BLASTX nr result

ID: Panax21_contig00006281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006281
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_03502914.1| probable GDP-L-fucose synthase protein [Rhizo...   167   1e-65
ref|XP_002324515.1| predicted protein [Populus trichocarpa] gi|2...   239   1e-60
ref|XP_003552287.1| PREDICTED: putative GDP-L-fucose synthase 2-...   238   2e-60
ref|NP_001242319.1| uncharacterized protein LOC100776301 [Glycin...   238   2e-60
ref|XP_003625896.1| GDP-L-fucose synthase [Medicago truncatula] ...   238   3e-60

>ref|ZP_03502914.1| probable GDP-L-fucose synthase protein [Rhizobium etli Kim 5]
          Length = 297

 Score =  167 bits (423), Expect(2) = 1e-65
 Identities = 79/125 (63%), Positives = 94/125 (75%)
 Frame = +2

Query: 725  MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVRGDKEVVVWGTGNPLREFLHVDDLADSV 904
            MPTNLYGP DNF  ++SHVLPAL+R+ H AKV    E+ +WGTG P REFLHVDD AD++
Sbjct: 144  MPTNLYGPGDNFDLQSSHVLPALIRKAHVAKVTRAPEITIWGTGTPRREFLHVDDCADAL 203

Query: 905  VFLLDKYSGLDHVNVGSGKEVTIKELAELVREVVGFEGDLVWDSSKPDGTPRKLMDSSKL 1084
            VFLL  YS   HVNVGSG+++ I ELA LV  VVG+EG +  D SKPDGTPRKLM + KL
Sbjct: 204  VFLLRNYSDAQHVNVGSGEDIEIVELARLVCRVVGYEGTIAHDLSKPDGTPRKLMSTDKL 263

Query: 1085 AGLGW 1099
              +GW
Sbjct: 264  KSMGW 268



 Score =  110 bits (275), Expect(2) = 1e-65
 Identities = 56/104 (53%), Positives = 76/104 (73%)
 Frame = +1

Query: 301 QIFVAGHRGLVGSAIVRKLQHLGFTNILVRAHSELDLTRQSDVESFFVASKPQYVILAAA 480
           +I+VAGHRG+VGSA+VR+L H     ++     ELDL RQ +VE F   ++P  +ILAAA
Sbjct: 8   KIWVAGHRGMVGSALVRRL-HSENCTVVTATRQELDLKRQDEVERFVQTNRPDAIILAAA 66

Query: 481 KVGGIHANNTYPADFISINLQIQTNVIDSAYRHGVKKLIFLGSS 612
           KVGGI AN T+PADF+  NL I+ N+ ++A+R GV +L+FLGSS
Sbjct: 67  KVGGILANGTFPADFLYDNLIIEANIFEAAHRSGVDRLLFLGSS 110


>ref|XP_002324515.1| predicted protein [Populus trichocarpa] gi|222865949|gb|EEF03080.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  239 bits (609), Expect = 1e-60
 Identities = 112/125 (89%), Positives = 120/125 (96%)
 Frame = +2

Query: 725  MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVRGDKEVVVWGTGNPLREFLHVDDLADSV 904
            MPTNLYGPNDNFHPENSHVLPALMRRFHEAKV   KEVVVWGTG+PLREFLHVDDLAD+V
Sbjct: 175  MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNKAKEVVVWGTGSPLREFLHVDDLADAV 234

Query: 905  VFLLDKYSGLDHVNVGSGKEVTIKELAELVREVVGFEGDLVWDSSKPDGTPRKLMDSSKL 1084
            VFL+DKYSGL+H+NVGSGKEVTIKELAELV+E VGFEG+LVWD+SKPDGTPRKLMDSSKL
Sbjct: 235  VFLMDKYSGLEHLNVGSGKEVTIKELAELVKEAVGFEGELVWDTSKPDGTPRKLMDSSKL 294

