BLASTX nr result

ID: Panax21_contig00006136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006136
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527835.1| Auxin response factor, putative [Ricinus com...   227   7e-58
ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Gly...   226   1e-57
ref|XP_003592874.1| Auxin response factor [Medicago truncatula] ...   225   3e-57
gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin...   225   3e-57
ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vi...   224   7e-57

>ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
           gi|223532759|gb|EEF34538.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 671

 Score =  227 bits (579), Expect = 7e-58
 Identities = 118/169 (69%), Positives = 138/169 (81%), Gaps = 4/169 (2%)
 Frame = +1

Query: 1   SMYWSNQVEAGTESFTPV-SKDTCEKKQG--NGYRLFGIELLDHSMVEEISPVVV-SGAA 168
           S+Y  N+VE+ T+SF PV  KD+ E++QG  NGYRLFGI+L+ +S  EE SP++  SG  
Sbjct: 435 SLYRPNRVESVTDSFVPVIDKDSGERRQGSGNGYRLFGIQLVGNSNAEETSPLITTSGMV 494

Query: 169 AEDVLVPSLDAESDQHSEPSNVNRSDVPSVSCEPEKSCLITLQELHSRQIRSCTKVQMQG 348
            +D  V S DAESDQHSEPSN+NRS++PS+SCEPEKSCL + QEL SRQIRSCTKV MQG
Sbjct: 495 GDDRPVVSFDAESDQHSEPSNINRSEIPSISCEPEKSCLRSPQELQSRQIRSCTKVHMQG 554

Query: 349 IAVGRAVDLTRFNGYEDLLSKLEEMFEIEGELCGSAKKWQVVYTDDEDD 495
           IAVGRAVDLTRF  YEDLL KLEEMF+IEGEL G +KKWQVVYTDDEDD
Sbjct: 555 IAVGRAVDLTRFECYEDLLRKLEEMFDIEGELSGFSKKWQVVYTDDEDD 603


>ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 665

 Score =  226 bits (577), Expect = 1e-57
 Identities = 120/170 (70%), Positives = 141/170 (82%), Gaps = 5/170 (2%)
 Frame = +1

Query: 1   SMYWSNQVEAGTESFTPVS-KDTCEKKQG--NGYRLFGIELLDHSMVEEIS-PVV-VSGA 165
           S+YWS+++E  TESF+PV+ K+  EK+QG  NG RLFGI+L D+S   E S P+V +SG 
Sbjct: 430 SIYWSSRIENSTESFSPVAVKEFGEKRQGTANGCRLFGIQLHDNSNSNEESLPMVSLSGR 489

Query: 166 AAEDVLVPSLDAESDQHSEPSNVNRSDVPSVSCEPEKSCLITLQELHSRQIRSCTKVQMQ 345
             +D L+PSLDAESDQHSEPSNVNRSD PSVSC+ EKSCL + QE  SRQIRSCTKV MQ
Sbjct: 490 VGDDGLLPSLDAESDQHSEPSNVNRSDFPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQ 549

Query: 346 GIAVGRAVDLTRFNGYEDLLSKLEEMFEIEGELCGSAKKWQVVYTDDEDD 495
           G+AVGRAVDLTRF+GYEDLL KLEEMF+I GELCGS K+WQVVYTD+EDD
Sbjct: 550 GMAVGRAVDLTRFDGYEDLLRKLEEMFDINGELCGSTKEWQVVYTDNEDD 599


>ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
           gi|355481922|gb|AES63125.1| Auxin response factor
           [Medicago truncatula]
          Length = 671

 Score =  225 bits (574), Expect = 3e-57
 Identities = 115/169 (68%), Positives = 139/169 (82%), Gaps = 4/169 (2%)
 Frame = +1

Query: 1   SMYWSNQVEAGTESFTPVS-KDTCEKKQG--NGYRLFGIELLDHSMVEE-ISPVVVSGAA 168
           SMYWS+++E  TE F+PV+ +++ EK+QG  NG RLFGI+LL++S  EE +    +SG  
Sbjct: 437 SMYWSSRLENSTEPFSPVALEESGEKRQGTGNGCRLFGIQLLENSNAEESLQTAPLSGRV 496

