BLASTX nr result

ID: Panax21_contig00006187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006187
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285912.1| PREDICTED: T-complex protein 1 subunit beta ...   604   e-171
ref|XP_004141061.1| PREDICTED: T-complex protein 1 subunit beta-...   595   e-168
ref|XP_003623230.1| T-complex protein 1 subunit beta [Medicago t...   593   e-167
ref|XP_003539816.1| PREDICTED: T-complex protein 1 subunit beta-...   591   e-166
gb|ADL36834.1| TCP domain class transcription factor [Malus x do...   591   e-166

>ref|XP_002285912.1| PREDICTED: T-complex protein 1 subunit beta [Vitis vinifera]
           gi|302141688|emb|CBI18891.3| unnamed protein product
           [Vitis vinifera]
          Length = 527

 Score =  604 bits (1558), Expect = e-171
 Identities = 308/332 (92%), Positives = 322/332 (96%)
 Frame = -1

Query: 998 VERLFKDEATEEKGDRARMSSFVGAMAIADLVKTTLGPKGMDKILQSTGRGHSVTVTNDG 819
           ++ LFKD+ATEEKG+RARM+SF+GAMAIADLVKTTLGPKGMDKILQSTGRG SVTVTNDG
Sbjct: 3   IDNLFKDDATEEKGERARMASFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDG 62

Query: 818 ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVFSGELLKEAEKLIATKIHPMTII 639
           ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVV +GELL+EAEKL+A KIHPMTII
Sbjct: 63  ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTII 122

Query: 638 SGYRMAAECARNALLEKVMDNKHDAEKFRTDLMKIAMTTLSSKILSQDKEHFANLAVDAV 459
           SGYRMAAECARNALL+KVMDNK DAEKF+ DLMKIAMTTLSSKILSQDKEHFA LAVDAV
Sbjct: 123 SGYRMAAECARNALLQKVMDNKEDAEKFKLDLMKIAMTTLSSKILSQDKEHFAKLAVDAV 182

Query: 458 MRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD 279
           MRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD
Sbjct: 183 MRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD 242

Query: 278 KVKIYGARVRVDSMSRVAEIEGAEKGKMKEKVQKIIAHGINCFVNRQLIYNFPEELFADA 99
           KVKIYGARVRVDSMSRVA+IEGAEK KM+EKVQKII HGINCFVNRQLIYNFPEELFADA
Sbjct: 243 KVKIYGARVRVDSMSRVAQIEGAEKEKMREKVQKIIGHGINCFVNRQLIYNFPEELFADA 302

Query: 98  GILAIEHADFDGIERLGLVTGGEIASTFDNPE 3
           G+LAIEHADFDGIERL LVTGGEIASTFDNPE
Sbjct: 303 GVLAIEHADFDGIERLALVTGGEIASTFDNPE 334


>ref|XP_004141061.1| PREDICTED: T-complex protein 1 subunit beta-like [Cucumis sativus]
          Length = 527

 Score =  595 bits (1534), Expect = e-168
 Identities = 304/332 (91%), Positives = 322/332 (96%)
 Frame = -1

Query: 998 VERLFKDEATEEKGDRARMSSFVGAMAIADLVKTTLGPKGMDKILQSTGRGHSVTVTNDG 819
           V++L KDEA+EEKG+RARM+SFVGAMAIADLVKTTLGPKGMDKILQSTGRG  VTVTNDG
Sbjct: 3   VDKLLKDEASEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGRQVTVTNDG 62

Query: 818 ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVFSGELLKEAEKLIATKIHPMTII 639
           ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVV +GELL+EAEKL+A+KIHPMTII
Sbjct: 63  ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTII 122

Query: 638 SGYRMAAECARNALLEKVMDNKHDAEKFRTDLMKIAMTTLSSKILSQDKEHFANLAVDAV 459
           +GYRMAAECARNALL+KV+DNK D EKF++DL+KIAMTTLSSKILSQDKEHFA LAVDAV
Sbjct: 123 AGYRMAAECARNALLQKVVDNKADLEKFKSDLLKIAMTTLSSKILSQDKEHFAKLAVDAV 182

