BLASTX nr result

ID: Panax21_contig00006176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006176
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28236.3| unnamed protein product [Vitis vinifera]              373   e-101
ref|XP_002285365.1| PREDICTED: GTPase-activating protein gyp7-li...   373   e-101
ref|XP_004139297.1| PREDICTED: TBC1 domain family member 15-like...   330   3e-88
ref|XP_002864184.1| hypothetical protein ARALYDRAFT_495330 [Arab...   326   3e-87
ref|NP_001190524.1| RabGAP/TBC domain-containing protein [Arabid...   323   3e-86

>emb|CBI28236.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  373 bits (958), Expect = e-101
 Identities = 189/257 (73%), Positives = 216/257 (84%), Gaps = 2/257 (0%)
 Frame = +1

Query: 1   GAELVYLKDNVSIHPTQYASERIGGRLKLIKQGSSLFMTWIPYKGQNSNARLSERDKNLY 180
           GAE+VY KDNV+IHPTQYASERI GRL+LIKQGSSLFMTWIPYKGQ SN RLSE+DK+LY
Sbjct: 42  GAEIVYSKDNVTIHPTQYASERISGRLRLIKQGSSLFMTWIPYKGQRSNPRLSEKDKSLY 101

Query: 181 TIRAVPFSEIRSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVRDFLATIKQNVFLVR 360
           TIRAVPF+++RSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVR+FLATIKQ+ FLVR
Sbjct: 102 TIRAVPFTDVRSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVREFLATIKQHAFLVR 161

Query: 361 SAEDANVFLVNDFQDPLQRTLSSFELPRAVAVANGLXXXXXXXXXXXXRNHENNNGSDFD 540
           SA+DANVFLVNDFQDPLQRTLSS ELP AV+VANG              N E  +G +FD
Sbjct: 162 SADDANVFLVNDFQDPLQRTLSSLELPMAVSVANGPSTSVSVSEPPSNENQEKADGGNFD 221

Query: 541 GSLSSIQQNGRQRQKSHDPARDLSIQVLEKFSLVTRFTRETTSQLFRE-NSDGFGASEKR 717
           G  ++ Q NGR R K HDPARDLSIQVLEKFSLVT+F R+TTSQLFRE + DGFG++++R
Sbjct: 222 GLGATSQYNGRHRPKIHDPARDLSIQVLEKFSLVTKFARDTTSQLFRESHGDGFGSNDRR 281

Query: 718 NHIQS-HDHPHNMASND 765
           +H QS  D PH  +S++
Sbjct: 282 HHNQSLLDSPHKASSDE 298


>ref|XP_002285365.1| PREDICTED: GTPase-activating protein gyp7-like [Vitis vinifera]
          Length = 657

 Score =  373 bits (958), Expect = e-101
 Identities = 189/257 (73%), Positives = 216/257 (84%), Gaps = 2/257 (0%)
 Frame = +1

Query: 1   GAELVYLKDNVSIHPTQYASERIGGRLKLIKQGSSLFMTWIPYKGQNSNARLSERDKNLY 180
           GAE+VY KDNV+IHPTQYASERI GRL+LIKQGSSLFMTWIPYKGQ SN RLSE+DK+LY
Sbjct: 42  GAEIVYSKDNVTIHPTQYASERISGRLRLIKQGSSLFMTWIPYKGQRSNPRLSEKDKSLY 101

Query: 181 TIRAVPFSEIRSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVRDFLATIKQNVFLVR 360
           TIRAVPF+++RSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVR+FLATIKQ+ FLVR
Sbjct: 102 TIRAVPFTDVRSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVREFLATIKQHAFLVR 161

Query: 361 SAEDANVFLVNDFQDPLQRTLSSFELPRAVAVANGLXXXXXXXXXXXXRNHENNNGSDFD 540
           SA+DANVFLVNDFQDPLQRTLSS ELP AV+VANG              N E  +G +FD
Sbjct: 162 SADDANVFLVNDFQDPLQRTLSSLELPMAVSVANGPSTSVSVSEPPSNENQEKADGGNFD 221

Query: 541 GSLSSIQQNGRQRQKSHDPARDLSIQVLEKFSLVTRFTRETTSQLFRE-NSDGFGASEKR 717
           G  ++ Q NGR R K HDPARDLSIQVLEKFSLVT+F R+TTSQLFRE + DGFG++++R
Sbjct: 222 GLGATSQYNGRHRPKIHDPARDLSIQVLEKFSLVTKFARDTTSQLFRESHGDGFGSNDRR 281

Query: 718 NHIQS-HDHPHNMASND 765
           +H QS  D PH  +S++
Sbjct: 282 HHNQSLLDSPHKASSDE 298


>ref|XP_004139297.1| PREDICTED: TBC1 domain family member 15-like [Cucumis sativus]
          Length = 655

 Score =  330 bits (845), Expect = 3e-88
 Identities = 171/257 (66%), Positives = 200/257 (77%), Gaps = 2/257 (0%)
 Frame = +1

Query: 1   GAELVYLKDNVSIHPTQYASERIGGRLKLIKQGSSLFMTWIPYKGQNSNARLSERDKNLY 180
           GAE+VY K+NV+IHPTQ+ASERI GRL+LIKQGS LF+TWIPYKGQNSNA+LSERD+NLY
Sbjct: 42  GAEVVYSKENVTIHPTQFASERISGRLRLIKQGSCLFITWIPYKGQNSNAKLSERDRNLY 101

Query: 181 TIRAVPFSEIRSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVRDFLATIKQNVFLVR 360
           TIR VPF+E+RSIRRHTP  GWQYVI+VLSSGLAFP LYFYNGGVR+FLAT+KQ+VFLVR
Sbjct: 102 TIRGVPFTEVRSIRRHTPAFGWQYVIIVLSSGLAFPSLYFYNGGVREFLATVKQHVFLVR 161

