BLASTX nr result
ID: Panax21_contig00006149
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00006149
(2051 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263027.2| PREDICTED: uncharacterized protein LOC100265... 222 3e-55
emb|CAN82215.1| hypothetical protein VITISV_020421 [Vitis vinifera] 222 3e-55
emb|CBI18752.3| unnamed protein product [Vitis vinifera] 139 3e-30
ref|XP_002521404.1| DNA repair helicase rad5,16, putative [Ricin... 113 2e-22
ref|XP_002305009.1| hypothetical protein POPTRDRAFT_647732 [Popu... 88 1e-14
>ref|XP_002263027.2| PREDICTED: uncharacterized protein LOC100265351 [Vitis vinifera]
Length = 1430
Score = 222 bits (565), Expect = 3e-55
Identities = 212/744 (28%), Positives = 332/744 (44%), Gaps = 62/744 (8%)
Frame = -1
Query: 2048 SLWNMIEENPGSSENKPEYLPV----------------NIVPQGLLEMEGQSSYGAELPG 1917
S ++++ E+P ++ PE P N P G E+ SS G E
Sbjct: 26 SFYSILGEDPDPMQSSPEDFPFKNVSQDESAPDFGHHDNSQPHGFQELGRASSLGDEFLR 85
Query: 1916 SDTGYYSYNSEISDSRTRTSEGSFDSVAKFVTFDCVKQEPSVQIRPP--NLSASFIDWTS 1743
+S+NSE S S TR S+G F+S + +C K PS P + S S DW S
Sbjct: 86 -----HSFNSEASHSITRGSDGLFESAGNSI-IECAKL-PSAHAGSPVRSGSGSLNDWIS 138
Query: 1742 -----------------EPLCYRQ----DIQFEIPSHLGISSFAAGATDHVSDIGGTLHT 1626
+ L Y + +IQ+EIP+ SFAAG +++ SD L
Sbjct: 139 HVSGQETCCKERSGVSQDALSYNRVDSKEIQYEIPNCSTAFSFAAGNSNYASDYTNGLDL 198
Query: 1625 NYSKGPPY-----------------NWSMEKSDISYGTYGALGDNNSQSL--GERHTEES 1503
N+ G + E SDI G+Y + ++ L G +++ S
Sbjct: 199 NHLNGDTEAQFKHMGVEIHSEYASNSMVTENSDIGLGSYEPAIEKSTGDLVTGGKYSCTS 258
Query: 1502 ---SILNARLSSHSASHTQPSNYELPNIDFPDVGSPYILEFYNQYPHLQYSIGLESPLSF 1332
S+ +A +SSH +HT+ S ++P++ + E Y +QY + + L
Sbjct: 259 MTISLRDADISSHDVNHTESSICQIPDV---------VYENSEDYSAVQYCLSADGSLFS 309
Query: 1331 GSSRQCLTENFGMQSVANNVERMVNVKDEKGKLPTQSAYLRSAMNFEDQLERAGGAVTAA 1152
S Q + + F +Q + ++ E ++N+KDE +L ++ L S MN + +
Sbjct: 310 DPSSQYMPDCFDLQFMPSSEEMLINMKDENEELSAENTCLNSKMNLSQ--DARASSFVQK 367
Query: 1151 SVMINSDVSGLNDDHKGADYILPSCGISSDNAEFGLTVGKASSTQILHPTLSNMSSKKQA 972
+ SDV GLN +H+G++Y+ P+ G SS NA +G + S Q+ + S MS+K++A
Sbjct: 368 GLNNYSDVKGLNFNHEGSNYVSPTSGNSSSNAGYG-SNDDIRSIQLSTCSQSYMSNKRRA 426
