BLASTX nr result
ID: Panax21_contig00006170
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00006170 (749 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300102.1| predicted protein [Populus trichocarpa] gi|1... 136 4e-30 ref|XP_004145671.1| PREDICTED: uncharacterized protein LOC101216... 129 7e-28 ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241... 129 7e-28 emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera] 129 7e-28 pdb|3BBN|U Chain U, Homology Model For The Spinach Chloroplast 3... 129 7e-28 >ref|XP_002300102.1| predicted protein [Populus trichocarpa] gi|118487561|gb|ABK95607.1| unknown [Populus trichocarpa] gi|222847360|gb|EEE84907.1| predicted protein [Populus trichocarpa] Length = 176 Score = 136 bits (343), Expect = 4e-30 Identities = 66/110 (60%), Positives = 79/110 (71%) Frame = -3 Query: 489 TELMSVVCPSLAYANTLFFRSGYNVQVIVDDNEPEEKLLNRFRREVMRAGIIQESKRRKF 310 TEL SVVCPSLAY+NTLFF+S YNVQV+V+DNEPEE+LLNRFRREVMRAG+IQE KRR+F Sbjct: 59 TELSSVVCPSLAYSNTLFFKSAYNVQVVVEDNEPEERLLNRFRREVMRAGVIQECKRRRF 118 Query: 309 HENKQDXXXXXXXXXXXXXXXXXTPFRGGPQDRVETPKSSKKEEDEDNWE 160 HENKQ+ RG Q++ E S K ++D+DNWE Sbjct: 119 HENKQEEKKRKVREAHKRNRRRRPQMRGPFQNKPEASPSKKNDDDDDNWE 168 >ref|XP_004145671.1| PREDICTED: uncharacterized protein LOC101216973 [Cucumis sativus] gi|449523367|ref|XP_004168695.1| PREDICTED: uncharacterized protein LOC101228071 [Cucumis sativus] Length = 183 Score = 129 bits (324), Expect = 7e-28 Identities = 64/109 (58%), Positives = 78/109 (71%) Frame = -3 Query: 486 ELMSVVCPSLAYANTLFFRSGYNVQVIVDDNEPEEKLLNRFRREVMRAGIIQESKRRKFH 307 EL SV+CPSLAYANT+FFRS YNVQV+VDDNEPEE+LLNRFRREVMRAG+IQE KRR+F Sbjct: 67 ELASVICPSLAYANTMFFRSAYNVQVVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFF 126 Query: 306 ENKQDXXXXXXXXXXXXXXXXXTPFRGGPQDRVETPKSSKKEEDEDNWE 160 EN QD R PQ++ + P ++K+E D+DNW+ Sbjct: 127 ENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVP-ATKQEADDDNWD 174 >ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241260 [Vitis vinifera] Length = 188 Score = 129 bits (324), Expect = 7e-28 Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Frame = -3 Query: 489 TELMSVVCPSLAYANTLFFRSGYNVQVIVDDNEPEEKLLNRFRREVMRAGIIQESKRRKF 310 ++LM+VVCPSLAY+NTLFF+S YNVQVIV+DNEPEEKLLNRFRREVMRAG+IQE KRR+F Sbjct: 70 SDLMAVVCPSLAYSNTLFFKSAYNVQVIVEDNEPEEKLLNRFRREVMRAGVIQECKRRRF 129 Query: 309 HENKQDXXXXXXXXXXXXXXXXXTPFRGGPQD-RVETPKSSKKEEDEDNWE 160 ENKQD R QD + E K+ K +++EDNWE Sbjct: 130 FENKQDEKKRKTREAAKRNRRRRPQSRFSTQDSKQEGSKNKKDDDEEDNWE 180 >emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera] Length = 188 Score = 129 bits (324), Expect = 7e-28 Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Frame = -3 Query: 489 TELMSVVCPSLAYANTLFFRSGYNVQVIVDDNEPEEKLLNRFRREVMRAGIIQESKRRKF 310 ++LM+VVCPSLAY+NTLFF+S YNVQVIV+DNEPEEKLLNRFRREVMRAG+IQE KRR+F Sbjct: 70 SDLMAVVCPSLAYSNTLFFKSAYNVQVIVEDNEPEEKLLNRFRREVMRAGVIQECKRRRF 129 Query: 309 HENKQDXXXXXXXXXXXXXXXXXTPFRGGPQD-RVETPKSSKKEEDEDNWE 160 ENKQD R QD + E K+ K +++EDNWE Sbjct: 130 FENKQDEKKRKTREAAKRNRRRRPQSRFSTQDSKQEGSKNKKDDDEEDNWE 180 >pdb|3BBN|U Chain U, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome. gi|17154781|gb|AAL35983.1|AF104396_1 ribosome-like protein [Cucumis sativus] Length = 190 Score = 129 bits (324), Expect = 7e-28 Identities = 64/109 (58%), Positives = 78/109 (71%) Frame = -3 Query: 486 ELMSVVCPSLAYANTLFFRSGYNVQVIVDDNEPEEKLLNRFRREVMRAGIIQESKRRKFH 307 EL SV+CPSLAYANT+FFRS YNVQV+VDDNEPEE+LLNRFRREVMRAG+IQE KRR+F Sbjct: 74 ELASVICPSLAYANTMFFRSAYNVQVVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFF 133 Query: 306 ENKQDXXXXXXXXXXXXXXXXXTPFRGGPQDRVETPKSSKKEEDEDNWE 160 EN QD R PQ++ + P ++K+E D+DNW+ Sbjct: 134 ENTQDVRKRKTREAAKRNRRRRPQARFTPQNKQDVP-ATKQEADDDNWD 181