BLASTX nr result
ID: Panax21_contig00006122
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00006122
(658 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi... 326 2e-87
gb|AAS80150.1| ACT11D09.4 [Cucumis melo] 323 1e-86
emb|CBI29649.3| unnamed protein product [Vitis vinifera] 311 5e-83
ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containi... 311 5e-83
emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera] 311 5e-83
>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 871
Score = 326 bits (836), Expect = 2e-87
Identities = 161/219 (73%), Positives = 184/219 (84%)
Frame = -1
Query: 658 PLHALXXXXXXXXXXXPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDNASVLARQSV 479
PLHAL PNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLD AS +AR SV
Sbjct: 50 PLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSV 109
Query: 478 FSNTRPTVFTCNAIMASMHRAKRYEDSVALFNYFFNQSNIIPNVVSYNVLMNAHCDMGNV 299
FSNTRPTVFTCNAI+A+M+RAKRY D++ALF +FFNQSNI+PNVVSYN L+NAHCD G V
Sbjct: 110 FSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRV 169
Query: 298 HIALNVYRHVIDNAPFSPSSVSYRHLTKGLIDAGRIDEAMDLLREMIHRGHGADSLVYXX 119
+ L VYRH+I NAPFSPS+V+YRHLTKGLIDAGRI+EA+DLLREM+++GHGADSLV+
Sbjct: 170 DVGLEVYRHIIANAPFSPSAVTYRHLTKGLIDAGRIEEAVDLLREMLNKGHGADSLVFNN 229
Query: 118 XXXXXXXXXXLEKANEIFDELKEKCLVYDGVVSATFLDW 2
LEKANE+FDELKE+CLVYDGVV+ATF+DW
Sbjct: 230 LISGFLNLGNLEKANELFDELKERCLVYDGVVNATFMDW 268
>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
Length = 896
Score = 323 bits (829), Expect = 1e-86
Identities = 160/219 (73%), Positives = 183/219 (83%)
Frame = -1
Query: 658 PLHALXXXXXXXXXXXPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDNASVLARQSV 479
PLHAL PNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLD AS +AR SV
Sbjct: 76 PLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSV 135
Query: 478 FSNTRPTVFTCNAIMASMHRAKRYEDSVALFNYFFNQSNIIPNVVSYNVLMNAHCDMGNV 299
FSNTRPTVFTCNAI+A+M+RAKRY D++ALF +FFNQSNI+PNVVSYN L+NAHCD G V
Sbjct: 136 FSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRV 195
Query: 298 HIALNVYRHVIDNAPFSPSSVSYRHLTKGLIDAGRIDEAMDLLREMIHRGHGADSLVYXX 119
+ L VYRH+I NAPFSPS+V+YRHLTKGLIDAGRI+EA+DLLREM+++GHGADSLV+
Sbjct: 196 DVGLEVYRHIIANAPFSPSAVTYRHLTKGLIDAGRIEEAVDLLREMLNKGHGADSLVFNN 255
Query: 118 XXXXXXXXXXLEKANEIFDELKEKCLVYDGVVSATFLDW 2
L KANE+FDELKE+CLVYDGVV+ATF+DW
Sbjct: 256 LISGFLNLGNLVKANELFDELKERCLVYDGVVNATFMDW 294
>emb|CBI29649.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 311 bits (798), Expect = 5e-83
Identities = 152/220 (69%), Positives = 178/220 (80%), Gaps = 1/220 (0%)
Frame = -1
Query: 658 PLHALXXXXXXXXXXXP-NAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDNASVLARQS 482
PLHAL NAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLD AS ARQS