Query: 169 AEDVLVPSLDAESDQHSEPSNVNRSDVPSVSCEPEKSCLITLQELHSRQIRSCTKVQMQG 348
            +D  VPSLD ESDQHSEPSNVNRSD+PSVSC+ +KSCL + QE  SRQIRSCTKV MQG
Sbjct: 497 GDDRSVPSLDVESDQHSEPSNVNRSDIPSVSCDADKSCLRSPQESQSRQIRSCTKVHMQG 556

Query: 349 IAVGRAVDLTRFNGYEDLLSKLEEMFEIEGELCGSAKKWQVVYTDDEDD 495
           +AVGRAVDLTRF+GYEDLL KLEEMF+IEGELCG+ KKW VVYTD+EDD
Sbjct: 557 MAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKKWLVVYTDNEDD 605


>gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
           [Medicago truncatula]
          Length = 670

 Score =  225 bits (574), Expect = 3e-57
 Identities = 115/169 (68%), Positives = 139/169 (82%), Gaps = 4/169 (2%)
 Frame = +1

Query: 1   SMYWSNQVEAGTESFTPVS-KDTCEKKQG--NGYRLFGIELLDHSMVEE-ISPVVVSGAA 168
           SMYWS+++E  TE F+PV+ +++ EK+QG  NG RLFGI+LL++S  EE +    +SG  
Sbjct: 436 SMYWSSRLENSTEPFSPVALEESGEKRQGTGNGCRLFGIQLLENSNAEESLQTAPLSGRV 495

Query: 169 AEDVLVPSLDAESDQHSEPSNVNRSDVPSVSCEPEKSCLITLQELHSRQIRSCTKVQMQG 348
            +D  VPSLD ESDQHSEPSNVNRSD+PSVSC+ +KSCL + QE  SRQIRSCTKV MQG
Sbjct: 496 GDDRSVPSLDVESDQHSEPSNVNRSDIPSVSCDADKSCLRSPQESQSRQIRSCTKVHMQG 555

Query: 349 IAVGRAVDLTRFNGYEDLLSKLEEMFEIEGELCGSAKKWQVVYTDDEDD 495
           +AVGRAVDLTRF+GYEDLL KLEEMF+IEGELCG+ KKW VVYTD+EDD
Sbjct: 556 MAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKKWLVVYTDNEDD 604


>ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
           gi|297739458|emb|CBI29640.3| unnamed protein product
           [Vitis vinifera]
          Length = 678

 Score =  224 bits (570), Expect = 7e-57
 Identities = 116/168 (69%), Positives = 135/168 (80%), Gaps = 3/168 (1%)
 Frame = +1

Query: 1   SMYWSNQVEAGTESFTP-VSKDTCEKKQ--GNGYRLFGIELLDHSMVEEISPVVVSGAAA 171
           SMYWSN++E  TESF P V+K++ EK++  G+G RLFG +LLD+S +EE  PV+  G   
Sbjct: 447 SMYWSNRMETATESFAPAVNKESGEKRRDTGSGCRLFGFQLLDNSTLEETLPVLTVG--- 503

Query: 172 EDVLVPSLDAESDQHSEPSNVNRSDVPSVSCEPEKSCLITLQELHSRQIRSCTKVQMQGI 351
           ED  VPSLD ESDQHSEPSN+NRSD+PSVSCEP+K  L + QE  SRQIRSCTKV MQGI
Sbjct: 504 EDQPVPSLDVESDQHSEPSNINRSDIPSVSCEPDKLSLRSPQESQSRQIRSCTKVHMQGI 563

Query: 352 AVGRAVDLTRFNGYEDLLSKLEEMFEIEGELCGSAKKWQVVYTDDEDD 495
           AVGRAVDLTRF+ YEDLL KLEEMF+I+GELCG    WQVVYTDDEDD
Sbjct: 564 AVGRAVDLTRFDRYEDLLKKLEEMFDIQGELCGLTSIWQVVYTDDEDD 611


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