Frame = +2

Query: 380 PADKKKGGQNDKMNFATGGSLASMWGRASAKLKPGGAPSETN 505
           P ++KKG Q DK    +  SLA++WGRASAK K   A    N
Sbjct: 227 PTNEKKG-QGDK----SSSSLANLWGRASAKSKLTSAEDNKN 263


>ref|XP_003541816.1| PREDICTED: uncharacterized protein LOC100793247 [Glycine max]
          Length = 497

 Score = 58.5 bits (140), Expect(2) = 2e-15
 Identities = 37/98 (37%), Positives = 54/98 (55%)
 Frame = +3

Query: 30  VQAEELFKQPTTVNNYLRDNRLFGVSNSYVKCNSGTPVSSVALLDKGSKVPGPSRNYFAH 209
           +QAEELFKQP++V+N LRDNR  GV NS+V+ N   P    A     S   GP+++   H
Sbjct: 117 IQAEELFKQPSSVDNCLRDNRFSGVFNSFVRWNVDGPTVVSAAPQSKSLGEGPTKSNIVH 176

Query: 210 QSASVPLP*QKKHQQLSTGFDSQSCNEVRDVKNGSHGI 323
           Q      P +          D++  + V++VK+ S+GI
Sbjct: 177 Q------PSKNIACDSIDKVDTKPQSVVKEVKSESNGI 208



 Score = 50.8 bits (120), Expect(2) = 2e-15
 Identities = 28/54 (51%), Positives = 33/54 (61%)
 Frame = +2

Query: 359 KVKAHQFPADKKKGGQNDKMNFATGGSLASMWGRASAKLKPGGAPSETNNTIPN 520
           K KA   P  +KK  Q DK     GGSLAS+WGRASAK +P  + +E NN I N
Sbjct: 224 KEKAPPLPTGQKKV-QADKSGSVNGGSLASLWGRASAKPRPCSSSAENNNKISN 276


>ref|XP_003596313.1| DNA polymerase delta subunit [Medicago truncatula]
           gi|355485361|gb|AES66564.1| DNA polymerase delta subunit
           [Medicago truncatula]
          Length = 527

 Score = 53.9 bits (128), Expect(2) = 4e-14
 Identities = 30/57 (52%), Positives = 33/57 (57%)
 Frame = +2

Query: 356 KKVKAHQFPADKKKGGQNDKMNFATGGSLASMWGRASAKLKPGGAPSETNNTIPNAA 526
           +K K+   PA KKKG Q DK     GGSLAS WGR SAK KP   P E +N I   A
Sbjct: 227 EKEKSLPLPAGKKKG-QADKSGSVNGGSLASFWGRPSAKPKPCAVPEENSNMISKPA 282



 Score = 51.2 bits (121), Expect(2) = 4e-14
 Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
 Frame = +3

Query: 30  VQAEELFKQPTTVNNYLRDNRLFGVSNSY---VKCN-SGTPVSSVALLDKGSKVPGPSRN 197
           +QAEELFKQ + V+N L DNR  G+SNS+   VK N  G P  S     K     GP+++
Sbjct: 117 IQAEELFKQLSKVDNCLGDNRFCGISNSFVQRVKRNVDGQPAVSATPEVKSVVGLGPTKS 176

Query: 198 YFAHQSASVPLP*QKKHQQLSTGFDSQSCNEVRDVKNGSHG 320
              HQ      P    H  ++   D ++ N V+DVK+ S+G
Sbjct: 177 NVVHQP-----PKNIAHNSIAK-VDLKTQNVVKDVKSESNG 211


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