BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006214
         (1715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30132.3| unnamed protein product [Vitis vinifera]              575   e-161
ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplast...   575   e-161
sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chlor...   554   e-155
ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus comm...   554   e-155
ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplast...   540   e-151

>emb|CBI30132.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  575 bits (1483), Expect = e-161
 Identities = 295/388 (76%), Positives = 316/388 (81%), Gaps = 1/388 (0%)
 Frame = +3

Query: 555  FSEKGTSFNLRIVSSRNLIQNAESPRAFMSSSIAADAFQESASSKAYGSEQIQVLEGLEA 734
            F +    F LR VS+  LI+NA SPRAFMSSSIA DAFQES SSKAYGSEQIQVLEGL+ 
Sbjct: 20   FFKPRVGFQLRRVSNHFLIRNAASPRAFMSSSIATDAFQESTSSKAYGSEQIQVLEGLDP 79

Query: 735  VRKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKVDVLLCADNSVSIMDNGRGIP 914
            VRKRP MYIGSTG RGLHHLVYEILDNA+DEAQAGFASKVDV+L AD+SVSI DNGRGIP
Sbjct: 80   VRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVVLLADDSVSITDNGRGIP 139

Query: 915  TDLHPATKKSSLETVLTVLHAGGKFXXXXXXXXXXXXXXXXXXXXXNALSEALEVTVMRD 1094
            T+LHP TKKSSLETVLTVLHAGGKF                     NALSEALEVTV RD
Sbjct: 140  TELHPVTKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRD 199

Query: 1095 GKEYQQKYSRGKPMTTLMCRELTAKERDHNGTHIHFWPDKEMFA-EIQLDYNTIAGRIRE 1271
            G EYQQKYSRGKP+T+L  R L  +  D  GTHI FWPDKE+F  EIQ DYNTIAGRIRE
Sbjct: 200  GMEYQQKYSRGKPVTSLTHRVLPTESTDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRE 259

Query: 1272 LAFLNPELTITLLKEDPDLERNQYNEYCYAGGLIEYVRWLNSDKNPLHDVLGFRKEADGI 1451
            LAFLNPEL ITL KED D E+NQYNEYCYAGGL+EYVRWLN+DK P+HDV+GFRK ADGI
Sbjct: 260  LAFLNPELAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVADGI 319

Query: 1452 TIDVALQWCSDAYSDTLLGYANSIRTIDGGTHIDGVKASLTRTLNNLGXXXXXXXXXXXN 1631
            +IDVALQWCSDAYSDT+LGYANSIRTIDGGTHIDG+KASLTRTLNNLG            
Sbjct: 320  SIDVALQWCSDAYSDTMLGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDIT 379

Query: 1632 LSGEHVREGLTCVVSVKVPNPEFEGQTK 1715
            LSGEHVREGLTCV+SVKVPNPEFEGQTK
Sbjct: 380  LSGEHVREGLTCVISVKVPNPEFEGQTK 407


>ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 719

 Score =  575 bits (1481), Expect = e-161
 Identities = 294/381 (77%), Positives = 314/381 (82%), Gaps = 1/381 (0%)
 Frame = +3

Query: 576  FNLRIVSSRNLIQNAESPRAFMSSSIAADAFQESASSKAYGSEQIQVLEGLEAVRKRPAM 755
            F LR VS+  LI+NA SPRAFMSSSIA DAFQES SSKAYGSEQIQVLEGL+ VRKRP M
Sbjct: 39   FQLRRVSNHFLIRNAASPRAFMSSSIATDAFQESTSSKAYGSEQIQVLEGLDPVRKRPGM 98

Query: 756  YIGSTGPRGLHHLVYEILDNAVDEAQAGFASKVDVLLCADNSVSIMDNGRGIPTDLHPAT 935
            YIGSTG RGLHHLVYEILDNA+DEAQAGFASKVDV+L AD+SVSI DNGRGIPT+LHP T
Sbjct: 99   YIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVVLLADDSVSITDNGRGIPTELHPVT 158

Query: 936  KKSSLETVLTVLHAGGKFXXXXXXXXXXXXXXXXXXXXXNALSEALEVTVMRDGKEYQQK 1115
            KKSSLETVLTVLHAGGKF                     NALSEALEVTV RDG EYQQK
Sbjct: 159  KKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEYQQK 218

Query: 1116 YSRGKPMTTLMCRELTAKERDHNGTHIHFWPDKEMFA-EIQLDYNTIAGRIRELAFLNPE 1292
            YSRGKP+T+L  R L  +  D  GTHI FWPDKE+F  EIQ DYNTIAGRIRELAFLNPE
Sbjct: 219  YSRGKPVTSLTHRVLPTESTDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRELAFLNPE 278

Query: 1293 LTITLLKEDPDLERNQYNEYCYAGGLIEYVRWLNSDKNPLHDVLGFRKEADGITIDVALQ 1472
            L ITL KED D E+NQYNEYCYAGGL+EYVRWLN+DK P+HDV+GFRK ADGI+IDVALQ
Sbjct: 279  LAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVADGISIDVALQ 338