Query: 971 VHVKDDKNNELFASQGTAYRSLMAIDGEVGRITHGVANGLSSMKQPFHVKDEKNNELFAP 792
+ +KD++ +EL VA G+ QP V DE N+ F+
Sbjct: 427 ICIKDERKDEL------------------------VAPGIC---QPNEVVDEAVNDRFS- 458
Query: 791 QGTGYRSSIDVDVVGRRP-SRIADGLSRKKHMFHVKDAKNEEPFSAQGTAYRFRMDVDDV 615
G + + D R+ S +S KK++F KD +NE+ + A ++ D++
Sbjct: 459 --LGVDARVFADKNSRQMLSCFPPFISSKKNLFDAKD-ENEDLYLASKRPRHCQVIGDEL 515
Query: 614 SGRKSSGVADGVFADRQXXXXXXXXXXXXSQVVENDEISDILTASNRAHHYLDEDETCTI 435
SGR SG Q++ + + S T SN+ Y+ +++ +
Sbjct: 516 SGRSQSG--------------GGPLDTVSEQLIPSVKQS---TVSNKQLDYIKDEKEGKL 558
Query: 434 ISPVGNSHCQDVQASEQPCLQQSKSVRRQLVPTLEDRDSNLIQSVSMGSQHSNVSHQAVQ 255
I P SMGS S VS +++Q
Sbjct: 559 IQP-----------------------------------------KSMGSYLSKVSPESIQ 577
Query: 254 SNAWVQRSHVDDDSDICILEDLSEPARRNQSPVNGKSHIASQSSSFIDSRSHFEVGGVRL 75
SN+ RSH+DDD+DICILED+SEP R N S + GKS +++Q S DS + V G+R
Sbjct: 578 SNSLDHRSHIDDDTDICILEDISEPVRSNSSLLLGKSLVSTQRYS--DSLHNTGVVGMRN 635
Query: 74 KTNDERIIFHAALQDLSQPKSEAT 3
+TNDER+IF ALQDLSQPKSEA+
Sbjct: 636 RTNDERLIFRVALQDLSQPKSEAS 659
>emb|CAN82215.1| hypothetical protein VITISV_020421 [Vitis vinifera]
Length = 1435
Score = 222 bits (565), Expect = 3e-55
Identities = 212/744 (28%), Positives = 332/744 (44%), Gaps = 62/744 (8%)
Frame = -1
Query: 2048 SLWNMIEENPGSSENKPEYLPV----------------NIVPQGLLEMEGQSSYGAELPG 1917
S ++++ E+P ++ PE P N P G E+ SS G E
Sbjct: 30 SFYSILGEDPDPMQSSPEDFPFKNVSQDESAPDFGHHDNSQPHGFQELGRASSLGDEFLR 89
Query: 1916 SDTGYYSYNSEISDSRTRTSEGSFDSVAKFVTFDCVKQEPSVQIRPP--NLSASFIDWTS 1743
+S+NSE S S TR S+G F+S + +C K PS P + S S DW S
Sbjct: 90 -----HSFNSEASHSITRGSDGLFESAGNSI-IECAKL-PSAHAGSPVRSGSGSLNDWIS 142
Query: 1742 -----------------EPLCYRQ----DIQFEIPSHLGISSFAAGATDHVSDIGGTLHT 1626
+ L Y + +IQ+EIP+ SFAAG +++ SD L
Sbjct: 143 HVSGQETCCKERSGVSQDALLYNRVDSKEIQYEIPNCSTAFSFAAGNSNYASDYTNGLDL 202
Query: 1625 NYSKGPPY-----------------NWSMEKSDISYGTYGALGDNNSQSL--GERHTEES 1503
N+ G + E SDI G+Y + ++ L G +++ S
Sbjct: 203 NHLNGDTEAQFKHMGVEIHSEYASNSMVTENSDIGLGSYEPAIEKSTGDLVTGGKYSCTS 262
Query: 1502 ---SILNARLSSHSASHTQPSNYELPNIDFPDVGSPYILEFYNQYPHLQYSIGLESPLSF 1332
S+ +A +SSH +HT+ S ++P++ + E Y +QY + + L
Sbjct: 263 MTISLRDADISSHDVNHTESSICQIPDV---------VYENSEDYSAVQYCLSADGSLFS 313
