BLASTX nr result

ID: Panax21_contig00006181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006181
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234327.1| GRAS10 protein [Solanum lycopersicum] gi|894...   243   3e-62
ref|XP_002272471.1| PREDICTED: scarecrow-like protein 8-like [Vi...   236   6e-60
ref|XP_002305914.1| GRAS family transcription factor [Populus tr...   231   2e-58
gb|ABK94962.1| unknown [Populus trichocarpa]                          231   2e-58
ref|XP_002513664.1| DELLA protein GAI, putative [Ricinus communi...   230   4e-58

>ref|NP_001234327.1| GRAS10 protein [Solanum lycopersicum] gi|89474476|gb|ABD72965.1|
           GRAS10 [Solanum lycopersicum]
          Length = 631

 Score =  243 bits (621), Expect = 3e-62
 Identities = 121/152 (79%), Positives = 134/152 (88%)
 Frame = +1

Query: 1   LLRRVKGLSPKVVTVVEQEMNANTAPFVARVTEACGYYGALFDSLDATATATVAGDNPER 180
           LLRRVK LSPKVVTVVEQ+MN NTAPF+ARV EACG+YGA+FDSLDAT    V  D+ +R
Sbjct: 483 LLRRVKALSPKVVTVVEQDMNGNTAPFLARVNEACGHYGAIFDSLDAT----VPRDSMDR 538

Query: 181 VRIEEGLSRKMANSVACEGRDRVERCEVFGKWRARMGMAGFEARRLSQQLADSLRAKLNS 360
           VRIEEGLSRKM NSVACEGRDRVERCEVFGKWRARM MAGF  + +SQ +A+SLR+KLNS
Sbjct: 539 VRIEEGLSRKMCNSVACEGRDRVERCEVFGKWRARMSMAGFGPKPVSQIVANSLRSKLNS 598

Query: 361 GTRGYPGFTVKEEAGGICFGWMGRTLTVASAW 456
           GTRG PGFTV E++GGICFGWMGRTLTVASAW
Sbjct: 599 GTRGNPGFTVNEQSGGICFGWMGRTLTVASAW 630


>ref|XP_002272471.1| PREDICTED: scarecrow-like protein 8-like [Vitis vinifera]
          Length = 614

 Score =  236 bits (601), Expect = 6e-60
 Identities = 116/152 (76%), Positives = 129/152 (84%)
 Frame = +1

Query: 1   LLRRVKGLSPKVVTVVEQEMNANTAPFVARVTEACGYYGALFDSLDATATATVAGDNPER 180
           LLRRVK L P+VVTVVEQEMNANTAPF+ RV EAC YYGAL DSLD+T    V+ D  ER
Sbjct: 466 LLRRVKSLQPRVVTVVEQEMNANTAPFLTRVNEACAYYGALLDSLDST----VSRDRSER 521

Query: 181 VRIEEGLSRKMANSVACEGRDRVERCEVFGKWRARMGMAGFEARRLSQQLADSLRAKLNS 360
           V++EE L RK+ANSVACEGRDRVERCEVFGKWRARMGMAGFE R +SQ +ADS+R+++NS
Sbjct: 522 VQVEECLGRKLANSVACEGRDRVERCEVFGKWRARMGMAGFEPRPMSQHIADSMRSRVNS 581

Query: 361 GTRGYPGFTVKEEAGGICFGWMGRTLTVASAW 456
             RG PGFTVKEE GGICFGW GRTLTVASAW
Sbjct: 582 HQRGNPGFTVKEETGGICFGWNGRTLTVASAW 613


>ref|XP_002305914.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222848878|gb|EEE86425.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 640

 Score =  231 bits (588), Expect = 2e-58
 Identities = 109/152 (71%), Positives = 129/152 (84%)
 Frame = +1

