BLASTX nr result

ID: Panax21_contig00006128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006128
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302974.1| predicted protein [Populus trichocarpa] gi|2...   162   1e-48
ref|XP_002275235.1| PREDICTED: probable ADP-ribosylation factor ...   165   4e-48
ref|XP_004145835.1| PREDICTED: probable ADP-ribosylation factor ...   163   6e-48
ref|XP_002534010.1| ARF GTPase activator, putative [Ricinus comm...   162   1e-47
ref|XP_002282569.1| PREDICTED: probable ADP-ribosylation factor ...   160   4e-47

>ref|XP_002302974.1| predicted protein [Populus trichocarpa] gi|222844700|gb|EEE82247.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  162 bits (411), Expect(2) = 1e-48
 Identities = 74/102 (72%), Positives = 91/102 (89%)
 Frame = -2

Query: 506 NLPVKLVVYDKDTFSLDDEMGEAEFDIKPLVEAVKMRLENLPSGTIITRVNASRENCLAE 327
           NLPV + VYDKDTFSLDD+MG+AEFDI+  +E VKM+L+NLP+GTII ++  SRENCLAE
Sbjct: 64  NLPVLIKVYDKDTFSLDDKMGDAEFDIRQFIEVVKMQLDNLPNGTIIRKIQPSRENCLAE 123

Query: 326 ESCIIWANNKVVQNMVLRLRNVECGEVELQLEWIDIPGAKGL 201
           ESCI+WA+ KV+QNM LRLR+VE GEVELQLEWIDIPG++G+
Sbjct: 124 ESCIVWASGKVIQNMFLRLRHVESGEVELQLEWIDIPGSRGM 165



 Score = 57.4 bits (137), Expect(2) = 1e-48
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -3

Query: 727 MEKLLGLLRIHVQKGVNLAIRDARSSDPYVIVRM 626
           ME LLGLLRIHV +G++LAIRD RSSDPYV+V+M
Sbjct: 1   MENLLGLLRIHVTRGIDLAIRDIRSSDPYVVVKM 34


>ref|XP_002275235.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11 [Vitis vinifera]
           gi|296087148|emb|CBI33522.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  165 bits (417), Expect(2) = 4e-48
 Identities = 78/102 (76%), Positives = 89/102 (87%)
 Frame = -2

Query: 506 NLPVKLVVYDKDTFSLDDEMGEAEFDIKPLVEAVKMRLENLPSGTIITRVNASRENCLAE 327
           NLPVK+ VYD+DTFSLDD+MG+AEF I P VEA++M L  LPSGTIITRV  +RENCLAE
Sbjct: 64  NLPVKIFVYDRDTFSLDDKMGDAEFQIGPFVEALRMELNGLPSGTIITRVQPNRENCLAE 123

Query: 326 ESCIIWANNKVVQNMVLRLRNVECGEVELQLEWIDIPGAKGL 201
           ESCIIW   KVVQN+VLRLRNVE GEVELQL+WIDIPG++GL
Sbjct: 124 ESCIIWTEGKVVQNLVLRLRNVESGEVELQLQWIDIPGSRGL 165



 Score = 53.5 bits (127), Expect(2) = 4e-48
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -3

Query: 727 MEKLLGLLRIHVQKGVNLAIRDARSSDPYVIVRM 626
           ME L GLLRIHV +GVNLA RD  SSDPYVIVRM
Sbjct: 1   MEHLHGLLRIHVHRGVNLAKRDVLSSDPYVIVRM 34


>ref|XP_004145835.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Cucumis sativus]
          Length = 165

 Score =  163 bits (413), Expect(2) = 6e-48
 Identities = 74/102 (72%), Positives = 90/102 (88%)
 Frame = -2

Query: 506 NLPVKLVVYDKDTFSLDDEMGEAEFDIKPLVEAVKMRLENLPSGTIITRVNASRENCLAE 327
           +LPV ++VYDKD FSLDD+MG+AEFD++P VEAVKMRL NLPSGTII ++  SRENCL+E
Sbjct: 64  SLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNLPSGTIIRKIQPSRENCLSE 123