Query: 1331 GSSRQCLTENFGMQSVANNVERMVNVKDEKGKLPTQSAYLRSAMNFEDQLERAGGAVTAA 1152
S Q + + F +Q + ++ E ++N+KDE +L ++ L S MN + +
Sbjct: 314 DPSSQYMPDCFDLQFMPSSEEMLINMKDENEELSAENTCLNSQMNLSQ--DARASSFVQK 371
Query: 1151 SVMINSDVSGLNDDHKGADYILPSCGISSDNAEFGLTVGKASSTQILHPTLSNMSSKKQA 972
+ SDV GLN +H+G++Y+ P+ G SS NA +G + S Q+ + S MS+K++A
Sbjct: 372 GLNNYSDVKGLNFNHEGSNYVSPTSGNSSSNAGYG-SNDDIRSIQLSTCSQSYMSNKRRA 430
Query: 971 VHVKDDKNNELFASQGTAYRSLMAIDGEVGRITHGVANGLSSMKQPFHVKDEKNNELFAP 792
+ +KD++ +EL VA G+ QP V DE N+ F+
Sbjct: 431 ICIKDERKDEL------------------------VAPGIC---QPNEVVDEAVNDRFS- 462
Query: 791 QGTGYRSSIDVDVVGRRP-SRIADGLSRKKHMFHVKDAKNEEPFSAQGTAYRFRMDVDDV 615
G + + D R+ S +S KK++F KD +NE+ + A ++ D++
Sbjct: 463 --LGVDARVFADKNSRQMLSCFPPFISSKKNLFDAKD-ENEDLYLASKRPRHCQVIGDEL 519
Query: 614 SGRKSSGVADGVFADRQXXXXXXXXXXXXSQVVENDEISDILTASNRAHHYLDEDETCTI 435
SGR SG Q++ + + S T SN+ Y+ +++ +
Sbjct: 520 SGRSQSG--------------GGPLDTVSEQLIPSVKQS---TVSNKQLDYIKDEKEGKL 562
Query: 434 ISPVGNSHCQDVQASEQPCLQQSKSVRRQLVPTLEDRDSNLIQSVSMGSQHSNVSHQAVQ 255
I P SMGS S VS +++Q
Sbjct: 563 IQP-----------------------------------------KSMGSYLSKVSPESIQ 581
Query: 254 SNAWVQRSHVDDDSDICILEDLSEPARRNQSPVNGKSHIASQSSSFIDSRSHFEVGGVRL 75
SN+ RSH+DDD+DICILED+SEP R N S + GKS +++Q S DS + V G+R
Sbjct: 582 SNSLDHRSHIDDDTDICILEDISEPVRSNSSLLLGKSLVSTQRYS--DSLHNTGVVGMRN 639
Query: 74 KTNDERIIFHAALQDLSQPKSEAT 3
+TNDER+IF ALQDLSQPKSEA+
Sbjct: 640 RTNDERLIFRVALQDLSQPKSEAS 663
>emb|CBI18752.3| unnamed protein product [Vitis vinifera]
Length = 1187
Score = 139 bits (350), Expect = 3e-30
Identities = 143/525 (27%), Positives = 234/525 (44%), Gaps = 47/525 (8%)
Frame = -1
Query: 2027 ENPGSSENKPEY-LPVNIVPQGLLEMEGQSSYGAELPGSDTGYYSYNSEISDSRTRTSEG 1851
+N E+ P++ N P G E+ SS G E +S+NSE S S TR S+G
Sbjct: 15 KNVSQDESAPDFGHHDNSQPHGFQELGRASSLGDEFLR-----HSFNSEASHSITRGSDG 69
Query: 1850 SFDSVAKFVTFDCVKQEPSVQIRPP--NLSASFIDWTS-----------------EPLCY 1728
F+S + +C K PS P + S S DW S + L Y
Sbjct: 70 LFESAGNSI-IECAKL-PSAHAGSPVRSGSGSLNDWISHVSGQETCCKERSGVSQDALSY 127
Query: 1727 RQ----DIQFEIPSHLGISSFAAGATDHVSDIGGTLHTNYSKGPPY-------------- 1602
+ +IQ+EIP+ SFAAG +++ SD L N+ G
