BLASTX nr result

ID: Panax21_contig00006290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006290
         (1084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF74982.1|AF082892_1 cystathionine gamma-synthase isoform 2 ...   477   e-132
ref|NP_001234489.1| cystathionine gamma synthase [Solanum lycope...   471   e-130
gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase isoform 1 ...   468   e-130
ref|XP_002283866.1| PREDICTED: cystathionine gamma-synthase, chl...   448   e-124
emb|CBI22246.3| unnamed protein product [Vitis vinifera]              441   e-121

>gb|AAF74982.1|AF082892_1 cystathionine gamma-synthase isoform 2 [Solanum tuberosum]
          Length = 540

 Score =  477 bits (1227), Expect = e-132
 Identities = 249/349 (71%), Positives = 280/349 (80%), Gaps = 6/349 (1%)
 Frame = +2

Query: 56   MAVSSYDRAFPSFECRSNPDFSG-IPRPEIPRSGARFTGKLNSAASHASF-GLSSMILRF 229
            MAV S  RAFPSF+CRS+PDFSG +PR ++P +G RF+ K+ S +  +S  G+SS+ILRF
Sbjct: 1    MAVPSSARAFPSFQCRSDPDFSGGVPRHDLPNAGVRFSVKVKSLSRGSSVHGMSSLILRF 60

Query: 230  PPNFVRQLSNKARRNCSNIGVAQVVAASWSNNQPXXXXXXXXXXXXXXXXXXXXXXXXXX 409
            PPNFVRQLS KARRNCSNIG+AQVVAASWSNN                            
Sbjct: 61   PPNFVRQLSVKARRNCSNIGLAQVVAASWSNNHASPDFTPAAKAVDAASIAPFDITTGDE 120

Query: 410  XXXXXXXXXXX----QLEVLTDVKYPSFLSSDGSLAIHAGERLGRSIFTDAITTPVVNTT 577
                           Q+E LTDVKY SFLSSDGS+AIHAGERLGR I TDAITTPVVNT+
Sbjct: 121  EGAVVEDSPRADRNVQIEDLTDVKYSSFLSSDGSIAIHAGERLGRGIVTDAITTPVVNTS 180

Query: 578  AYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVAEEKISALEGAESTLLMASGMCASTVL 757
            AYFF KTS+LIDFKEK+RASFEYGRYGNPT++VAEEKISALEGA++TLLMASGMCASTVL
Sbjct: 181  AYFFKKTSDLIDFKEKKRASFEYGRYGNPTSIVAEEKISALEGADATLLMASGMCASTVL 240

Query: 758  LMALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIKATVIDPADMEALESALDENNISLFF 937
            L+ALVPAGGHIVTTTDCYRKTRIFIET+LPKMGI ATVIDPAD+ ALES L++  ++LFF
Sbjct: 241  LLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADIGALESVLNQKKVTLFF 300

Query: 938  TESPTNPFLRCVDIELVSRLCHNKGALVCIDGTFATPLNQKVLALGADI 1084
            TESPTNPFLRCVDIELVS+LCH KGALVCIDGTFATPLNQKVLALGAD+
Sbjct: 301  TESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKVLALGADL 349


>ref|NP_001234489.1| cystathionine gamma synthase [Solanum lycopersicum]
            gi|40806079|gb|AAR92031.1| cystathionine gamma synthase
            [Solanum lycopersicum]
          Length = 540

 Score =  471 bits (1213), Expect = e-130
 Identities = 249/352 (70%), Positives = 275/352 (78%), Gaps = 9/352 (2%)
 Frame = +2

Query: 56   MAVSSYDRAFPSFECRSNPDFSG-IPRPEIPRSGARFTGKLNSAASHAS-FGLSSMILRF 229
            MAVSSY RAFPSFECRS PDFSG +P P   ++G RF+GK NS ++ +  +GLSS+I RF
Sbjct: 1    MAVSSYARAFPSFECRSEPDFSGSLPHP---KAGVRFSGKYNSGSNRSQVYGLSSLIYRF 57

Query: 230  PPNFVRQLSNKARRNCSNIGVAQVVAASWSNNQPXXXXXXXXXXXXXXXXXXXXXXXXXX 409
            PPNFVRQLS KARRNCSNIGVAQVVAASWSNNQ                           
Sbjct: 58   PPNFVRQLSIKARRNCSNIGVAQVVAASWSNNQAGPEFTPAANAVDSSASAAVTSIGITT 117