Sbjct: 67 PLHALRRDPSAPRPRPDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDLASATARQS 126
Query: 481 VFSNTRPTVFTCNAIMASMHRAKRYEDSVALFNYFFNQSNIIPNVVSYNVLMNAHCDMGN 302
VFSNTRPTVFTCNAI+A+M+R KR++D++ALF +FFNQSNI+PN+VSYNVL+N HCD G
Sbjct: 127 VFSNTRPTVFTCNAIIAAMYRNKRFDDAIALFQFFFNQSNIVPNIVSYNVLINTHCDAGR 186
Query: 301 VHIALNVYRHVIDNAPFSPSSVSYRHLTKGLIDAGRIDEAMDLLREMIHRGHGADSLVYX 122
V + L++YRH++ NAPFSPS V+YRHLTKGLID+GRI EA+DLLREM+++GHGADSLVY
Sbjct: 187 VDVGLDIYRHILANAPFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLVYN 246
Query: 121 XXXXXXXXXXXLEKANEIFDELKEKCLVYDGVVSATFLDW 2
KA E+FDELKE+CLVYDGVV+ TF+DW
Sbjct: 247 NLISGFLNLENEAKAIELFDELKERCLVYDGVVNGTFMDW 286
>ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Vitis vinifera]
Length = 627
Score = 311 bits (798), Expect = 5e-83
Identities = 152/220 (69%), Positives = 178/220 (80%), Gaps = 1/220 (0%)
Frame = -1
Query: 658 PLHALXXXXXXXXXXXP-NAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDNASVLARQS 482
PLHAL NAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLD AS ARQS
Sbjct: 67 PLHALRRDPSAPRPRPDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDLASATARQS 126
Query: 481 VFSNTRPTVFTCNAIMASMHRAKRYEDSVALFNYFFNQSNIIPNVVSYNVLMNAHCDMGN 302
VFSNTRPTVFTCNAI+A+M+R KR++D++ALF +FFNQSNI+PN+VSYNVL+N HCD G
Sbjct: 127 VFSNTRPTVFTCNAIIAAMYRNKRFDDAIALFQFFFNQSNIVPNIVSYNVLINTHCDAGR 186
Query: 301 VHIALNVYRHVIDNAPFSPSSVSYRHLTKGLIDAGRIDEAMDLLREMIHRGHGADSLVYX 122
V + L++YRH++ NAPFSPS V+YRHLTKGLID+GRI EA+DLLREM+++GHGADSLVY
Sbjct: 187 VDVGLDIYRHILANAPFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLVYN 246
Query: 121 XXXXXXXXXXXLEKANEIFDELKEKCLVYDGVVSATFLDW 2
KA E+FDELKE+CLVYDGVV+ TF+DW
Sbjct: 247 NLISGFLNLENEAKAIELFDELKERCLVYDGVVNGTFMDW 286
>emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]
Length = 627
Score = 311 bits (798), Expect = 5e-83
Identities = 152/220 (69%), Positives = 178/220 (80%), Gaps = 1/220 (0%)
Frame = -1
Query: 658 PLHALXXXXXXXXXXXP-NAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDNASVLARQS 482
PLHAL NAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLD AS ARQS
Sbjct: 67 PLHALRRDPSAPRPRPDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDLASATARQS 126
Query: 481 VFSNTRPTVFTCNAIMASMHRAKRYEDSVALFNYFFNQSNIIPNVVSYNVLMNAHCDMGN 302
VFSNTRPTVFTCNAI+A+M+R KR++D++ALF +FFNQSNI+PN+VSYNVL+N HCD G
Sbjct: 127 VFSNTRPTVFTCNAIIAAMYRNKRFDDAIALFQFFFNQSNIVPNIVSYNVLINTHCDAGR 186
Query: 301 VHIALNVYRHVIDNAPFSPSSVSYRHLTKGLIDAGRIDEAMDLLREMIHRGHGADSLVYX 122
V + L++YRH++ NAPFSPS V+YRHLTKGLID+GRI EA+DLLREM+++GHGADSLVY
Sbjct: 187 VDVGLDIYRHILANAPFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLVYN 246
Query: 121 XXXXXXXXXXXLEKANEIFDELKEKCLVYDGVVSATFLDW 2
KA E+FDELKE+CLVYDGVV+ TF+DW
Sbjct: 247 NLISGFLNLENEAKAIELFDELKERCLVYDGVVNGTFMDW 286