BLASTX nr result

ID: Panax21_contig00006133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006133
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25124.3| unnamed protein product [Vitis vinifera]              177   2e-42
ref|XP_002275857.1| PREDICTED: dnaJ homolog subfamily C member 1...   177   2e-42
ref|XP_004163417.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog...   171   1e-40
ref|XP_004144862.1| PREDICTED: dnaJ homolog subfamily C member 1...   170   2e-40
ref|XP_002522773.1| Pre-mRNA-splicing factor cwc23, putative [Ri...   169   4e-40

>emb|CBI25124.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  177 bits (448), Expect = 2e-42
 Identities = 101/179 (56%), Positives = 122/179 (68%)
 Frame = -3

Query: 633 KDEKARKLFDDLLRFKREKLERQSQQNSKRRKMMSDLEERELAAFSPDPTTKARDEEEII 454
           KDEKARKLFDDLLR KRE+  RQ+Q + KRR+M+SDLEERE AA +PDP +KAR+EEE I
Sbjct: 119 KDEKARKLFDDLLRVKREQFHRQAQYDVKRRRMVSDLEERERAANAPDPASKAREEEERI 178

Query: 453 ARKLREEITRIRAMQXXXXXXXXXXXXXXXXXXXXTGIKESTFGGQGGLDKEKLLKVSWE 274
            +KL+EEI RIRAM                        KES   G GGL+KEK+LKVSWE
Sbjct: 179 TKKLKEEIARIRAMHANKGASGSRKEAPGTR-------KESVADGGGGLNKEKVLKVSWE 231

Query: 273 KVGEDYSAQRLRXXXXXXXXXXXXVIRSSNKKKGSAFIVMASKDAVVAATGSVCGDLSN 97
           K GEDY+A+ LR            V++SS +KKGSA +VMASK+A VAATG+VCG +SN
Sbjct: 232 KGGEDYTAEGLREVFAKFGEVEDVVLKSS-RKKGSALVVMASKEAAVAATGNVCGHISN 289


>ref|XP_002275857.1| PREDICTED: dnaJ homolog subfamily C member 17-like [Vitis vinifera]
          Length = 286

 Score =  177 bits (448), Expect = 2e-42
 Identities = 101/179 (56%), Positives = 122/179 (68%)
 Frame = -3

Query: 633 KDEKARKLFDDLLRFKREKLERQSQQNSKRRKMMSDLEERELAAFSPDPTTKARDEEEII 454
           KDEKARKLFDDLLR KRE+  RQ+Q + KRR+M+SDLEERE AA +PDP +KAR+EEE I
Sbjct: 64  KDEKARKLFDDLLRVKREQFHRQAQYDVKRRRMVSDLEERERAANAPDPASKAREEEERI 123

Query: 453 ARKLREEITRIRAMQXXXXXXXXXXXXXXXXXXXXTGIKESTFGGQGGLDKEKLLKVSWE 274
            +KL+EEI RIRAM                        KES   G GGL+KEK+LKVSWE
Sbjct: 124 TKKLKEEIARIRAMHANKGASGSRKEAPGTR-------KESVADGGGGLNKEKVLKVSWE 176

Query: 273 KVGEDYSAQRLRXXXXXXXXXXXXVIRSSNKKKGSAFIVMASKDAVVAATGSVCGDLSN 97
           K GEDY+A+ LR            V++SS +KKGSA +VMASK+A VAATG+VCG +SN
Sbjct: 177 KGGEDYTAEGLREVFAKFGEVEDVVLKSS-RKKGSALVVMASKEAAVAATGNVCGHISN 234


>ref|XP_004163417.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member
           17-like [Cucumis sativus]
          Length = 290

 Score =  171 bits (433), Expect = 1e-40
 Identities = 106/212 (50%), Positives = 132/212 (62%), Gaps = 1/212 (0%)
 Frame = -3

Query: 633 KDEKARKLFDDLLRFKREKLERQSQQNSKRRKMMSDLEERELAAFSPDPTTKARDEEEII 454
           KDEKARKLFDDLLR KRE+  RQS+++SKR+KMM+DLE RE +AF+PDP  K  +EEE I
Sbjct: 62  KDEKARKLFDDLLRVKREQHRRQSERDSKRQKMMTDLEARERSAFAPDPAAKELEEEEXI 121

Query: 453 ARKLREEITRIRAMQXXXXXXXXXXXXXXXXXXXXTGIKESTFGGQG-GLDKEKLLKVSW 277
           ARKL+EEI RIRAM                      G+ + + G  G  +DKE++LKVSW
Sbjct: 122 ARKLKEEIARIRAMH-----AKKGAPTTFPPKKETGGVGKKSDGDAGPTMDKERMLKVSW 176