Query: 410  XXXXXXXXXXX-------QLEVLTDVKYPSFLSSDGSLAIHAGERLGRSIFTDAITTPVV 568
                              Q++  T VKY SFL+SDGS+AIHAGERLGR I TDAITTPVV
Sbjct: 118  GDEEVAVVENADCSDQNVQIKGSTGVKYASFLNSDGSVAIHAGERLGRGIVTDAITTPVV 177

Query: 569  NTTAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVAEEKISALEGAESTLLMASGMCAS 748
            NT+AYFFNKTS+LIDFKEKRRASFEYGRYGNPTTVV EEKISALEGAESTL++ASGMCAS
Sbjct: 178  NTSAYFFNKTSDLIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLIVASGMCAS 237

Query: 749  TVLLMALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIKATVIDPADMEALESALDENNIS 928
            TV+ +ALVPAGGHIVTTTDCYRKTR+FIET+LPKMGI ATVIDPADM ALE AL++  + 
Sbjct: 238  TVMFLALVPAGGHIVTTTDCYRKTRVFIETILPKMGITATVIDPADMGALELALNQKKVD 297

Query: 929  LFFTESPTNPFLRCVDIELVSRLCHNKGALVCIDGTFATPLNQKVLALGADI 1084
            LFFTESPTNPFLRCVDIELVS+LC  KGALVCIDGTFATPLNQK LALGAD+
Sbjct: 298  LFFTESPTNPFLRCVDIELVSKLCREKGALVCIDGTFATPLNQKALALGADL 349


>gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase isoform 1 [Solanum tuberosum]
          Length = 539

 Score =  468 bits (1205), Expect = e-130
 Identities = 248/351 (70%), Positives = 272/351 (77%), Gaps = 8/351 (2%)
 Frame = +2

Query: 56   MAVSSYDRAFPSFECRSNPDFSG-IPRPEIPRSGARFTGKLNSAASHAS-FGLSSMILRF 229
            MAVSSY RAFPSFECRS PDFSG +P P   ++G RF+GK NS ++ +  +GLSS+I RF
Sbjct: 1    MAVSSYARAFPSFECRSEPDFSGSLPHP---KAGVRFSGKYNSGSNRSQVYGLSSLIFRF 57

Query: 230  PPNFVRQLSNKARRNCSNIGVAQVVAASWSNNQ------PXXXXXXXXXXXXXXXXXXXX 391
            PPNFVRQLS KARRNCSNIGVAQVVAASWSNNQ      P                    
Sbjct: 58   PPNFVRQLSIKARRNCSNIGVAQVVAASWSNNQAGPEFTPAANAVDSSASAAVTSIGITA 117

Query: 392  XXXXXXXXXXXXXXXXXQLEVLTDVKYPSFLSSDGSLAIHAGERLGRSIFTDAITTPVVN 571
                                  T VKY SFL+SDGS+AIHAGERLGR I TDAITTPVVN
Sbjct: 118  GDEEVAVVENADCNDQNVQITGTGVKYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVN 177

Query: 572  TTAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVAEEKISALEGAESTLLMASGMCAST 751
            T+AYFFNKTS+LIDFKEKRRASFEYGRYGNPTTVV EEKISALEGAESTL++ASGMCAST
Sbjct: 178  TSAYFFNKTSDLIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLIVASGMCAST 237

Query: 752  VLLMALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIKATVIDPADMEALESALDENNISL 931
            V+ +ALVPAGGHIVTTTDCYRKTR+FIET+LPKMGI ATVIDPADM ALE  L++  + L
Sbjct: 238  VMFLALVPAGGHIVTTTDCYRKTRVFIETILPKMGITATVIDPADMGALELTLNQKKVDL 297

Query: 932  FFTESPTNPFLRCVDIELVSRLCHNKGALVCIDGTFATPLNQKVLALGADI 1084
            FFTESPTNPFLRCVDIELVS+LC  KGALVCIDGTFATPLNQK LALGAD+
Sbjct: 298  FFTESPTNPFLRCVDIELVSKLCREKGALVCIDGTFATPLNQKALALGADL 348


>ref|XP_002283866.1| PREDICTED: cystathionine gamma-synthase, chloroplastic-like [Vitis
            vinifera]
          Length = 531

 Score =  448 bits (1153), Expect = e-124
 Identities = 240/347 (69%), Positives = 263/347 (75%), Gaps = 4/347 (1%)
 Frame = +2

Query: 56   MAVSSYDRAFPSFECRSNPDFSGIP-RPEIPRSGARFTGKLNSAASHASFG---LSSMIL 223
            MAVSS  R   +FECRS PDF G P RPE   SG RF+GK +S  SH  FG   LSS+I 
Sbjct: 1    MAVSSCPRVSAAFECRSEPDFCGGPHRPEAFASGGRFSGKASSVPSHQIFGASALSSLIF 60

