BLASTX nr result

ID: Panax21_contig00006151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006151
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71227.1| putative rubisco subunit binding-protein alpha s...   344   1e-92
dbj|BAE71311.1| putative rubisco subunit binding-protein alpha s...   344   1e-92
dbj|BAE71231.1| putative rubisco subunit binding-protein alpha s...   344   1e-92
dbj|BAE71304.1| putative rubisco subunit binding-protein alpha s...   344   1e-92
ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro...   343   2e-92

>dbj|BAE71227.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
            pratense]
          Length = 578

 Score =  344 bits (882), Expect = 1e-92
 Identities = 181/212 (85%), Positives = 193/212 (91%)
 Frame = -1

Query: 746  TIIADAASKDEIQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE 567
            TIIADAASKDE+Q+R+AQ+KKEL+ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE
Sbjct: 367  TIIADAASKDELQSRVAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE 426

Query: 566  DRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSAFVPAIKDKLEDAEERLGADIVQKALV 387
            DRKLRIEDAKNATFAAIEEGIVPGGG ALVHLSA+VPAIK+KLEDA+ERLGADIVQKALV
Sbjct: 427  DRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSAYVPAIKEKLEDADERLGADIVQKALV 486

Query: 386  APASLIAQNAGIXXXXXXXXXXXXXXXVGYNAMTDKYENLVEAGVIDPAKVTRCALQNAA 207
            APASLIAQNAGI               VGYNAMTD YENL+E+GVIDPAKVTRCALQNAA
Sbjct: 487  APASLIAQNAGIEGEVVVEKIRNGEWEVGYNAMTDTYENLIESGVIDPAKVTRCALQNAA 546

Query: 206  SVAGMVLTTQAIVVEKAKPKSPVPGVPQGLTV 111
            SVAGMVLTTQAIVVEK KP++PVPG PQGLTV
Sbjct: 547  SVAGMVLTTQAIVVEKPKPRAPVPGAPQGLTV 578


>dbj|BAE71311.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
            pratense]
          Length = 588

 Score =  344 bits (882), Expect = 1e-92
 Identities = 181/212 (85%), Positives = 193/212 (91%)
 Frame = -1

Query: 746  TIIADAASKDEIQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE 567
            TIIADAASKDE+Q+R+AQ+KKEL+ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE
Sbjct: 377  TIIADAASKDELQSRVAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE 436

Query: 566  DRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSAFVPAIKDKLEDAEERLGADIVQKALV 387
            DRKLRIEDAKNATFAAIEEGIVPGGG ALVHLSA+VPAIK+KLEDA+ERLGADIVQKALV
Sbjct: 437  DRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSAYVPAIKEKLEDADERLGADIVQKALV 496

Query: 386  APASLIAQNAGIXXXXXXXXXXXXXXXVGYNAMTDKYENLVEAGVIDPAKVTRCALQNAA 207
            APASLIAQNAGI               VGYNAMTD YENL+E+GVIDPAKVTRCALQNAA
Sbjct: 497  APASLIAQNAGIEGEVVVEKIRNGEWEVGYNAMTDTYENLIESGVIDPAKVTRCALQNAA 556

Query: 206  SVAGMVLTTQAIVVEKAKPKSPVPGVPQGLTV 111
            SVAGMVLTTQAIVVEK KP++PVPG PQGLTV
Sbjct: 557  SVAGMVLTTQAIVVEKPKPRAPVPGAPQGLTV 588


>dbj|BAE71231.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
            pratense] gi|84468304|dbj|BAE71235.1| putative rubisco
            subunit binding-protein alpha subunit [Trifolium
            pratense] gi|84468426|dbj|BAE71296.1| putative rubisco
            subunit binding-protein alpha subunit [Trifolium
            pratense]
          Length = 588

 Score =  344 bits (882), Expect = 1e-92
 Identities = 181/212 (85%), Positives = 193/212 (91%)
 Frame = -1

Query: 746  TIIADAASKDEIQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE 567
            TIIADAASKDE+Q+R+AQ+KKEL+ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE
Sbjct: 377  TIIADAASKDELQSRVAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE 436

