BLASTX nr result

ID: Panax21_contig00006263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006263
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284777.1| PREDICTED: stem-specific protein TSJT1 [Viti...   134   6e-30
emb|CAN63710.1| hypothetical protein VITISV_010055 [Vitis vinifera]   134   6e-30
gb|AFK43573.1| unknown [Lotus japonicus]                              133   2e-29
gb|ACJ84334.1| unknown [Medicago truncatula] gi|388510464|gb|AFK...   132   2e-29
ref|XP_004172510.1| PREDICTED: stem-specific protein TSJT1-like ...   131   7e-29

>ref|XP_002284777.1| PREDICTED: stem-specific protein TSJT1 [Vitis vinifera]
           gi|302143042|emb|CBI20337.3| unnamed protein product
           [Vitis vinifera]
          Length = 255

 Score =  134 bits (338), Expect = 6e-30
 Identities = 57/67 (85%), Positives = 64/67 (95%)
 Frame = -2

Query: 377 FAPFPKGCIFHSEGGLMSFEHPMNKMRAMPRVDSEGVMCGANFKVDVYSRVNSIPRVGSE 198
           FAPFP GC+FHS+GGLMSFEHPMNKM+AMPR+DSEGVMCGANFKVDVYSR+NS+PRVGSE
Sbjct: 186 FAPFPTGCMFHSDGGLMSFEHPMNKMKAMPRIDSEGVMCGANFKVDVYSRINSMPRVGSE 245

Query: 197 TNWTEWE 177
            NW+ WE
Sbjct: 246 VNWSNWE 252


>emb|CAN63710.1| hypothetical protein VITISV_010055 [Vitis vinifera]
          Length = 255

 Score =  134 bits (338), Expect = 6e-30
 Identities = 57/67 (85%), Positives = 64/67 (95%)
 Frame = -2

Query: 377 FAPFPKGCIFHSEGGLMSFEHPMNKMRAMPRVDSEGVMCGANFKVDVYSRVNSIPRVGSE 198
           FAPFP GC+FHS+GGLMSFEHPMNKM+AMPR+DSEGVMCGANFKVDVYSR+NS+PRVGSE
Sbjct: 186 FAPFPTGCMFHSDGGLMSFEHPMNKMKAMPRIDSEGVMCGANFKVDVYSRINSMPRVGSE 245

Query: 197 TNWTEWE 177
            NW+ WE
Sbjct: 246 VNWSNWE 252


>gb|AFK43573.1| unknown [Lotus japonicus]
          Length = 254

 Score =  133 bits (334), Expect = 2e-29
 Identities = 58/67 (86%), Positives = 63/67 (94%)
 Frame = -2

Query: 377 FAPFPKGCIFHSEGGLMSFEHPMNKMRAMPRVDSEGVMCGANFKVDVYSRVNSIPRVGSE 198
           FAPFP GC+FHSEGGLMSFEHPMNK++AMPRVDSEGVMCGANFKVD Y+RVNSIPRVGS+
Sbjct: 186 FAPFPTGCMFHSEGGLMSFEHPMNKLKAMPRVDSEGVMCGANFKVDKYTRVNSIPRVGSQ 245

Query: 197 TNWTEWE 177
            NW EWE
Sbjct: 246 ANWMEWE 252


>gb|ACJ84334.1| unknown [Medicago truncatula] gi|388510464|gb|AFK43298.1| unknown
           [Medicago truncatula] gi|388512357|gb|AFK44240.1|
           unknown [Medicago truncatula]
          Length = 253

 Score =  132 bits (333), Expect = 2e-29
 Identities = 57/67 (85%), Positives = 64/67 (95%)
 Frame = -2

Query: 377 FAPFPKGCIFHSEGGLMSFEHPMNKMRAMPRVDSEGVMCGANFKVDVYSRVNSIPRVGSE 198
           FAPFP GC+FHSEGGLMSFEHP+NK++AMPR+DSEGVMCGANFKVD +SRVNSIPRVGSE
Sbjct: 185 FAPFPAGCMFHSEGGLMSFEHPLNKLKAMPRIDSEGVMCGANFKVDKFSRVNSIPRVGSE 244

Query: 197 TNWTEWE 177
           +NW EWE
Sbjct: 245 SNWMEWE 251


>ref|XP_004172510.1| PREDICTED: stem-specific protein TSJT1-like [Cucumis sativus]
          Length = 249

 Score =  131 bits (329), Expect = 7e-29
 Identities = 56/67 (83%), Positives = 62/67 (92%)
 Frame = -2

Query: 377 FAPFPKGCIFHSEGGLMSFEHPMNKMRAMPRVDSEGVMCGANFKVDVYSRVNSIPRVGSE 198
           +APFP GC+FHSEGGLMSFEHPMNKM+AMPR+DSEG MCGANFKVDVY+RVNSIPR GSE
Sbjct: 181 YAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKVDVYTRVNSIPRRGSE 240

Query: 197 TNWTEWE 177
            NW EW+
Sbjct: 241 ANWAEWD 247


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