Query: 458 MRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD 279
           MRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD
Sbjct: 183 MRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD 242

Query: 278 KVKIYGARVRVDSMSRVAEIEGAEKGKMKEKVQKIIAHGINCFVNRQLIYNFPEELFADA 99
           KVKIYGARVRVDSMS+VAEIEGAEK KM+EKV+KII HGINCFVNRQLIYNFPEELFADA
Sbjct: 243 KVKIYGARVRVDSMSKVAEIEGAEKEKMREKVKKIIGHGINCFVNRQLIYNFPEELFADA 302

Query: 98  GILAIEHADFDGIERLGLVTGGEIASTFDNPE 3
           GILAIEHADFDGIERL LVTGGEIASTFDNPE
Sbjct: 303 GILAIEHADFDGIERLALVTGGEIASTFDNPE 334


>ref|XP_003623230.1| T-complex protein 1 subunit beta [Medicago truncatula]
           gi|355498245|gb|AES79448.1| T-complex protein 1 subunit
           beta [Medicago truncatula]
          Length = 527

 Score =  593 bits (1528), Expect = e-167
 Identities = 303/332 (91%), Positives = 318/332 (95%)
 Frame = -1

Query: 998 VERLFKDEATEEKGDRARMSSFVGAMAIADLVKTTLGPKGMDKILQSTGRGHSVTVTNDG 819
           ++R+FKDEA+EEKG+RARMSSFVGAMAIADLVKTTLGPKGMDKILQSTGRG  VTVTNDG
Sbjct: 3   IDRIFKDEASEEKGERARMSSFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDG 62

Query: 818 ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVFSGELLKEAEKLIATKIHPMTII 639
           ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVV +GELL+EAEKL+A KIHPMTII
Sbjct: 63  ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTII 122

Query: 638 SGYRMAAECARNALLEKVMDNKHDAEKFRTDLMKIAMTTLSSKILSQDKEHFANLAVDAV 459
           +G+RMAAECARNAL+EKV+DNK DAEKFR DLM IA TTLSSKILSQDKEHFA LAVDAV
Sbjct: 123 AGFRMAAECARNALVEKVVDNKEDAEKFRLDLMNIARTTLSSKILSQDKEHFAKLAVDAV 182

Query: 458 MRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD 279
           MRLKGSTNLES+QIIKKPGGSL DSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD
Sbjct: 183 MRLKGSTNLESVQIIKKPGGSLIDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD 242

Query: 278 KVKIYGARVRVDSMSRVAEIEGAEKGKMKEKVQKIIAHGINCFVNRQLIYNFPEELFADA 99
           KVKIYGARVRVDSM++VAEIEGAEK KMKEKV KII HGINCFVNRQLIYNFPEELFADA
Sbjct: 243 KVKIYGARVRVDSMTKVAEIEGAEKEKMKEKVNKIIGHGINCFVNRQLIYNFPEELFADA 302

Query: 98  GILAIEHADFDGIERLGLVTGGEIASTFDNPE 3
           GILAIEHADFDGIERL LVTGGEIASTFDNPE
Sbjct: 303 GILAIEHADFDGIERLALVTGGEIASTFDNPE 334


>ref|XP_003539816.1| PREDICTED: T-complex protein 1 subunit beta-like [Glycine max]
          Length = 527

 Score =  591 bits (1523), Expect = e-166
 Identities = 302/332 (90%), Positives = 320/332 (96%)
 Frame = -1

Query: 998 VERLFKDEATEEKGDRARMSSFVGAMAIADLVKTTLGPKGMDKILQSTGRGHSVTVTNDG 819
           ++ +FK+EA+EEKG+RARM+SFVGAMAIADLVKTTLGPKGMDKILQSTGRG  VTVTNDG
Sbjct: 3   IDNIFKNEASEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDG 62

Query: 818 ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVFSGELLKEAEKLIATKIHPMTII 639
           ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVV +GELL+EAEKL+ATKIHPMTII
Sbjct: 63  ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVATKIHPMTII 122

