BLASTX nr result

ID: Panax21_contig00006146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006146
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262945.2| PREDICTED: preprotein translocase subunit se...   133   7e-29
emb|CBI24093.3| unnamed protein product [Vitis vinifera]              133   7e-29
gb|AFW56837.1| chloroplast SecY-1 [Zea mays]                          130   6e-28
ref|NP_001105505.2| preprotein translocase subunit SECY, chlorop...   130   6e-28
ref|XP_004169068.1| PREDICTED: preprotein translocase subunit SC...   129   8e-28

>ref|XP_002262945.2| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
           [Vitis vinifera]
          Length = 546

 Score =  133 bits (334), Expect = 7e-29
 Identities = 68/73 (93%), Positives = 71/73 (97%)
 Frame = -3

Query: 978 AAFIKMVLSRISVLGSAFLAVLAAGPVLIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 799
           AAFIKMVLSRISVLGS FLA+LAAGP L+EQTTHLTAFRGFAGTSVLILVGCATDTARKV
Sbjct: 465 AAFIKMVLSRISVLGSGFLAILAAGPSLVEQTTHLTAFRGFAGTSVLILVGCATDTARKV 524

Query: 798 QAEIISQKYKNID 760
           QAEIISQKYKNI+
Sbjct: 525 QAEIISQKYKNIE 537


>emb|CBI24093.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  133 bits (334), Expect = 7e-29
 Identities = 68/73 (93%), Positives = 71/73 (97%)
 Frame = -3

Query: 978 AAFIKMVLSRISVLGSAFLAVLAAGPVLIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 799
           AAFIKMVLSRISVLGS FLA+LAAGP L+EQTTHLTAFRGFAGTSVLILVGCATDTARKV
Sbjct: 496 AAFIKMVLSRISVLGSGFLAILAAGPSLVEQTTHLTAFRGFAGTSVLILVGCATDTARKV 555

Query: 798 QAEIISQKYKNID 760
           QAEIISQKYKNI+
Sbjct: 556 QAEIISQKYKNIE 568


>gb|AFW56837.1| chloroplast SecY-1 [Zea mays]
          Length = 553

 Score =  130 bits (326), Expect = 6e-28
 Identities = 67/73 (91%), Positives = 71/73 (97%)
 Frame = -3

Query: 978 AAFIKMVLSRISVLGSAFLAVLAAGPVLIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 799
           AA+IK VLSRISVLGSAFLAVLAAGP L+EQT+HLTAFRGFAGTSVLILVGCATDTARKV
Sbjct: 472 AAYIKTVLSRISVLGSAFLAVLAAGPSLVEQTSHLTAFRGFAGTSVLILVGCATDTARKV 531

Query: 798 QAEIISQKYKNID 760
           QAEIISQKYKNI+
Sbjct: 532 QAEIISQKYKNIE 544


>ref|NP_001105505.2| preprotein translocase subunit SECY, chloroplastic [Zea mays]
           gi|194701264|gb|ACF84716.1| unknown [Zea mays]
          Length = 553

 Score =  130 bits (326), Expect = 6e-28
 Identities = 67/73 (91%), Positives = 71/73 (97%)
 Frame = -3

Query: 978 AAFIKMVLSRISVLGSAFLAVLAAGPVLIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 799
           AA+IK VLSRISVLGSAFLAVLAAGP L+EQT+HLTAFRGFAGTSVLILVGCATDTARKV
Sbjct: 472 AAYIKTVLSRISVLGSAFLAVLAAGPSLVEQTSHLTAFRGFAGTSVLILVGCATDTARKV 531

Query: 798 QAEIISQKYKNID 760
           QAEIISQKYKNI+
Sbjct: 532 QAEIISQKYKNIE 544


>ref|XP_004169068.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
           [Cucumis sativus]
          Length = 546

 Score =  129 bits (325), Expect = 8e-28
 Identities = 66/81 (81%), Positives = 73/81 (90%)
 Frame = -3

Query: 978 AAFIKMVLSRISVLGSAFLAVLAAGPVLIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 799
           A+++K VLSRISVLGSAFLA+LAAGP +IEQTTHLTAFRGFAGTSVLILVGCATDTARKV
Sbjct: 465 ASYLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKV 524

Query: 798 QAEIISQKYKNIDSMTLKSIN 736
           QAEIISQKYKNI+   +   N
Sbjct: 525 QAEIISQKYKNIEFYDIDRYN 545


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