BLASTX nr result

ID: Panax21_contig00006240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006240
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172680.1| PREDICTED: probable inactive poly [ADP-ribos...   136   8e-30
ref|XP_004152554.1| PREDICTED: probable inactive poly [ADP-ribos...   136   8e-30
ref|XP_002318648.1| predicted protein [Populus trichocarpa] gi|2...   122   1e-25
ref|XP_002511397.1| conserved hypothetical protein [Ricinus comm...   120   6e-25
emb|CBI15032.3| unnamed protein product [Vitis vinifera]              119   2e-24

>ref|XP_004172680.1| PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO5-like
           [Cucumis sativus]
          Length = 388

 Score =  136 bits (343), Expect = 8e-30
 Identities = 75/177 (42%), Positives = 109/177 (61%), Gaps = 1/177 (0%)
 Frame = -1

Query: 530 MENITEQNQFSSIPVGTTNGIVNGFKL-LASDKYISIQEFDNRFMHSGIEQDSSSGSDHD 354
           MEN  +Q Q    P G  +   NG ++ + S K     +F +RF  +G   DSS+G DHD
Sbjct: 1   MENNQDQCQLQFQPFGNGHRFENGVEVFVGSSKNTGNDDFSDRFSDAG---DSSTGHDHD 57

Query: 353 YQDPSVSDCESGISGSNNEEIQSVDNGLIKVDEGERLYETVSLRLISGLGNLGVNTKVVA 174
                VSD ESGISG + E+++  + GL+K+ E +++Y+ +  R +SGLG LG  T V A
Sbjct: 58  ---SVVSDSESGISGPSMEQLEWRNEGLVKLVEEDKIYDLIKRRFVSGLGLLGPQTTVSA 114

Query: 173 IYRNPFSGFTNQARFQSFCIFERAMGRKCGGDANVKYAWYGGSKDEISRIISHGFGH 3
           +Y+N  S    QAR  +F I+ +A+ +K GG+ANVKYAW G SKD+I+ I+ +GF H
Sbjct: 115 VYKNSHSTHIGQARLHTFQIYSKAVEKKNGGNANVKYAWLGASKDQINSILGYGFSH 171


>ref|XP_004152554.1| PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO5-like
           [Cucumis sativus]
          Length = 388

 Score =  136 bits (343), Expect = 8e-30
 Identities = 75/177 (42%), Positives = 109/177 (61%), Gaps = 1/177 (0%)
 Frame = -1

Query: 530 MENITEQNQFSSIPVGTTNGIVNGFKL-LASDKYISIQEFDNRFMHSGIEQDSSSGSDHD 354
           MEN  +Q Q    P G  +   NG ++ + S K     +F +RF  +G   DSS+G DHD
Sbjct: 1   MENNQDQCQLQFQPFGNGHRFENGVEVFVGSSKNTGNDDFSDRFSDAG---DSSTGHDHD 57

Query: 353 YQDPSVSDCESGISGSNNEEIQSVDNGLIKVDEGERLYETVSLRLISGLGNLGVNTKVVA 174
                VSD ESGISG + E+++  + GL+K+ E +++Y+ +  R +SGLG LG  T V A
Sbjct: 58  ---SVVSDSESGISGPSMEQLEWRNEGLVKLVEEDKIYDLIKRRFVSGLGLLGPQTTVSA 114

Query: 173 IYRNPFSGFTNQARFQSFCIFERAMGRKCGGDANVKYAWYGGSKDEISRIISHGFGH 3
           +Y+N  S    QAR  +F I+ +A+ +K GG+ANVKYAW G SKD+I+ I+ +GF H
Sbjct: 115 VYKNSHSTHIGQARLHTFQIYSKAVEKKNGGNANVKYAWLGASKDQINSILGYGFSH 171


>ref|XP_002318648.1| predicted protein [Populus trichocarpa] gi|222859321|gb|EEE96868.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  122 bits (307), Expect = 1e-25
 Identities = 55/106 (51%), Positives = 79/106 (74%)
 Frame = -1

Query: 326 ESGISGSNNEEIQSVDNGLIKVDEGERLYETVSLRLISGLGNLGVNTKVVAIYRNPFSGF 147
           ES  SG+++ ++ S ++GL+++ EG+R+++ +  R +SGLG LG    VVAI+RN +SG 
Sbjct: 2   ESSSSGASSGQLPSFNDGLVRLFEGDRVHDLIKRRFVSGLGLLGKQATVVAIHRNSYSGV 61

Query: 146 TNQARFQSFCIFERAMGRKCGGDANVKYAWYGGSKDEISRIISHGF 9
             QAR QSF IF +AM +KCGGDANVK+ WYGG++DEI  I+ HGF
Sbjct: 62  LEQARMQSFQIFAKAMEKKCGGDANVKFGWYGGTRDEICEIVKHGF 107


>ref|XP_002511397.1| conserved hypothetical protein [Ricinus communis]
           gi|223550512|gb|EEF51999.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 374

 Score =  120 bits (301), Expect = 6e-25
 Identities = 76/173 (43%), Positives = 100/173 (57%), Gaps = 5/173 (2%)
 Frame = -1

Query: 509 NQFSSIPVGTTNGI-VNGFKLLASDKYISIQEFDNRFMHSGIEQDSSSGSDHDYQDPSVS 333
           N  SSI V  TNG  V+      S   + I            EQ  S  SD +    +V+
Sbjct: 2   NYSSSIRVADTNGFFVDSPSTKLSKHTLDISN----------EQTQSENSDLE----TVN 47

Query: 332 DCESGISGS---NNEEIQSVDNGLIKVDEGERLYETVSLRLISGLGNLGVNTKVVAIYRN 162
           D ES IS S   N+ +    D+GL+++ EG+R+ + +  R ISGLG LG    VVAI+RN
Sbjct: 48  DQESVISDSESVNSSQFPEFDDGLVRLSEGDRVNDLIKRRFISGLGLLGKQATVVAIHRN 107

Query: 161 PFSGFTNQARFQSFCIFERAMGRKCGGDANVKYAWYG-GSKDEISRIISHGFG 6
            +SG   QAR QSF IF +AM  KCGG+ANVKYAW+G  S+D+I  I++HGFG
Sbjct: 108 KYSGIVGQARMQSFQIFTKAMEDKCGGNANVKYAWFGASSRDDICNIMTHGFG 160


>emb|CBI15032.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  119 bits (297), Expect = 2e-24
 Identities = 61/115 (53%), Positives = 81/115 (70%)
 Frame = -1

Query: 347 DPSVSDCESGISGSNNEEIQSVDNGLIKVDEGERLYETVSLRLISGLGNLGVNTKVVAIY 168
           + SVSDCESG +  +NE I    +GL+++DE E+L+  +   L+SGLG L  +T VV I+
Sbjct: 21  EASVSDCESGTT--HNEHI----HGLVRLDEDEKLHRIIEKALVSGLGPLRQHTSVVDIH 74

Query: 167 RNPFSGFTNQARFQSFCIFERAMGRKCGGDANVKYAWYGGSKDEISRIISHGFGH 3
           RN ++   +QAR QSF IF RA+ +KC G+ANVK+ WY  SKDEI RIISHGF H
Sbjct: 75  RNGYASVISQARLQSFRIFGRAVEKKCEGNANVKFGWYSASKDEIGRIISHGFSH 129


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