BLASTX nr result

ID: Panax21_contig00006197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006197
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263798.1| PREDICTED: KH domain-containing protein At1g...   275   3e-72
ref|XP_002331132.1| predicted protein [Populus trichocarpa] gi|1...   271   6e-71
ref|XP_004133720.1| PREDICTED: KH domain-containing protein At1g...   270   8e-71
ref|XP_002526434.1| nucleic acid binding protein, putative [Rici...   270   1e-70
ref|XP_002328717.1| predicted protein [Populus trichocarpa] gi|2...   269   2e-70

>ref|XP_002263798.1| PREDICTED: KH domain-containing protein At1g09660 [Vitis vinifera]
           gi|297739511|emb|CBI29693.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score =  275 bits (703), Expect = 3e-72
 Identities = 137/181 (75%), Positives = 158/181 (87%), Gaps = 4/181 (2%)
 Frame = -1

Query: 541 GLLQRMAPFQASSMGWPASPGLTTTAVVKRVIRLDVPLEKFPNFNFVGRILGPRGNSLKR 362
           G L+RMAPFQASS+GW  +PG+ TT VVKRVIRLDVP++K+PN+NFVGRILGPRGNSLKR
Sbjct: 114 GPLRRMAPFQASSLGWHRAPGIPTTPVVKRVIRLDVPVDKYPNYNFVGRILGPRGNSLKR 173

Query: 361 IEAMTECRIFIRGRGSVKDSMKEEKLKDKPGYEHLNEPLHLLVEAEFPEDMIDSHLDHAV 182
           +EAMTECR++IRG+GSVKD++KEEKLKDKPGYEHLNEPLH+LVEAEF ED+I+S L+ AV
Sbjct: 174 VEAMTECRVYIRGQGSVKDAVKEEKLKDKPGYEHLNEPLHVLVEAEFSEDIINSRLEQAV 233

Query: 181 ALLENLLKPVDESMDLYKKQQLRELAMLNGTLREE----XXXXXXXXXPFNSTGMKRAKT 14
           A+LENLLKPVDES+D YKKQQLRELAMLNGTLREE             PFN+ GMKRAKT
Sbjct: 234 AILENLLKPVDESLDQYKKQQLRELAMLNGTLREESPSMSPSMSPSMSPFNTAGMKRAKT 293

Query: 13  G 11
           G
Sbjct: 294 G 294


>ref|XP_002331132.1| predicted protein [Populus trichocarpa] gi|118487494|gb|ABK95574.1|
           unknown [Populus trichocarpa]
           gi|222872860|gb|EEF09991.1| predicted protein [Populus
           trichocarpa]
          Length = 294

 Score =  271 bits (692), Expect = 6e-71
 Identities = 132/181 (72%), Positives = 156/181 (86%), Gaps = 4/181 (2%)
 Frame = -1

Query: 541 GLLQRMAPFQASSMGWPASPGLTTTAVVKRVIRLDVPLEKFPNFNFVGRILGPRGNSLKR 362
           G LQRMA   A+SMGWP  PG+++T VVKRVIRLDVP++K+PN+NFVGRILGPRGNSLKR
Sbjct: 113 GHLQRMASLPAASMGWPGVPGISSTPVVKRVIRLDVPVDKYPNYNFVGRILGPRGNSLKR 172

Query: 361 IEAMTECRIFIRGRGSVKDSMKEEKLKDKPGYEHLNEPLHLLVEAEFPEDMIDSHLDHAV 182
           +EA+TECR++IRG+GSVKDS+KEEKLKDKPGYEHLNEPLH+LVEAEFPED++++ LDHA+
Sbjct: 173 VEALTECRVYIRGKGSVKDSLKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIMNARLDHAI 232

Query: 181 ALLENLLKPVDESMDLYKKQQLRELAMLNGTLREE----XXXXXXXXXPFNSTGMKRAKT 14
            +LE+LLKPVDES D YKKQQLRELA+LNGTLREE             PFN+ GMKRAKT
Sbjct: 233 TILESLLKPVDESFDNYKKQQLRELALLNGTLREESPSMSPSMSPSMSPFNTAGMKRAKT 292

Query: 13  G 11
           G
Sbjct: 293 G 293


>ref|XP_004133720.1| PREDICTED: KH domain-containing protein At1g09660-like [Cucumis
           sativus] gi|449478123|ref|XP_004155228.1| PREDICTED: KH
           domain-containing protein At1g09660-like [Cucumis
           sativus]
          Length = 289

