BLASTX nr result

ID: Panax21_contig00006202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006202
         (1032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266090.1| PREDICTED: GPN-loop GTPase 3 homolog [Vitis ...    62   2e-07
ref|XP_004148949.1| PREDICTED: GPN-loop GTPase 3-like [Cucumis s...    59   1e-06
ref|XP_002863215.1| ATP-binding family protein [Arabidopsis lyra...    57   7e-06
ref|NP_567393.1| ATP-binding family protein [Arabidopsis thalian...    57   1e-05

>ref|XP_002266090.1| PREDICTED: GPN-loop GTPase 3 homolog [Vitis vinifera]
            gi|296088830|emb|CBI38288.3| unnamed protein product
            [Vitis vinifera]
          Length = 268

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 32/44 (72%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = -2

Query: 1031 YLNPEPQTLLAELNQRMAPQFGKLNKSLIELV-SYKAVRVLKLE 903
            YLNPEP+ LL+ELNQRMAPQFGKLNK+LIELV  Y  V  L L+
Sbjct: 187  YLNPEPRFLLSELNQRMAPQFGKLNKALIELVDEYSMVSFLPLD 230


>ref|XP_004148949.1| PREDICTED: GPN-loop GTPase 3-like [Cucumis sativus]
            gi|449524838|ref|XP_004169428.1| PREDICTED: GPN-loop
            GTPase 3-like [Cucumis sativus]
          Length = 268

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 30/44 (68%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = -2

Query: 1031 YLNPEPQTLLAELNQRMAPQFGKLNKSLIELV-SYKAVRVLKLE 903
            +LNPEPQ LL+ELNQRMAPQF KLNK+LIELV  Y  V  + L+
Sbjct: 187  FLNPEPQVLLSELNQRMAPQFSKLNKALIELVDEYNMVSFVPLD 230


>ref|XP_002863215.1| ATP-binding family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297309049|gb|EFH39474.1| ATP-binding family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 272

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = -2

Query: 1031 YLNPEPQTLLAELNQRMAPQFGKLNKSLIELV 936
            YLNPEP+TLLAELN+RM PQ+ KLNK+LIE+V
Sbjct: 187  YLNPEPRTLLAELNERMGPQYAKLNKALIEMV 218


>ref|NP_567393.1| ATP-binding family protein [Arabidopsis thaliana]
            gi|30682239|ref|NP_849369.1| ATP-binding family protein
            [Arabidopsis thaliana] gi|79325073|ref|NP_001031621.1|
            ATP-binding family protein [Arabidopsis thaliana]
            gi|145333025|ref|NP_001078378.1| ATP-binding family
            protein [Arabidopsis thaliana]
            gi|238480320|ref|NP_001154226.1| ATP-binding family
            protein [Arabidopsis thaliana] gi|17065186|gb|AAL32747.1|
            putative protein [Arabidopsis thaliana]
            gi|21537254|gb|AAM61595.1| putative ATP/GTP-binding
            protein [Arabidopsis thaliana] gi|24899793|gb|AAN65111.1|
            putative protein [Arabidopsis thaliana]
            gi|222423689|dbj|BAH19811.1| AT4G12790 [Arabidopsis
            thaliana] gi|222424170|dbj|BAH20044.1| AT4G12790
            [Arabidopsis thaliana] gi|332657781|gb|AEE83181.1|
            ATP-binding family protein [Arabidopsis thaliana]
            gi|332657782|gb|AEE83182.1| ATP-binding family protein
            [Arabidopsis thaliana] gi|332657783|gb|AEE83183.1|
            ATP-binding family protein [Arabidopsis thaliana]
            gi|332657784|gb|AEE83184.1| ATP-binding family protein
            [Arabidopsis thaliana] gi|332657785|gb|AEE83185.1|
            ATP-binding family protein [Arabidopsis thaliana]
          Length = 271

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = -2

Query: 1031 YLNPEPQTLLAELNQRMAPQFGKLNKSLIELV 936
            YLNPEP+TLLAELN+RM PQ+ KLNK+LIE+V
Sbjct: 187  YLNPEPRTLLAELNKRMGPQYAKLNKALIEMV 218