Query: 276 EKVGEDYSAQRLRXXXXXXXXXXXXVIRSSNKKKGSAFIVMASKDAVVAATGSVCGDLSN 97
           EK+GEDY+A++LR            VIR  NKKKGSA IVM+SKDA VA+T +V GDLSN
Sbjct: 177 EKIGEDYTAEKLREMFSKFGEVEDVVIR-HNKKKGSAVIVMSSKDAAVASTRAVLGDLSN 235

Query: 96  XXXXXXXXXXXXXPFQSVQQPVESESPKLSNL 1
                        P  SV+ P    SP+ + L
Sbjct: 236 -----PLLVLPLQPVSSVEMPSAERSPEHNRL 262


>ref|XP_004144862.1| PREDICTED: dnaJ homolog subfamily C member 17-like [Cucumis
           sativus]
          Length = 290

 Score =  170 bits (431), Expect = 2e-40
 Identities = 106/212 (50%), Positives = 132/212 (62%), Gaps = 1/212 (0%)
 Frame = -3

Query: 633 KDEKARKLFDDLLRFKREKLERQSQQNSKRRKMMSDLEERELAAFSPDPTTKARDEEEII 454
           KDEKARKLFDDLLR KRE+  RQS+++SKR+KMM+DLE RE +AF+PDP  K  +EEE I
Sbjct: 62  KDEKARKLFDDLLRVKREQHRRQSERDSKRQKMMTDLEARERSAFAPDPAAKELEEEEKI 121

Query: 453 ARKLREEITRIRAMQXXXXXXXXXXXXXXXXXXXXTGIKESTFGGQG-GLDKEKLLKVSW 277
           ARKL+EEI RIRAM                      G+ + + G  G  +DKE++LKVSW
Sbjct: 122 ARKLKEEIARIRAMH-----AKKGAPTTFPPKKETGGVGKKSDGDAGPTMDKERMLKVSW 176

Query: 276 EKVGEDYSAQRLRXXXXXXXXXXXXVIRSSNKKKGSAFIVMASKDAVVAATGSVCGDLSN 97
           EK+GEDY+A++LR            VIR  NKKKGSA IVM+SKDA VA+T +V GDLSN
Sbjct: 177 EKIGEDYTAEKLREMFSKFGEVEDVVIR-HNKKKGSAVIVMSSKDAAVASTRAVLGDLSN 235

Query: 96  XXXXXXXXXXXXXPFQSVQQPVESESPKLSNL 1
                        P  SV+ P    SP+ + L
Sbjct: 236 -----PLLVLPLQPVSSVEMPSAERSPEHNRL 262


>ref|XP_002522773.1| Pre-mRNA-splicing factor cwc23, putative [Ricinus communis]
           gi|223538011|gb|EEF39624.1| Pre-mRNA-splicing factor
           cwc23, putative [Ricinus communis]
          Length = 289

 Score =  169 bits (428), Expect = 4e-40
 Identities = 104/211 (49%), Positives = 128/211 (60%)
 Frame = -3

Query: 633 KDEKARKLFDDLLRFKREKLERQSQQNSKRRKMMSDLEERELAAFSPDPTTKARDEEEII 454
           KDEKARKLFDDLLR KRE+     Q++SKR+KM+SDLE RE AAF+PDP  KAR+EE++I
Sbjct: 64  KDEKARKLFDDLLRVKRERYVHSFQRDSKRQKMVSDLEARERAAFAPDPVAKAREEEDMI 123

Query: 453 ARKLREEITRIRAMQXXXXXXXXXXXXXXXXXXXXTGIKESTFGGQGGLDKEKLLKVSWE 274
           ARKL+EEI RIRAM                       +  +        D+EK+LKVSWE
Sbjct: 124 ARKLKEEIERIRAMHANKGAHATSASKREAVGVARESVNNT--------DREKMLKVSWE 175

Query: 273 KVGEDYSAQRLRXXXXXXXXXXXXVIRSSNKKKGSAFIVMASKDAVVAATGSVCGDLSNX 94
           K GEDYSA+RL+            VI SS+KKK SA + MA+K+A VAATGSV GDL+N 
Sbjct: 176 KGGEDYSAERLKELFSKFGEVEDVVI-SSSKKKRSALVQMATKEAAVAATGSVSGDLNNP 234

Query: 93  XXXXXXXXXXXXPFQSVQQPVESESPKLSNL 1
                        F S QQ  +SES  ++NL
Sbjct: 235 LLVLPVKPAIATEFPSFQQ--QSESAHVNNL 263


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