Query: 361 SAEDANVFLVNDFQDPLQRTLSSFELPRAVAVANGLXXXXXXXXXXXXRNHENNNGSDFD 540
           S EDAN FLVNDFQ+PLQRTLSS ELPR+ ++A+ +             N E   G D  
Sbjct: 162 SEEDANTFLVNDFQNPLQRTLSSLELPRSGSIASAV---SSASVDVSPSNSERRAGEDSH 218

Query: 541 GSLSSIQQ-NGRQRQKSHDPARDLSIQVLEKFSLVTRFTRETTSQLFREN-SDGFGASEK 714
              S I +  G+QR K+ DPARDL IQ+LEKFSLVT+F RETTSQLFREN ++GF  +E 
Sbjct: 219 DERSRISRYGGKQRHKAQDPARDLPIQILEKFSLVTKFARETTSQLFRENHNNGFSVAEM 278

Query: 715 RNHIQSHDHPHNMASND 765
           R   QS       +SND
Sbjct: 279 RIQNQSSLDSPQTSSND 295


>ref|XP_002864184.1| hypothetical protein ARALYDRAFT_495330 [Arabidopsis lyrata subsp.
           lyrata] gi|297310019|gb|EFH40443.1| hypothetical protein
           ARALYDRAFT_495330 [Arabidopsis lyrata subsp. lyrata]
          Length = 674

 Score =  326 bits (836), Expect = 3e-87
 Identities = 162/253 (64%), Positives = 202/253 (79%), Gaps = 1/253 (0%)
 Frame = +1

Query: 4   AELVYLKDNVSIHPTQYASERIGGRLKLIKQGSSLFMTWIPYKGQNSNARLSERDKNLYT 183
           AEL+YLKDNV+IHPTQ+ASERI GRLKL KQ S LF++WIPYKGQ SNA+LSE+D++LYT
Sbjct: 45  AELIYLKDNVAIHPTQFASERISGRLKLTKQDSVLFLSWIPYKGQTSNAKLSEKDRSLYT 104

Query: 184 IRAVPFSEIRSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVRDFLATIKQNVFLVRS 363
           I AVPF+E+RSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVR+FLA +KQ+VFL RS
Sbjct: 105 ITAVPFTEVRSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVREFLAIVKQHVFLARS 164

Query: 364 AEDANVFLVNDFQDPLQRTLSSFELPRAVAVANGLXXXXXXXXXXXXRNHENNNGSDFDG 543
           +ED NVF+VNDFQ PLQRTLSS ELP ++ VA+G               ++    +D   
Sbjct: 165 SEDPNVFIVNDFQSPLQRTLSSLELPSSLPVASG--QSVYPLDGGSSNENQGRTSADIGN 222

Query: 544 SLSSIQQNGRQRQKSHDPARDLSIQVLEKFSLVTRFTRETTSQLFRENSDGFGASEKR-N 720
            +SS+ Q+G ++ KSHDP RDLSI +LEKFSLVT+F R+TT+QLF EN +GFG+ +KR N
Sbjct: 223 RVSSVIQSGLRKHKSHDPTRDLSIHLLEKFSLVTKFARDTTTQLFSEN-NGFGSVDKRWN 281

Query: 721 HIQSHDHPHNMAS 759
           ++  H +P  +++
Sbjct: 282 NLPVHSYPEKLSN 294


>ref|NP_001190524.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana]
           gi|332008855|gb|AED96238.1| RabGAP/TBC domain-containing
           protein [Arabidopsis thaliana]
          Length = 690

 Score =  323 bits (827), Expect = 3e-86
 Identities = 162/253 (64%), Positives = 200/253 (79%), Gaps = 1/253 (0%)
 Frame = +1

Query: 4   AELVYLKDNVSIHPTQYASERIGGRLKLIKQGSSLFMTWIPYKGQNSNARLSERDKNLYT 183
           A L+YLKDNV+IHPTQ+ASERI GRLKL KQ S LF++WIPYKGQ SNA+LSE+D++LYT
Sbjct: 45  AVLIYLKDNVAIHPTQFASERISGRLKLTKQDSVLFLSWIPYKGQTSNAKLSEKDRSLYT 104

Query: 184 IRAVPFSEIRSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVRDFLATIKQNVFLVRS 363
           I AVPF+E+RSIRRHTP LGWQYVIVVLSSGLAFPPLYFYNGGVR+FLA +KQ+VFL RS
Sbjct: 105 ITAVPFTEVRSIRRHTPALGWQYVIVVLSSGLAFPPLYFYNGGVREFLAMVKQHVFLARS 164

Query: 364 AEDANVFLVNDFQDPLQRTLSSFELPRAVAVANGLXXXXXXXXXXXXRNHENNNGSDFDG 543
           +ED NVF+VNDFQ PLQRTLSS ELP ++ VA+G               ++    SD   
Sbjct: 165 SEDQNVFIVNDFQSPLQRTLSSLELPSSLPVASG--QSVYPLDGGSSSENQRRTSSDVGN 222

Query: 544 SLSSIQQNGRQRQKSHDPARDLSIQVLEKFSLVTRFTRETTSQLFRENSDGFGASEKR-N 720
            +SS+ Q+G ++QKSHDP RDLSI +LEKFSLVT+F R+TT+QLF EN +GFG+ +KR N
Sbjct: 223 RVSSVSQSGFRKQKSHDPTRDLSIHLLEKFSLVTKFARDTTTQLFSEN-NGFGSIDKRWN 281

Query: 721 HIQSHDHPHNMAS 759
           +   H +P  +++
Sbjct: 282 NQPVHSYPEKLSN 294


Top