Query: 638 SGYRMAAECARNALLEKVMDNKHDAEKFRTDLMKIAMTTLSSKILSQDKEHFANLAVDAV 459
           SG+RMAAECARNALLEKV+DNK D+EKFR+DL+ IAMTTLSSKILSQDKEHFA LAVDAV
Sbjct: 123 SGFRMAAECARNALLEKVVDNKADSEKFRSDLLNIAMTTLSSKILSQDKEHFAKLAVDAV 182

Query: 458 MRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD 279
           MRLKGSTNLESIQIIKKPGGSL DSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD
Sbjct: 183 MRLKGSTNLESIQIIKKPGGSLMDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD 242

Query: 278 KVKIYGARVRVDSMSRVAEIEGAEKGKMKEKVQKIIAHGINCFVNRQLIYNFPEELFADA 99
           KVKIYGARVRVDSM+RVA+IE AEK KM+EKVQKII HGINCFVNRQLIYNFPEELFADA
Sbjct: 243 KVKIYGARVRVDSMARVAQIETAEKEKMREKVQKIIGHGINCFVNRQLIYNFPEELFADA 302

Query: 98  GILAIEHADFDGIERLGLVTGGEIASTFDNPE 3
           GILAIEHADFDGIERL LVTGGEIASTFDNPE
Sbjct: 303 GILAIEHADFDGIERLALVTGGEIASTFDNPE 334


>gb|ADL36834.1| TCP domain class transcription factor [Malus x domestica]
          Length = 527

 Score =  591 bits (1523), Expect = e-166
 Identities = 301/332 (90%), Positives = 322/332 (96%)
 Frame = -1

Query: 998 VERLFKDEATEEKGDRARMSSFVGAMAIADLVKTTLGPKGMDKILQSTGRGHSVTVTNDG 819
           VER+FKDEA+EEKG+RAR++SFVGA+AIADLVKTTLGPKGMDKILQSTGRGH+VTVTNDG
Sbjct: 3   VERIFKDEASEEKGERARLASFVGAIAIADLVKTTLGPKGMDKILQSTGRGHAVTVTNDG 62

Query: 818 ATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVFSGELLKEAEKLIATKIHPMTII 639
           ATILKSLHIDN AAKVLVDISKVQDDEVGDGTTSVVV +GELL+EAEKL+A+KIHPMTII
Sbjct: 63  ATILKSLHIDNAAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTII 122

Query: 638 SGYRMAAECARNALLEKVMDNKHDAEKFRTDLMKIAMTTLSSKILSQDKEHFANLAVDAV 459
           SGYRMAAECAR+ALL KV+DNK D+EKF++DLMKIAMTTLSSKILSQDKEHFA LAVDAV
Sbjct: 123 SGYRMAAECARDALLRKVVDNKADSEKFKSDLMKIAMTTLSSKILSQDKEHFAQLAVDAV 182

Query: 458 MRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD 279
           MRLKGSTNLE+IQIIKKPGGSL DSFLDEGFILDKKIG+GQPKRIENA ILVANTAMDTD
Sbjct: 183 MRLKGSTNLEAIQIIKKPGGSLIDSFLDEGFILDKKIGLGQPKRIENANILVANTAMDTD 242

Query: 278 KVKIYGARVRVDSMSRVAEIEGAEKGKMKEKVQKIIAHGINCFVNRQLIYNFPEELFADA 99
           KVKIYGARVRVDSM++VAEIEGAEK KM+EKVQKII HGINCFVNRQLIYNFPEELFADA
Sbjct: 243 KVKIYGARVRVDSMAKVAEIEGAEKDKMREKVQKIIGHGINCFVNRQLIYNFPEELFADA 302

Query: 98  GILAIEHADFDGIERLGLVTGGEIASTFDNPE 3
           GILAIEHADFDGIERL LVTGGEIASTFDNPE
Sbjct: 303 GILAIEHADFDGIERLALVTGGEIASTFDNPE 334


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