Query: 224  RFPPNFVRQLSNKARRNCSNIGVAQVVAASWSNNQPXXXXXXXXXXXXXXXXXXXXXXXX 403
            RFPPNFVRQLS KARRNCSNIGVAQVVAASWS +                          
Sbjct: 61   RFPPNFVRQLSTKARRNCSNIGVAQVVAASWSADSAAAAAASASAAAAASVEASVEVSVV 120

Query: 404  XXXXXXXXXXXXXQLEVLTDVKYPSFLSSDGSLAIHAGERLGRSIFTDAITTPVVNTTAY 583
                         Q E L D K  SFL  DG+L IHAGERLGR I TDAITTPVVNT+AY
Sbjct: 121  ESSGSDV------QYEDLADEK-ASFLGFDGTLTIHAGERLGRGIVTDAITTPVVNTSAY 173

Query: 584  FFNKTSELIDFKEKRRASFEYGRYGNPTTVVAEEKISALEGAESTLLMASGMCASTVLLM 763
            FF KT+ELIDFKEKRRASFEYGRYGNPTTVV EEKISALEGAEST++MASGMCASTV+L+
Sbjct: 174  FFKKTAELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTVIMASGMCASTVMLL 233

Query: 764  ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIKATVIDPADMEALESALDENNISLFFTE 943
            ALVP GGH+VTTTDCYR+TRIFIET LPK+G++ TVIDPAD EAL+SALD+NN++LFFTE
Sbjct: 234  ALVPPGGHMVTTTDCYRRTRIFIETFLPKLGVEVTVIDPADTEALKSALDKNNVTLFFTE 293

Query: 944  SPTNPFLRCVDIELVSRLCHNKGALVCIDGTFATPLNQKVLALGADI 1084
            SPTNPFLRCVDIELVS LCH KGALVCID TFATPLNQK L+LGAD+
Sbjct: 294  SPTNPFLRCVDIELVSELCHRKGALVCIDSTFATPLNQKTLSLGADL 340


>emb|CBI22246.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  441 bits (1134), Expect = e-121
 Identities = 238/347 (68%), Positives = 260/347 (74%), Gaps = 4/347 (1%)
 Frame = +2

Query: 56   MAVSSYDRAFPSFECRSNPDFSGIP-RPEIPRSGARFTGKLNSAASHASFG---LSSMIL 223
            MAVSS  R   +FECRS PDF G P RPE   SG RF+GK +S  SH  FG   LSS+I 
Sbjct: 1    MAVSSCPRVSAAFECRSEPDFCGGPHRPEAFASGGRFSGKASSVPSHQIFGASALSSLIF 60

Query: 224  RFPPNFVRQLSNKARRNCSNIGVAQVVAASWSNNQPXXXXXXXXXXXXXXXXXXXXXXXX 403
            RFPPNFVRQLS KARRNCSNIGVAQVVAAS                              
Sbjct: 61   RFPPNFVRQLSTKARRNCSNIGVAQVVAASCD---------------------------- 92

Query: 404  XXXXXXXXXXXXXQLEVLTDVKYPSFLSSDGSLAIHAGERLGRSIFTDAITTPVVNTTAY 583
                         Q E L D K  SFL  DG+L IHAGERLGR I TDAITTPVVNT+AY
Sbjct: 93   ------------VQYEDLADEK-ASFLGFDGTLTIHAGERLGRGIVTDAITTPVVNTSAY 139

Query: 584  FFNKTSELIDFKEKRRASFEYGRYGNPTTVVAEEKISALEGAESTLLMASGMCASTVLLM 763
            FF KT+ELIDFKEKRRASFEYGRYGNPTTVV EEKISALEGAEST++MASGMCASTV+L+
Sbjct: 140  FFKKTAELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTVIMASGMCASTVMLL 199

Query: 764  ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIKATVIDPADMEALESALDENNISLFFTE 943
            ALVP GGH+VTTTDCYR+TRIFIET LPK+G++ TVIDPAD EAL+SALD+NN++LFFTE
Sbjct: 200  ALVPPGGHMVTTTDCYRRTRIFIETFLPKLGVEVTVIDPADTEALKSALDKNNVTLFFTE 259

Query: 944  SPTNPFLRCVDIELVSRLCHNKGALVCIDGTFATPLNQKVLALGADI 1084
            SPTNPFLRCVDIELVS LCH KGALVCID TFATPLNQK L+LGAD+
Sbjct: 260  SPTNPFLRCVDIELVSELCHRKGALVCIDSTFATPLNQKTLSLGADL 306


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