 Score =  270 bits (691), Expect = 8e-71
 Identities = 128/177 (72%), Positives = 153/177 (86%)
 Frame = -1

Query: 541 GLLQRMAPFQASSMGWPASPGLTTTAVVKRVIRLDVPLEKFPNFNFVGRILGPRGNSLKR 362
           G +  M P QA SMGWP   G+ TT +VKRV+RLDVP++K+PN+NFVGR+LGPRGNSLKR
Sbjct: 112 GHVHGMGPLQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKR 171

Query: 361 IEAMTECRIFIRGRGSVKDSMKEEKLKDKPGYEHLNEPLHLLVEAEFPEDMIDSHLDHAV 182
           +EA+TECR++IRG+GS+KD+++EEKLKDKPGYEHLNEPLHLLVEAEFPED I++ LDHAV
Sbjct: 172 VEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAV 231

Query: 181 ALLENLLKPVDESMDLYKKQQLRELAMLNGTLREEXXXXXXXXXPFNSTGMKRAKTG 11
           A+LE+LLKPVDE +D YKKQQLRELA+LNGTLREE         PFNSTG+KRAKTG
Sbjct: 232 AVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTG 288


>ref|XP_002526434.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223534214|gb|EEF35929.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 295

 Score =  270 bits (690), Expect = 1e-70
 Identities = 131/180 (72%), Positives = 156/180 (86%), Gaps = 4/180 (2%)
 Frame = -1

Query: 541 GLLQRMAPFQASSMGWPASPGLTTTAVVKRVIRLDVPLEKFPNFNFVGRILGPRGNSLKR 362
           G LQRMA FQA+SMGWP  PG+ TT V+K+VIRLDVP++ +P++NFVGRILGPRGNSLKR
Sbjct: 114 GHLQRMASFQAASMGWPGVPGIPTTPVIKKVIRLDVPVDDYPSYNFVGRILGPRGNSLKR 173

Query: 361 IEAMTECRIFIRGRGSVKDSMKEEKLKDKPGYEHLNEPLHLLVEAEFPEDMIDSHLDHAV 182
           +EAMTECR++IRG+GSVKDS+KEEKLKDKPGYEHLNEPLH+LVEAEFPED++D+ ++HAV
Sbjct: 174 VEAMTECRVYIRGKGSVKDSVKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIVDARVEHAV 233

Query: 181 ALLENLLKPVDESMDLYKKQQLRELAMLNGTLREE----XXXXXXXXXPFNSTGMKRAKT 14
            +L++LLKPVDES+D YKKQQLRELAMLNGTLREE             PFN+ GMKRAKT
Sbjct: 234 TILQSLLKPVDESLDHYKKQQLRELAMLNGTLREESPSMSPSMSPSMSPFNTAGMKRAKT 293


>ref|XP_002328717.1| predicted protein [Populus trichocarpa] gi|222839015|gb|EEE77366.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  269 bits (687), Expect = 2e-70
 Identities = 131/181 (72%), Positives = 156/181 (86%), Gaps = 4/181 (2%)
 Frame = -1

Query: 541 GLLQRMAPFQASSMGWPASPGLTTTAVVKRVIRLDVPLEKFPNFNFVGRILGPRGNSLKR 362
           G LQRMA F A+SMGWP  PG+  T VVKRVIRLDVP++K+P++NFVGRILGPRGNSLKR
Sbjct: 113 GHLQRMASFPAASMGWPGVPGIPITPVVKRVIRLDVPVDKYPSYNFVGRILGPRGNSLKR 172

Query: 361 IEAMTECRIFIRGRGSVKDSMKEEKLKDKPGYEHLNEPLHLLVEAEFPEDMIDSHLDHAV 182
           +EA+T+CR++IRG+GSVKDS+KEEKLKDKPGYEHLNEPLH+LVEAEFPED+I++ L+HA+
Sbjct: 173 VEALTDCRVYIRGKGSVKDSLKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINARLEHAI 232

Query: 181 ALLENLLKPVDESMDLYKKQQLRELAMLNGTLREE----XXXXXXXXXPFNSTGMKRAKT 14
            +LE+LLKPVDES+D YKKQQLRELA+LNGTLREE             PFN+ GMKRAKT
Sbjct: 233 TILESLLKPVDESLDHYKKQQLRELALLNGTLREESPSMSPSMSPSMSPFNTAGMKRAKT 292

Query: 13  G 11
           G
Sbjct: 293 G 293


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