BLASTX nr result

ID: Panax21_contig00006220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006220
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512065.1| SP1L, putative [Ricinus communis] gi|2235492...    83   3e-14
ref|XP_002267630.1| PREDICTED: uncharacterized protein LOC100245...    76   3e-12
emb|CAN70558.1| hypothetical protein VITISV_027475 [Vitis vinifera]    76   3e-12
gb|AAU05601.1| hypothetical protein [Fragaria x ananassa]              76   3e-12
ref|XP_002311347.1| predicted protein [Populus trichocarpa] gi|1...    75   7e-12

>ref|XP_002512065.1| SP1L, putative [Ricinus communis] gi|223549245|gb|EEF50734.1| SP1L,
           putative [Ricinus communis]
          Length = 113

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 8/85 (9%)
 Frame = -2

Query: 232 EAPKPSVNNTQATLNNVQVVNHSPKSRSA--SEPVDVSKQIPAGIXXXXXXXXXXXN--- 68
           EAPKP+  N Q   N+ QVVN  P S+ A  S+PVD+SKQ+PAGI           +   
Sbjct: 22  EAPKPTRKNAQPAPNDAQVVNDLPPSKPAVASQPVDISKQVPAGINSTSTNNYMRADGQN 81

Query: 67  ---FLTERPSTKVHSAPGGGSSLGY 2
              FLT+RPSTKVH+APGGGSSLGY
Sbjct: 82  TGNFLTDRPSTKVHAAPGGGSSLGY 106


>ref|XP_002267630.1| PREDICTED: uncharacterized protein LOC100245217 isoform 3 [Vitis
           vinifera] gi|225455143|ref|XP_002267545.1| PREDICTED:
           uncharacterized protein LOC100245217 isoform 1 [Vitis
           vinifera] gi|302144019|emb|CBI23124.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 8/85 (9%)
 Frame = -2

Query: 232 EAPKPSVNNTQATLNNVQVVNH--SPKSRSASEPVDVSKQIPAGIXXXXXXXXXXXN--- 68
           EAPKP+ NN     +    VN+  SPK  + ++PVDV+KQIPAGI           +   
Sbjct: 22  EAPKPASNNAPVPPSEAPAVNNGPSPKPTAPAQPVDVTKQIPAGIHGNLANNYYRADGQN 81

Query: 67  ---FLTERPSTKVHSAPGGGSSLGY 2
              F+T+RPSTKVH+APGGGSSLGY
Sbjct: 82  CGNFITDRPSTKVHAAPGGGSSLGY 106


>emb|CAN70558.1| hypothetical protein VITISV_027475 [Vitis vinifera]
          Length = 122

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 8/85 (9%)
 Frame = -2

Query: 232 EAPKPSVNNTQATLNNVQVVNH--SPKSRSASEPVDVSKQIPAGIXXXXXXXXXXXN--- 68
           EAPKP+ NN     +    VN+  SPK  + ++PVDV+KQIPAGI           +   
Sbjct: 22  EAPKPASNNAPVPPSEAPAVNNGPSPKPTAPAQPVDVTKQIPAGIHGNLANNYYRADGQN 81

Query: 67  ---FLTERPSTKVHSAPGGGSSLGY 2
              F+T+RPSTKVH+APGGGSSLGY
Sbjct: 82  CGNFITDRPSTKVHAAPGGGSSLGY 106


>gb|AAU05601.1| hypothetical protein [Fragaria x ananassa]
          Length = 140

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/87 (50%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
 Frame = -2

Query: 226 PKPSVNNTQATLNNVQVVNHSPKSRSAS------EPVDVSKQIPAGIXXXXXXXXXXXN- 68
           PKP  NN QA    VQ VN      +AS      EPVD++KQIPAGI           + 
Sbjct: 46  PKPRTNNVQAAPKEVQAVNEPTPKPTASPPPPKPEPVDITKQIPAGIHSTSTNNYMRADG 105

Query: 67  -----FLTERPSTKVHSAPGGGSSLGY 2
                F+T+RPSTKVHSAPGGGSSLGY
Sbjct: 106 QNTGNFITDRPSTKVHSAPGGGSSLGY 132


>ref|XP_002311347.1| predicted protein [Populus trichocarpa] gi|118484460|gb|ABK94106.1|
           unknown [Populus trichocarpa]
           gi|118485184|gb|ABK94453.1| unknown [Populus
           trichocarpa] gi|222851167|gb|EEE88714.1| predicted
           protein [Populus trichocarpa]
          Length = 113

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 8/85 (9%)
 Frame = -2

Query: 232 EAPKPSVNNTQATLNNVQVVNHSPKSRSAS--EPVDVSKQIPAGIXXXXXXXXXXXN--- 68
           EAPKP  NN QA  +     N+ P S+ A+  +P D++KQ+PAGI           +   
Sbjct: 22  EAPKPGTNNAQAAPSESLPANNPPPSKPAAAPQPADINKQVPAGINSTSTNNYLRADGQN 81

Query: 67  ---FLTERPSTKVHSAPGGGSSLGY 2
              F+T+RPSTKVH+APGGGSSLGY
Sbjct: 82  TGNFITDRPSTKVHAAPGGGSSLGY 106


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