Query: 1085 AGLGW 1099
             GLGW
Sbjct: 295  LGLGW 299



 Score =  196 bits (497), Expect = 1e-47
 Identities = 99/122 (81%), Positives = 110/122 (90%), Gaps = 2/122 (1%)
 Frame = +1

Query: 256 MGGANTDS--ITLDKSAQIFVAGHRGLVGSAIVRKLQHLGFTNILVRAHSELDLTRQSDV 429
           MGG + DS     DKSA+IFVAGHRGLVGSAIVRKLQ  G TN+++R+HSELDLTRQSDV
Sbjct: 1   MGGPSHDSSDFLTDKSAKIFVAGHRGLVGSAIVRKLQSHGLTNLVLRSHSELDLTRQSDV 60

Query: 430 ESFFVASKPQYVILAAAKVGGIHANNTYPADFISINLQIQTNVIDSAYRHGVKKLIFLGS 609
           +SFF A KPQYVILAAAKVGGIHANNTYPADFI+INLQIQTNVIDS++RHGVKKL+FLGS
Sbjct: 61  DSFFAAEKPQYVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSSFRHGVKKLLFLGS 120

Query: 610 SC 615
           SC
Sbjct: 121 SC 122


>ref|XP_003552287.1| PREDICTED: putative GDP-L-fucose synthase 2-like [Glycine max]
          Length = 326

 Score =  238 bits (607), Expect = 2e-60
 Identities = 111/125 (88%), Positives = 121/125 (96%)
 Frame = +2

Query: 725  MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVRGDKEVVVWGTGNPLREFLHVDDLADSV 904
            MPTNLYGP DNFHPENSHVLPALMRRFHEAKV G KEVVVWGTG+PLREFLHVDDLAD+V
Sbjct: 179  MPTNLYGPYDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAV 238

Query: 905  VFLLDKYSGLDHVNVGSGKEVTIKELAELVREVVGFEGDLVWDSSKPDGTPRKLMDSSKL 1084
            VF+++KYSGL+H+NVGSGKEVTIKELAEL++EVVGFEGDLVWDS+KPDGTPRKLMDSSKL
Sbjct: 239  VFMMEKYSGLEHLNVGSGKEVTIKELAELMKEVVGFEGDLVWDSTKPDGTPRKLMDSSKL 298

Query: 1085 AGLGW 1099
            A LGW
Sbjct: 299  ASLGW 303



 Score =  181 bits (460), Expect = 2e-43
 Identities = 88/116 (75%), Positives = 105/116 (90%)
 Frame = +1

Query: 268 NTDSITLDKSAQIFVAGHRGLVGSAIVRKLQHLGFTNILVRAHSELDLTRQSDVESFFVA 447
           +++S    KSA++FVAGHRGLVGSAI RKL  LGFTN+++R+H+ELDLTRQSDVE+FF  
Sbjct: 11  SSNSFLAYKSAKVFVAGHRGLVGSAIGRKLTQLGFTNLVLRSHAELDLTRQSDVEAFFAY 70

Query: 448 SKPQYVILAAAKVGGIHANNTYPADFISINLQIQTNVIDSAYRHGVKKLIFLGSSC 615
            KP++VI+AAAKVGGIHANNTYPADFI+INLQIQTNVIDSAYR+G KKL+FLGSSC
Sbjct: 71  EKPEFVIVAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGAKKLLFLGSSC 126


>ref|NP_001242319.1| uncharacterized protein LOC100776301 [Glycine max]
            gi|255634670|gb|ACU17697.1| unknown [Glycine max]
          Length = 326

 Score =  238 bits (607), Expect = 2e-60
 Identities = 111/125 (88%), Positives = 121/125 (96%)
 Frame = +2

Query: 725  MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVRGDKEVVVWGTGNPLREFLHVDDLADSV 904
            MPTNLYGP DNFHPENSHVLPALMRRFHEAKV G KEVVVWGTG+PLREFLHVDDLAD+V
Sbjct: 179  MPTNLYGPYDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAV 238

