BLASTX nr result

ID: Panax21_contig00006273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006273
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94808.1| unknown [Populus trichocarpa]                           90   4e-16
ref|XP_004144518.1| PREDICTED: uncharacterized protein LOC101206...    89   6e-16
ref|XP_002327309.1| predicted protein [Populus trichocarpa] gi|2...    80   4e-13
ref|XP_002277888.1| PREDICTED: uncharacterized protein LOC100262...    73   3e-11
emb|CAB77588.1| putative protein [Arabidopsis thaliana]                72   6e-11

>gb|ABK94808.1| unknown [Populus trichocarpa]
          Length = 238

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 74/210 (35%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
 Frame = -3

Query: 541 MARTNKYASLNFNDIYEKKIINNPXXXXXXXXXXXXXXXXXXXXXTILSNS--------- 389
           MAR NKYAS+NFN + +K I N+                          NS         
Sbjct: 1   MARANKYASVNFNHVCDKNISNSTSSNNTNNNPSKHQSSTSFYSTISSPNSPNNLYKSHL 60

Query: 388 -----RIHGNMLVLXXXXXXXXXXXXXXXXXXXXXXXXPDQTRI----------ESDSIS 254
                R HG MLVL                          Q ++          ESD IS
Sbjct: 61  PSSSTRTHGRMLVLTRTTPKPIPSIQTPPLTPSPKTPPAHQAQVQIPVQTEAEPESDRIS 120

Query: 253 LHPLGRTGSGLSISPSPVTSPLLNKDRELSV-SPKPDKFVPPHLRPGYLCKEEKPGPEFH 77
           L PLGRTG+G SI+ SPV      K+   SV SPK DKFVPPHLRPG++ +EEKPGPE  
Sbjct: 121 LRPLGRTGAG-SIASSPVHGQEKQKEVGSSVGSPKSDKFVPPHLRPGFVGREEKPGPEVF 179

Query: 76  KQPLSALSREFAGYRQGQF-----GFAEEG 2
           +       +E    +Q QF      F EEG
Sbjct: 180 R------GKEVGQRQQQQFFGSPDRFGEEG 203


>ref|XP_004144518.1| PREDICTED: uncharacterized protein LOC101206223 [Cucumis sativus]
           gi|449508868|ref|XP_004163431.1| PREDICTED:
           uncharacterized protein LOC101231399 [Cucumis sativus]
          Length = 229

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 63/168 (37%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
 Frame = -3

Query: 541 MARTNKYASLNFNDIYEKKII------NNPXXXXXXXXXXXXXXXXXXXXXTILSNSRIH 380
           MA+TNKY S+NFN IY+K +       NNP                      I S ++ H
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSS-ISSPNKSH 59

Query: 379 GNMLVLXXXXXXXXXXXXXXXXXXXXXXXXPDQTRI--------ESDSISLHPLGRTGSG 224
           G MLVL                         D   +        +SDSISL PLGRTG+G
Sbjct: 60  GRMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTG 119

Query: 223 LSISPSPVTSPLLNKDRELS----VSPKPDKFVPPHLRPGYLCKEEKP 92
            +I+PSP+  P+L KDRE++       KP+KFVPPHLR G++ KEE+P
Sbjct: 120 -AIAPSPI--PVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERP 164


>ref|XP_002327309.1| predicted protein [Populus trichocarpa] gi|222835679|gb|EEE74114.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 59/148 (39%), Positives = 72/148 (48%), Gaps = 16/148 (10%)
 Frame = -3

Query: 397 SNSRIHGNMLVLXXXXXXXXXXXXXXXXXXXXXXXXPDQTRI----------ESDSISLH 248
           S++R HG MLVL                          Q ++          ESD ISL 
Sbjct: 2   SSTRTHGRMLVLTRTTPKPIPSIQTPPLTPSPKTPPAHQAQVQIPVQTEAEPESDRISLR 61

Query: 247 PLGRTGSGLSISPSPVTSPLLNKDRELSV-SPKPDKFVPPHLRPGYLCKEEKPGPEFHKQ 71
           PLGRTG+G SI+ SPV      K+   SV SPK DKFVPPHLRPG++ +EEKPGPE  + 
Sbjct: 62  PLGRTGAG-SIASSPVHGQEKQKEVGSSVGSPKSDKFVPPHLRPGFVGREEKPGPEVFR- 119

Query: 70  PLSALSREFAGYRQGQF-----GFAEEG 2
                 +E    +Q QF      F EEG
Sbjct: 120 -----GKEVGQRQQQQFFGSPDRFGEEG 142


>ref|XP_002277888.1| PREDICTED: uncharacterized protein LOC100262549 [Vitis vinifera]
          Length = 192

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 58/173 (33%), Positives = 74/173 (42%)
 Frame = -3

Query: 535 RTNKYASLNFNDIYEKKIINNPXXXXXXXXXXXXXXXXXXXXXTILSNSRIHGNMLVLXX 356
           RTNKYAS+NFN ++     ++                      + L+ +R HG MLVL  
Sbjct: 4   RTNKYASINFNHLFHNNS-HSTAATTATSAPSSSSSSPSNSYKSHLAATRTHGGMLVLSR 62

Query: 355 XXXXXXXXXXXXXXXXXXXXXXPDQTRIESDSISLHPLGRTGSGLSISPSPVTSPLLNKD 176
                                   Q R E DS++  PLGR  +G   SPSP         
Sbjct: 63  PTPKAQPQLPPPQKQQPPPPPI--QARPEQDSLAPLPLGRAQAG---SPSP--------- 108

Query: 175 RELSVSPKPDKFVPPHLRPGYLCKEEKPGPEFHKQPLSALSREFAGYRQGQFG 17
              S   KPD+FVPPHLRPG++ +EEKPG EF  +P           RQG FG
Sbjct: 109 ---SSPSKPDRFVPPHLRPGFVGREEKPGLEFQIRP----------NRQGNFG 148


>emb|CAB77588.1| putative protein [Arabidopsis thaliana]
          Length = 259

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 62/196 (31%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
 Frame = -3

Query: 529 NKYASLNFNDIYEKKIINNPXXXXXXXXXXXXXXXXXXXXXTILSNSRIHGNMLVLXXXX 350
           NKY S+NFN I  K   ++                         S +R +G MLVL    
Sbjct: 7   NKYTSINFNHILHKDPPSSSSSSSSASYS---------------SVARSNGRMLVLTKSS 51

Query: 349 XXXXXXXXXXXXXXXXXXXXPDQTRIESDS---------ISLHPLGRTGSGLSISPSPVT 197
                                   RI S+          ISL PLG TGS  S+S  P+ 
Sbjct: 52  PKPLRSPSAAPTTTTTAPPISTAPRIPSNQAISDPDPSQISLRPLGHTGSSSSLS-FPIR 110

Query: 196 SPLLNKDREL------SVSPKPDKFVPPHLRPGYLCKEEKPGPEFH--KQPLSALSREFA 41
           +P +NK  E+      S+SPKPD+FVPPHLRPG++ K+EKPG      + P   L++   
Sbjct: 111 TPEINKAPEVNAPTPVSLSPKPDRFVPPHLRPGFVRKDEKPGLNSSRVRDPNPNLNQRLP 170

Query: 40  GY---RQGQFGFAEEG 2
                RQ  FG+ + G
Sbjct: 171 NQEQPRQEYFGYGQPG 186


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