Query: 1473 WCSDAYSDTLLGYANSIRTIDGGTHIDGVKASLTRTLNNLGXXXXXXXXXXXNLSGEHVR 1652
            WCSDAYSDT+LGYANSIRTIDGGTHIDG+KASLTRTLNNLG            LSGEHVR
Sbjct: 339  WCSDAYSDTMLGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGEHVR 398

Query: 1653 EGLTCVVSVKVPNPEFEGQTK 1715
            EGLTCV+SVKVPNPEFEGQTK
Sbjct: 399  EGLTCVISVKVPNPEFEGQTK 419


>sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017095|gb|AAR07943.1| DNA gyrase B
            subunit [Nicotiana benthamiana]
          Length = 731

 Score =  554 bits (1428), Expect = e-155
 Identities = 282/379 (74%), Positives = 308/379 (81%), Gaps = 1/379 (0%)
 Frame = +3

Query: 582  LRIVSSRNLIQNAESPRAFMSSSIAADAFQESASSKAYGSEQIQVLEGLEAVRKRPAMYI 761
            LR +S   LI+N  S RAFMSSS   +AFQE+  SK YGSEQIQVLEGL+ VRKRP MYI
Sbjct: 53   LRRLSDAILIRNMVSLRAFMSSSTTTEAFQENTKSKGYGSEQIQVLEGLDPVRKRPGMYI 112

Query: 762  GSTGPRGLHHLVYEILDNAVDEAQAGFASKVDVLLCADNSVSIMDNGRGIPTDLHPATKK 941
            GSTGPRGLHHLVYEILDNAVDEAQAGFA+K+DV+L ADNSVSI DNGRGIPT+LHP TKK
Sbjct: 113  GSTGPRGLHHLVYEILDNAVDEAQAGFATKIDVVLHADNSVSIADNGRGIPTELHPVTKK 172

Query: 942  SSLETVLTVLHAGGKFXXXXXXXXXXXXXXXXXXXXXNALSEALEVTVMRDGKEYQQKYS 1121
            SSLETVLTVLHAGGKF                     NALS+ALEVT+ RDGKEYQQKYS
Sbjct: 173  SSLETVLTVLHAGGKFGGSSSGYNVSGGLHGVGLSVVNALSQALEVTIWRDGKEYQQKYS 232

Query: 1122 RGKPMTTLMCRELTAKERDHNGTHIHFWPDKEMFA-EIQLDYNTIAGRIRELAFLNPELT 1298
            RGKP+TTL+C +L  + RD  GT I FWPDKE+F  E+Q DYNTIAGRIRELAFLNPELT
Sbjct: 233  RGKPITTLICHDLPVEMRDRQGTAIRFWPDKEVFTTEMQFDYNTIAGRIRELAFLNPELT 292

Query: 1299 ITLLKEDPDLERNQYNEYCYAGGLIEYVRWLNSDKNPLHDVLGFRKEADGITIDVALQWC 1478
            I L KED D E+ Q NEY YAGGL+EYV+WLN+DK PLHDVLGFRKEADGITID+ALQWC
Sbjct: 293  IALKKEDIDPEKIQCNEYFYAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMALQWC 352

Query: 1479 SDAYSDTLLGYANSIRTIDGGTHIDGVKASLTRTLNNLGXXXXXXXXXXXNLSGEHVREG 1658
            SDAYSDT+LGYANSIRTIDGGTHIDGVKA+LTR LNNLG           +LSGEHVREG
Sbjct: 353  SDAYSDTMLGYANSIRTIDGGTHIDGVKAALTRILNNLGKKSKTIKEKDISLSGEHVREG 412

Query: 1659 LTCVVSVKVPNPEFEGQTK 1715
            LTCV+SVKVPNPEFEGQTK
Sbjct: 413  LTCVISVKVPNPEFEGQTK 431


>ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
            gi|223538602|gb|EEF40205.1| DNA gyrase subunit B,
            putative [Ricinus communis]
          Length = 732

 Score =  554 bits (1427), Expect = e-155
 Identities = 279/382 (73%), Positives = 309/382 (80%), Gaps = 1/382 (0%)
 Frame = +3

Query: 573  SFNLRIVSSRNLIQNAESPRAFMSSSIAADAFQESASSKAYGSEQIQVLEGLEAVRKRPA 752
            SF  R V+SR  +QNA S RAFMSSS A + FQESASSKAYGS+QIQVL+GLE VRKRP 
Sbjct: 51   SFQWRAVTSRVTVQNAGSARAFMSSSTATEPFQESASSKAYGSDQIQVLKGLEPVRKRPG 110

Query: 753  MYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKVDVLLCADNSVSIMDNGRGIPTDLHPA 932
            MYIGSTGPRGLHHLVYEILDNA+DEAQAG+AS+VDV+L +DNSVSI DNGRGIPTDLHP 
Sbjct: 111  MYIGSTGPRGLHHLVYEILDNAIDEAQAGYASRVDVILHSDNSVSISDNGRGIPTDLHPV 170