Query: 566  DRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSAFVPAIKDKLEDAEERLGADIVQKALV 387
            DRKLRIEDAKNATFAAIEEGIVPGGG ALVHLSA+VPAIK+KLEDA+ERLGADIVQKALV
Sbjct: 437  DRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSAYVPAIKEKLEDADERLGADIVQKALV 496

Query: 386  APASLIAQNAGIXXXXXXXXXXXXXXXVGYNAMTDKYENLVEAGVIDPAKVTRCALQNAA 207
            APASLIAQNAGI               VGYNAMTD YENL+E+GVIDPAKVTRCALQNAA
Sbjct: 497  APASLIAQNAGIEGEVVVEKIRNGEWEVGYNAMTDTYENLIESGVIDPAKVTRCALQNAA 556

Query: 206  SVAGMVLTTQAIVVEKAKPKSPVPGVPQGLTV 111
            SVAGMVLTTQAIVVEK KP++PVPG PQGLTV
Sbjct: 557  SVAGMVLTTQAIVVEKPKPRAPVPGAPQGLTV 588


>dbj|BAE71304.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
           pratense]
          Length = 461

 Score =  344 bits (882), Expect = 1e-92
 Identities = 181/212 (85%), Positives = 193/212 (91%)
 Frame = -1

Query: 746 TIIADAASKDEIQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE 567
           TIIADAASKDE+Q+R+AQ+KKEL+ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE
Sbjct: 250 TIIADAASKDELQSRVAQLKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE 309

Query: 566 DRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSAFVPAIKDKLEDAEERLGADIVQKALV 387
           DRKLRIEDAKNATFAAIEEGIVPGGG ALVHLSA+VPAIK+KLEDA+ERLGADIVQKALV
Sbjct: 310 DRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSAYVPAIKEKLEDADERLGADIVQKALV 369

Query: 386 APASLIAQNAGIXXXXXXXXXXXXXXXVGYNAMTDKYENLVEAGVIDPAKVTRCALQNAA 207
           APASLIAQNAGI               VGYNAMTD YENL+E+GVIDPAKVTRCALQNAA
Sbjct: 370 APASLIAQNAGIEGEVVVEKIRNGEWEVGYNAMTDTYENLIESGVIDPAKVTRCALQNAA 429

Query: 206 SVAGMVLTTQAIVVEKAKPKSPVPGVPQGLTV 111
           SVAGMVLTTQAIVVEK KP++PVPG PQGLTV
Sbjct: 430 SVAGMVLTTQAIVVEKPKPRAPVPGAPQGLTV 461


>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Vitis vinifera]
          Length = 586

 Score =  343 bits (880), Expect = 2e-92
 Identities = 184/212 (86%), Positives = 190/212 (89%)
 Frame = -1

Query: 746  TIIADAASKDEIQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELE 567
            TIIADAASKDEIQARIAQIKKELAETDSVYD+EKLAERIAKLSGGVAVIKVGAATETELE
Sbjct: 375  TIIADAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGVAVIKVGAATETELE 434

Query: 566  DRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSAFVPAIKDKLEDAEERLGADIVQKALV 387
            DRKLRIEDAKNATFAAIEEGIVPGGGAA VHLS +VPAIKDKLEDA+ERLGADIVQKALV
Sbjct: 435  DRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKLEDADERLGADIVQKALV 494

Query: 386  APASLIAQNAGIXXXXXXXXXXXXXXXVGYNAMTDKYENLVEAGVIDPAKVTRCALQNAA 207
            APASLIA NAG+               VGYNAMTDKYENLVEAGVIDPAKV RCALQNAA
Sbjct: 495  APASLIAHNAGVEGEVVVEKIKACEWAVGYNAMTDKYENLVEAGVIDPAKVARCALQNAA 554

Query: 206  SVAGMVLTTQAIVVEKAKPKSPVPGVPQGLTV 111
            SVAGMVLTTQAIVVEKAKPK+PV   PQGLT+
Sbjct: 555  SVAGMVLTTQAIVVEKAKPKAPVAAPPQGLTI 586


Top