Query: 326 ESCIIWANNKVVQNMVLRLRNVECGEVELQLEWIDIPGAKGL 201
           ESCIIW N +V+Q M LRLRNVE GE+ELQL+WIDIPG++GL
Sbjct: 124 ESCIIWVNGQVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL 165



 Score = 54.3 bits (129), Expect(2) = 6e-48
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = -3

Query: 727 MEKLLGLLRIHVQKGVNLAIRDARSSDPYVIVRM 626
           ME L+GLLRIHV +GVNLA+RD  SSDPYVI +M
Sbjct: 1   MENLMGLLRIHVFRGVNLAVRDVSSSDPYVIFKM 34


>ref|XP_002534010.1| ARF GTPase activator, putative [Ricinus communis]
           gi|223525988|gb|EEF28372.1| ARF GTPase activator,
           putative [Ricinus communis]
          Length = 169

 Score =  162 bits (410), Expect(2) = 1e-47
 Identities = 74/102 (72%), Positives = 90/102 (88%)
 Frame = -2

Query: 506 NLPVKLVVYDKDTFSLDDEMGEAEFDIKPLVEAVKMRLENLPSGTIITRVNASRENCLAE 327
           NLPVK+ VYD+DTFS DD+MG+AEFDI P +EA+KM L+ LPSGTIITR+  SRENCLAE
Sbjct: 68  NLPVKIGVYDRDTFSRDDKMGDAEFDIHPFLEALKMHLQGLPSGTIITRIQPSRENCLAE 127

Query: 326 ESCIIWANNKVVQNMVLRLRNVECGEVELQLEWIDIPGAKGL 201
           ES ++W + KVVQN+ LRLRNVECGE+ELQL+WIDIPG++GL
Sbjct: 128 ESHVLWVDGKVVQNLFLRLRNVECGEIELQLQWIDIPGSRGL 169



 Score = 54.7 bits (130), Expect(2) = 1e-47
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = -3

Query: 736 SNKMEKLLGLLRIHVQKGVNLAIRDARSSDPYVIVRM 626
           S+ +E L+GLLRIHV +GVNLAIRD  +SDPY++V++
Sbjct: 2   SSNIESLMGLLRIHVHRGVNLAIRDVLTSDPYIVVKL 38


>ref|XP_002282569.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Vitis vinifera]
          Length = 181

 Score =  160 bits (405), Expect(2) = 4e-47
 Identities = 73/102 (71%), Positives = 89/102 (87%)
 Frame = -2

Query: 506 NLPVKLVVYDKDTFSLDDEMGEAEFDIKPLVEAVKMRLENLPSGTIITRVNASRENCLAE 327
           NLP+KL VYD DTFS DD+MG+AEF I P +EA++M LE LPSGTII+RV  SR+NCLAE
Sbjct: 80  NLPIKLTVYDHDTFSKDDKMGDAEFTINPYLEALRMHLEGLPSGTIISRVQPSRQNCLAE 139

Query: 326 ESCIIWANNKVVQNMVLRLRNVECGEVELQLEWIDIPGAKGL 201
           ESCI+W + +VVQ++ LRLRNVECGEVELQL+WID+PG+KGL
Sbjct: 140 ESCIVWTDGRVVQDICLRLRNVECGEVELQLQWIDLPGSKGL 181



 Score = 54.7 bits (130), Expect(2) = 4e-47
 Identities = 22/34 (64%), Positives = 30/34 (88%)
 Frame = -3

Query: 727 MEKLLGLLRIHVQKGVNLAIRDARSSDPYVIVRM 626
           ME LLGLLR+ V++G+NLA+RD RSSDPY +++M
Sbjct: 17  MENLLGLLRVRVKRGINLAVRDVRSSDPYAVIKM 50


Top