BLASTX nr result

ID: Panax21_contig00006242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006242
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS79593.1| putative adapitin protein [Ipomoea trifida]             66   2e-10
ref|XP_002270388.1| PREDICTED: AP-2 complex subunit alpha-2 [Vit...    65   3e-10
ref|XP_003540215.1| PREDICTED: AP-2 complex subunit alpha-2-like...    66   5e-10
ref|XP_002527437.1| AP-2 complex subunit alpha, putative [Ricinu...    64   5e-10
ref|XP_004145777.1| PREDICTED: AP-2 complex subunit alpha-1-like...    64   6e-10

>gb|AAS79593.1| putative adapitin protein [Ipomoea trifida]
          Length = 1080

 Score = 65.9 bits (159), Expect(2) = 2e-10
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -2

Query: 266  RAMLCLVRIETDPADRTQLRMTVGSGDPTLTYE 168
            RAMLCL+RIETDPADRTQLRMTV SGDPTLT+E
Sbjct: 956  RAMLCLIRIETDPADRTQLRMTVASGDPTLTFE 988



 Score = 25.0 bits (53), Expect(2) = 2e-10
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = -1

Query: 87   LKEFIKEQLISI 52
            LKEF+KEQL+SI
Sbjct: 989  LKEFVKEQLVSI 1000


>ref|XP_002270388.1| PREDICTED: AP-2 complex subunit alpha-2 [Vitis vinifera]
            gi|297734861|emb|CBI17095.3| unnamed protein product
            [Vitis vinifera]
          Length = 1015

 Score = 65.1 bits (157), Expect(2) = 3e-10
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -2

Query: 266  RAMLCLVRIETDPADRTQLRMTVGSGDPTLTYE 168
            RAMLCL+RIETDPADRTQLRMTV SGDPTLT+E
Sbjct: 939  RAMLCLMRIETDPADRTQLRMTVSSGDPTLTFE 971



 Score = 25.4 bits (54), Expect(2) = 3e-10
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 87   LKEFIKEQLISI 52
            LKEFIKEQL+SI
Sbjct: 972  LKEFIKEQLVSI 983


>ref|XP_003540215.1| PREDICTED: AP-2 complex subunit alpha-2-like [Glycine max]
          Length = 1018

 Score = 66.2 bits (160), Expect(2) = 5e-10
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -2

Query: 266  RAMLCLVRIETDPADRTQLRMTVGSGDPTLTYE 168
            RAMLCLVRIETDPADRTQLRMTV SGDPTLT+E
Sbjct: 935  RAMLCLVRIETDPADRTQLRMTVASGDPTLTFE 967



 Score = 23.5 bits (49), Expect(2) = 5e-10
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -1

Query: 87   LKEFIKEQLISI 52
            +KEFIK+QL+SI
Sbjct: 968  MKEFIKDQLVSI 979


>ref|XP_002527437.1| AP-2 complex subunit alpha, putative [Ricinus communis]
            gi|223533172|gb|EEF34929.1| AP-2 complex subunit alpha,
            putative [Ricinus communis]
          Length = 1018

 Score = 64.3 bits (155), Expect(2) = 5e-10
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = -2

Query: 266  RAMLCLVRIETDPADRTQLRMTVGSGDPTLTYE 168
            R MLCLVRIETDPADRTQLRMTV SGDPTLT+E
Sbjct: 940  RQMLCLVRIETDPADRTQLRMTVASGDPTLTFE 972



 Score = 25.4 bits (54), Expect(2) = 5e-10
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 87   LKEFIKEQLISI 52
            LKEFIKEQL+SI
Sbjct: 973  LKEFIKEQLVSI 984


>ref|XP_004145777.1| PREDICTED: AP-2 complex subunit alpha-1-like [Cucumis sativus]
            gi|449510835|ref|XP_004163776.1| PREDICTED: AP-2 complex
            subunit alpha-1-like [Cucumis sativus]
          Length = 1019

 Score = 63.5 bits (153), Expect(2) = 6e-10
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -2

Query: 266  RAMLCLVRIETDPADRTQLRMTVGSGDPTLTYE 168
            +AMLCLVRIETDPADRTQLRMTV SGDPT+T+E
Sbjct: 937  QAMLCLVRIETDPADRTQLRMTVASGDPTVTFE 969



 Score = 25.8 bits (55), Expect(2) = 6e-10
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -1

Query: 87   LKEFIKEQLISI 52
            LKEFIKEQLISI
Sbjct: 970  LKEFIKEQLISI 981


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