Sbjct: 128 NRVDSKEIQYEIPNCSTAFSFAAGNSNYASDYTNGLDLNHLNGDTEAQFKHMGVEIHSEY 187
Query: 1601 ---NWSMEKSDISYGTYGALGDNNSQSL--GERHTEES---SILNARLSSHSASHTQPSN 1446
+ E SDI G+Y + ++ L G +++ S S+ +A +SSH +HT+ S
Sbjct: 188 ASNSMVTENSDIGLGSYEPAIEKSTGDLVTGGKYSCTSMTISLRDADISSHDVNHTESSI 247
Query: 1445 YELPNIDFPDVGSPYILEFYNQYPHLQYSIGLESPLSFGSSRQCLTENFGMQSVANNVER 1266
++P++ + E Y +QY + + L S Q + + F +Q + ++ E
Sbjct: 248 CQIPDV---------VYENSEDYSAVQYCLSADGSLFSDPSSQYMPDCFDLQFMPSSEEM 298
Query: 1265 MVNVKDEKGKLPTQSAYLRSAMNFEDQLERAGGAVTAASVMINSDVSGLNDDHKGADYIL 1086
++N+KDE +L ++ L S MN + + + SDV GLN +H+G++Y+
Sbjct: 299 LINMKDENEELSAENTCLNSKMNLSQ--DARASSFVQKGLNNYSDVKGLNFNHEGSNYVS 356
Query: 1085 PSCGISSDNAEFGLTVGKASSTQILHPTLSNMSSKKQAVHVKDDKNNELFASQGTAYRSL 906
P+ G SS NA +G + S Q+ + S MS+K++A+ +KD++ +EL
Sbjct: 357 PTSGNSSSNAGYG-SNDDIRSIQLSTCSQSYMSNKRRAICIKDERKDEL----------- 404
Query: 905 MAIDGEVGRITHGVANGLSSMKQPFHVKDEKNNELFAPQGTGYRSSIDVDVVGRRP-SRI 729
VA G+ QP V DE N+ F+ G + + D R+ S
Sbjct: 405 -------------VAPGIC---QPNEVVDEAVNDRFS---LGVDARVFADKNSRQMLSCF 445
Query: 728 ADGLSRKKHMFHVKDAKNEEPFSAQGTAYRFRMDVDDVSGRKSSG 594
+S KK++F KD +NE+ + A ++ D++SGR SG
Sbjct: 446 PPFISSKKNLFDAKD-ENEDLYLASKRPRHCQVIGDELSGRSQSG 489
Score = 95.9 bits (237), Expect = 4e-17
Identities = 101/340 (29%), Positives = 148/340 (43%), Gaps = 11/340 (3%)
Frame = -1
Query: 989 SSKKQAVHVKDDKNNELFASQGTAYRSLMAIDGEVGRITHGVANGLSSMK--QPFHVKDE 816
SS++ +++KD+ NE +++ T S M + + R + V GL++ + + E
Sbjct: 294 SSEEMLINMKDE--NEELSAENTCLNSKMNLSQDA-RASSFVQKGLNNYSDVKGLNFNHE 350
Query: 815 KNNELFAPQGT-----GYRSSIDVDVVGRRPSRIADGLSRKKHMFHVKDAKNEEPFSAQG 651
+N + G GY S+ D+ + + + +S K+ +KD + +E A G
Sbjct: 351 GSNYVSPTSGNSSSNAGYGSNDDIRSI-QLSTCSQSYMSNKRRAICIKDERKDE-LVAPG 408
Query: 650 TAYRFRMDVDDVSGRKSSGVADGVFAD---RQXXXXXXXXXXXXSQVVE-NDEISDILTA 483
+ + V+ R S GV VFAD RQ + + DE D+ A
Sbjct: 409 ICQPNEVVDEAVNDRFSLGVDARVFADKNSRQMLSCFPPFISSKKNLFDAKDENEDLYLA 468
Query: 482 SNRAHHYLDEDETCTIISPVGNSHCQDVQASEQPCLQQSKSVRRQLVPTLEDRDSNLIQS 303
S R H C +I D S QS
Sbjct: 469 SKRPRH-------CQVIG---------------------------------DELSGRSQS 488
Query: 302 VSMGSQHSNVSHQAVQSNAWVQRSHVDDDSDICILEDLSEPARRNQSPVNGKSHIASQSS 123