Query: 1   LLRRVKGLSPKVVTVVEQEMNANTAPFVARVTEACGYYGALFDSLDATATATVAGDNPER 180
           LLRRVKGL+P+VVTVVEQEMN NTAPF+ARV E+C YYGALFDS+++T    V GDN ER
Sbjct: 492 LLRRVKGLAPRVVTVVEQEMNTNTAPFMARVNESCSYYGALFDSIEST----VKGDNSER 547

Query: 181 VRIEEGLSRKMANSVACEGRDRVERCEVFGKWRARMGMAGFEARRLSQQLADSLRAKLNS 360
            ++EEGL R+M NSVACEGRDRVERCEVFGKWRARMGMAGFE + LS  +A+S++ +L+ 
Sbjct: 548 AKVEEGLGRRMVNSVACEGRDRVERCEVFGKWRARMGMAGFELKPLSHNIAESMKTRLSL 607

Query: 361 GTRGYPGFTVKEEAGGICFGWMGRTLTVASAW 456
             R  PGF+VKEE GG+CFGWMG+TLTVASAW
Sbjct: 608 ANRVNPGFSVKEENGGVCFGWMGKTLTVASAW 639


>gb|ABK94962.1| unknown [Populus trichocarpa]
          Length = 521

 Score =  231 bits (588), Expect = 2e-58
 Identities = 109/152 (71%), Positives = 129/152 (84%)
 Frame = +1

Query: 1   LLRRVKGLSPKVVTVVEQEMNANTAPFVARVTEACGYYGALFDSLDATATATVAGDNPER 180
           LLRRVKGL+P+VVTVVEQEMN NTAPF+ARV E+C YYGALFDS+++T    V GDN ER
Sbjct: 373 LLRRVKGLAPRVVTVVEQEMNTNTAPFMARVNESCSYYGALFDSIEST----VKGDNSER 428

Query: 181 VRIEEGLSRKMANSVACEGRDRVERCEVFGKWRARMGMAGFEARRLSQQLADSLRAKLNS 360
            ++EEGL R+M NSVACEGRDRVERCEVFGKWRARMGMAGFE + LS  +A+S++ +L+ 
Sbjct: 429 AKVEEGLGRRMVNSVACEGRDRVERCEVFGKWRARMGMAGFELKPLSHNIAESMKTRLSL 488

Query: 361 GTRGYPGFTVKEEAGGICFGWMGRTLTVASAW 456
             R  PGF+VKEE GG+CFGWMG+TLTVASAW
Sbjct: 489 ANRVNPGFSVKEENGGVCFGWMGKTLTVASAW 520


>ref|XP_002513664.1| DELLA protein GAI, putative [Ricinus communis]
           gi|223547572|gb|EEF49067.1| DELLA protein GAI, putative
           [Ricinus communis]
          Length = 615

 Score =  230 bits (586), Expect = 4e-58
 Identities = 110/152 (72%), Positives = 132/152 (86%)
 Frame = +1

Query: 1   LLRRVKGLSPKVVTVVEQEMNANTAPFVARVTEACGYYGALFDSLDATATATVAGDNPER 180
           LLRRVKGL+P+VVT+VEQEMN NTAPF+ARV E   YYGALF+S+++T    V  D+ ER
Sbjct: 467 LLRRVKGLAPRVVTLVEQEMNTNTAPFMARVNEGSSYYGALFESIEST----VQRDHTER 522

Query: 181 VRIEEGLSRKMANSVACEGRDRVERCEVFGKWRARMGMAGFEARRLSQQLADSLRAKLNS 360
           V++EEGL RK+ANSVACEGRDRVERCEVFGKWRARMGMAGFE + +SQ +A+SL+A+L+S
Sbjct: 523 VKVEEGLGRKLANSVACEGRDRVERCEVFGKWRARMGMAGFELKPVSQNIAESLKARLSS 582

Query: 361 GTRGYPGFTVKEEAGGICFGWMGRTLTVASAW 456
           G R  PGFTVKE+ GG+CFGWMG+TLTVASAW
Sbjct: 583 GNRVNPGFTVKEDNGGVCFGWMGKTLTVASAW 614


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