Query: 933  TKKSSLETVLTVLHAGGKFXXXXXXXXXXXXXXXXXXXXXNALSEALEVTVMRDGKEYQQ 1112
            TKKS+LETVLTVLHAGGKF                     NALSE LEVTV RDG EY+Q
Sbjct: 171  TKKSALETVLTVLHAGGKFGGSNSGYSVSGGLHGVGLSVVNALSEGLEVTVWRDGMEYRQ 230

Query: 1113 KYSRGKPMTTLMCRELTAKERDHNGTHIHFWPDKEMFAE-IQLDYNTIAGRIRELAFLNP 1289
            +YSRG P+T LMC  L  + RD  GT + FWPDKE+F   I+ DYNTIAGR+RELAFLNP
Sbjct: 231  RYSRGNPVTILMCHSLAVESRDRQGTCVRFWPDKEVFTTAIEFDYNTIAGRVRELAFLNP 290

Query: 1290 ELTITLLKEDPDLERNQYNEYCYAGGLIEYVRWLNSDKNPLHDVLGFRKEADGITIDVAL 1469
            +LTITL KED D E+NQY+EY YAGGLIEYV+WLN+DK PLHDV+GF KE DGITID+AL
Sbjct: 291  KLTITLKKEDNDPEKNQYDEYFYAGGLIEYVKWLNTDKKPLHDVVGFGKEIDGITIDMAL 350

Query: 1470 QWCSDAYSDTLLGYANSIRTIDGGTHIDGVKASLTRTLNNLGXXXXXXXXXXXNLSGEHV 1649
            QWCSDAYSDT+LGYANSIRTIDGGTHIDG KASLTRTLN+LG           NLSGEHV
Sbjct: 351  QWCSDAYSDTILGYANSIRTIDGGTHIDGFKASLTRTLNSLGKKSKIIKEKDINLSGEHV 410

Query: 1650 REGLTCVVSVKVPNPEFEGQTK 1715
            REGLTC+VSVKVP+PEFEGQTK
Sbjct: 411  REGLTCIVSVKVPSPEFEGQTK 432


>ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 719

 Score =  540 bits (1392), Expect = e-151
 Identities = 274/387 (70%), Positives = 309/387 (79%), Gaps = 3/387 (0%)
 Frame = +3

Query: 564  KGTSFN-LRIVSSRNLIQNAE-SPRAFMSSSIAADAFQESASSKAYGSEQIQVLEGLEAV 737
            +G  F  ++I +S  L+ NAE S +AFMSSS A +    S SSKAYGSEQIQVLEGL+ V
Sbjct: 33   RGARFRTMKISTSIRLVPNAEVSSKAFMSSSAATETSTRSESSKAYGSEQIQVLEGLDPV 92

Query: 738  RKRPAMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKVDVLLCADNSVSIMDNGRGIPT 917
            RKRP MYIGSTGPRGLHHLVYEILDNAVDEAQAGFAS++DV+L ADNSVS+ DNGRGIPT
Sbjct: 93   RKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASQIDVVLHADNSVSVADNGRGIPT 152

Query: 918  DLHPATKKSSLETVLTVLHAGGKFXXXXXXXXXXXXXXXXXXXXXNALSEALEVTVMRDG 1097
            DLHP TKKSSLETVLTVLHAGGKF                     NALSE+LEV++ RDG
Sbjct: 153  DLHPVTKKSSLETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVSIWRDG 212

Query: 1098 KEYQQKYSRGKPMTTLMCRELTAKERDHNGTHIHFWPDKEMFAE-IQLDYNTIAGRIREL 1274
             E+ QKYSRGKP + L     +++ ++H GTHI FWPDKE+F   IQ DYNTI+GRIREL
Sbjct: 213  NEFHQKYSRGKPASILTSHVPSSELKNHQGTHIRFWPDKEVFTTGIQFDYNTISGRIREL 272

Query: 1275 AFLNPELTITLLKEDPDLERNQYNEYCYAGGLIEYVRWLNSDKNPLHDVLGFRKEADGIT 1454
            AFLNP+LTITL KED DLE+NQYNEYCYAGGL+EYV WLNSDKNP+H+V GFRKE DG+ 
Sbjct: 273  AFLNPKLTITLTKEDNDLEKNQYNEYCYAGGLVEYVAWLNSDKNPIHEVFGFRKETDGVA 332

Query: 1455 IDVALQWCSDAYSDTLLGYANSIRTIDGGTHIDGVKASLTRTLNNLGXXXXXXXXXXXNL 1634
            IDVALQWC+DAYSDT+LGYANSIRTIDGGTHIDG+KASLTRTLNNLG           +L
Sbjct: 333  IDVALQWCADAYSDTILGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIFKDKDISL 392

Query: 1635 SGEHVREGLTCVVSVKVPNPEFEGQTK 1715
            SGEHVREGLTCVVSV+V NPEFEGQTK
Sbjct: 393  SGEHVREGLTCVVSVRVRNPEFEGQTK 419