G H RSH+DDD+DICILED+SEP R N S + GKS +++Q
Sbjct: 489 ---GGDH---------------RSHIDDDTDICILEDISEPVRSNSSLLLGKSLVSTQRY 530
Query: 122 SFIDSRSHFEVGGVRLKTNDERIIFHAALQDLSQPKSEAT 3
S DS + V G+R +TNDER+IF ALQDLSQPKSEA+
Sbjct: 531 S--DSLHNTGVVGMRNRTNDERLIFRVALQDLSQPKSEAS 568
>ref|XP_002521404.1| DNA repair helicase rad5,16, putative [Ricinus communis]
gi|223539303|gb|EEF40894.1| DNA repair helicase rad5,16,
putative [Ricinus communis]
Length = 1109
Score = 113 bits (283), Expect = 2e-22
Identities = 65/127 (51%), Positives = 87/127 (68%), Gaps = 1/127 (0%)
Frame = -1
Query: 380 CLQQSKSVRRQLVPTLEDRDSNLIQSVSMGSQH-SNVSHQAVQSNAWVQRSHVDDDSDIC 204
C ++S +V +Q ++ DS LI+ + +H S+VSH+++QSN +SH+DDDSDIC
Sbjct: 497 CAEKS-NVNKQSSCIKQEIDSKLIRPKCL--RHLSSVSHESIQSNLHGNKSHIDDDSDIC 553
Query: 203 ILEDLSEPARRNQSPVNGKSHIASQSSSFIDSRSHFEVGGVRLKTNDERIIFHAALQDLS 24
ILED+S+PAR +QS GK+HI Q S++ D + V R K NDER IF AALQDLS
Sbjct: 554 ILEDISQPARSHQSLAFGKAHIPLQHSAYGDFSHYTGVATARPKANDERFIFQAALQDLS 613
Query: 23 QPKSEAT 3
QPKSEAT
Sbjct: 614 QPKSEAT 620
>ref|XP_002305009.1| hypothetical protein POPTRDRAFT_647732 [Populus trichocarpa]
gi|222847973|gb|EEE85520.1| hypothetical protein
POPTRDRAFT_647732 [Populus trichocarpa]
Length = 359
Score = 87.8 bits (216), Expect = 1e-14
Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 7/243 (2%)
Frame = -1
Query: 740 PSRIADGLSRKKHMFHVKDAKNEEPFSAQGTAYRFRMDVDDVSGRK---SSGVADGVFAD 570
PS I G+S + + V+D K + + + ++ V + RK S G + V+ D
Sbjct: 119 PSDIQLGISEVQTVC-VEDEKTDGLVACRNMTWQSGEGVTEAVDRKCSWSDGNSTFVYKD 177
Query: 569 RQXXXXXXXXXXXXSQ--VVENDEISDILTASNRAHHYLDEDETCTIISPVGNSHCQDVQ 396
+Q + + ND+ + S+RA + E P + + ++
Sbjct: 178 KQQSPSGVLSSVQSQKHVIYTNDDRGGMALGSSRA-----QVEGIAGRFPFDSVYL-NLS 231
Query: 395 ASEQ--PCLQQSKSVRRQLVPTLEDRDSNLIQSVSMGSQHSNVSHQAVQSNAWVQRSHVD 222
ASEQ P S + QL +++ I S ++GS S VS +++QSN+ +SHVD
Sbjct: 232 ASEQYLPFAPTSHLSKMQLGCGKDEKQGLPIHSKALGSHLSIVSPESIQSNSSGSKSHVD 291
Query: 221 DDSDICILEDLSEPARRNQSPVNGKSHIASQSSSFIDSRSHFEVGGVRLKTNDERIIFHA 42
DD DICIL+D+S+PAR NQ K + Q ++ DS H V G R K NDE+++
Sbjct: 292 DDPDICILDDISQPARSNQCFAPSKPIVPLQHPTYNDSLHHSTVEGTRFKANDEQLVLRV 351
Query: 41 ALQ 33
ALQ
Sbjct: 352 ALQ 354