Query: 905  VFLLDKYSGLDHVNVGSGKEVTIKELAELVREVVGFEGDLVWDSSKPDGTPRKLMDSSKL 1084
            VF+++KYSGL+H+NVGSGKEVTIKELAEL++EVVGFEGDLVWDS+KPDGTPRKLMDSSKL
Sbjct: 239  VFMMEKYSGLEHLNVGSGKEVTIKELAELMKEVVGFEGDLVWDSTKPDGTPRKLMDSSKL 298

Query: 1085 AGLGW 1099
            A LGW
Sbjct: 299  ASLGW 303



 Score =  183 bits (465), Expect = 6e-44
 Identities = 88/116 (75%), Positives = 106/116 (91%)
 Frame = +1

Query: 268 NTDSITLDKSAQIFVAGHRGLVGSAIVRKLQHLGFTNILVRAHSELDLTRQSDVESFFVA 447
           +++S    KSA++FVAGHRGLVGSAIVRKL  LGFTN+++ +H+ELDLTRQSDVE+FF +
Sbjct: 11  SSNSFLAYKSAKVFVAGHRGLVGSAIVRKLTQLGFTNLVLHSHAELDLTRQSDVEAFFAS 70

Query: 448 SKPQYVILAAAKVGGIHANNTYPADFISINLQIQTNVIDSAYRHGVKKLIFLGSSC 615
            KP++VI+AAAKVGGIHANNTYPADFI+INLQIQTNVIDSAYR+G KKL+FLGSSC
Sbjct: 71  EKPEFVIVAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGAKKLLFLGSSC 126


>ref|XP_003625896.1| GDP-L-fucose synthase [Medicago truncatula]
            gi|355500911|gb|AES82114.1| GDP-L-fucose synthase
            [Medicago truncatula]
          Length = 320

 Score =  238 bits (606), Expect = 3e-60
 Identities = 110/125 (88%), Positives = 121/125 (96%)
 Frame = +2

Query: 725  MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVRGDKEVVVWGTGNPLREFLHVDDLADSV 904
            MPTNLYGPNDNFHPENSHVLPALMRRFHEAKV G KEVVVWGTG+PLREFLHVDDLAD+V
Sbjct: 173  MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAV 232

Query: 905  VFLLDKYSGLDHVNVGSGKEVTIKELAELVREVVGFEGDLVWDSSKPDGTPRKLMDSSKL 1084
            VF+++KYSG++H+NVGSGKEVTIKELAE ++EVVGFEGDLVWDS+KPDGTPRKLMDSSKL
Sbjct: 233  VFMMEKYSGVEHLNVGSGKEVTIKELAESMKEVVGFEGDLVWDSTKPDGTPRKLMDSSKL 292

Query: 1085 AGLGW 1099
            A LGW
Sbjct: 293  AALGW 297



 Score =  186 bits (472), Expect = 9e-45
 Identities = 90/120 (75%), Positives = 107/120 (89%)
 Frame = +1

Query: 256 MGGANTDSITLDKSAQIFVAGHRGLVGSAIVRKLQHLGFTNILVRAHSELDLTRQSDVES 435
           MG  N  +    KSA++FV+GHRGLVGSAIVRKL  LGFTN+++R H+ELDLTRQSDVE+
Sbjct: 1   MGSQNAAAFFDYKSAKVFVSGHRGLVGSAIVRKLTQLGFTNLILRTHTELDLTRQSDVEA 60

Query: 436 FFVASKPQYVILAAAKVGGIHANNTYPADFISINLQIQTNVIDSAYRHGVKKLIFLGSSC 615
           FF ++KP++VI+AAAKVGGIHANNTYPADFI+INLQIQTNVIDSAYR+G KKL+FLGSSC
Sbjct: 61  FFASTKPEFVIVAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRNGAKKLLFLGSSC 120


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