BLASTX nr result

ID: Panax21_contig00006118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006118
         (1208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245...   372   e-100
ref|XP_002317806.1| predicted protein [Populus trichocarpa] gi|2...   365   1e-98
ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...   360   5e-97
ref|XP_003523323.1| PREDICTED: uncharacterized protein LOC100787...   357   3e-96
emb|CAN62612.1| hypothetical protein VITISV_033249 [Vitis vinifera]   357   3e-96

>ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
           gi|302143972|emb|CBI23077.3| unnamed protein product
           [Vitis vinifera]
          Length = 361

 Score =  372 bits (955), Expect = e-100
 Identities = 191/238 (80%), Positives = 208/238 (87%)
 Frame = +3

Query: 222 EMRDLEEMLSKLNPMAEEFVPPSLANYRPLLQHSATGVPHFGYITDNNYVMNTNSPVANG 401
           ++RDLE++LSKLNPMAEEFVPPSLAN      H  +    FGY   NN+V+  N   ANG
Sbjct: 93  DIRDLEDLLSKLNPMAEEFVPPSLAN-----GHGWSAGAAFGYT--NNFVLQANFGNANG 145

Query: 402 NSTRRKKISYSNAKRRMNSRTSMAQREDVIRRTVYVSDIDHQVTEEQLAVLFIGCGQVVD 581
           N+ RRK+ +Y N KRR+NSRTSMAQRE+VI+RTVYVSDID QVTEE LA LFI CGQVVD
Sbjct: 146 NAGRRKRNNY-NQKRRINSRTSMAQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVVD 204

Query: 582 CRVCGDPNSVLRFAFIEFTDEEGARNALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 761
           CR+CGDPNSVLRFAF+EFTDEEGAR ALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPRS
Sbjct: 205 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRS 264

Query: 762 EDEREMCARTIYCTNIDKKVTQADVKLFFESICGEVLRLRLLGDYHHSTRIAFVEFVM 935
           EDEREMCARTIYCTNIDKKVTQA+VKLFFESICGEV RLRLLGDYHHSTRIAFVEFVM
Sbjct: 265 EDEREMCARTIYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVM 322



 Score = 67.0 bits (162), Expect = 9e-09
 Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +3

Query: 483 DVIRRTVYVSDIDHQVTEEQLAVLFIG-CGQVVDCRVCGDPNSVLRFAFIEFTDEEGARN 659
           ++  RT+Y ++ID +VT+ ++ + F   CG+V   R+ GD +   R AF+EF   E A  
Sbjct: 269 EMCARTIYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESAIA 328

Query: 660 ALSLAGTMLGFYPVRVLPSKTAIAPVNP 743
           AL+ +G +LG  P+RV PSKT + P  P
Sbjct: 329 ALNCSGAILGSLPIRVSPSKTPVRPRAP 356


>ref|XP_002317806.1| predicted protein [Populus trichocarpa] gi|222858479|gb|EEE96026.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  365 bits (937), Expect = 1e-98
 Identities = 180/238 (75%), Positives = 206/238 (86%)
 Frame = +3

Query: 222 EMRDLEEMLSKLNPMAEEFVPPSLANYRPLLQHSATGVPHFGYITDNNYVMNTNSPVANG 401
           +M DL EMLSKLNPMAEEFVPPSLAN+     +       FG+   NN+++  N+ +ANG
Sbjct: 24  DMNDLVEMLSKLNPMAEEFVPPSLANHPGFFGNG------FGF-NANNFLVQINNGIANG 76

Query: 402 NSTRRKKISYSNAKRRMNSRTSMAQREDVIRRTVYVSDIDHQVTEEQLAVLFIGCGQVVD 581
            + RRKK SY+  +RRMN+RTSMAQR+++I+RTVYVSDID QVTEEQLA LFI CGQVVD
Sbjct: 77  QTNRRKKNSYNQGRRRMNNRTSMAQRDEIIKRTVYVSDIDQQVTEEQLAGLFIHCGQVVD 136

Query: 582 CRVCGDPNSVLRFAFIEFTDEEGARNALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 761
           CR+CGDPNSVLRFAF+EFTDEEGAR ALSL+GT+LGFYP+RVLPSKTAIAPVNPTFLPRS
Sbjct: 137 CRICGDPNSVLRFAFVEFTDEEGARTALSLSGTVLGFYPLRVLPSKTAIAPVNPTFLPRS 196

Query: 762 EDEREMCARTIYCTNIDKKVTQADVKLFFESICGEVLRLRLLGDYHHSTRIAFVEFVM 935
           EDEREMCART+YCTNIDKK+TQADV+LFFES CGEV RLRLLGDYHHSTRIAFVEF +
Sbjct: 197 EDEREMCARTVYCTNIDKKITQADVRLFFESFCGEVHRLRLLGDYHHSTRIAFVEFAV 254



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +3

Query: 483 DVIRRTVYVSDIDHQVTEEQLAVLFIG-CGQVVDCRVCGDPNSVLRFAFIEFTDEEGARN 659
           ++  RTVY ++ID ++T+  + + F   CG+V   R+ GD +   R AF+EF   E A  
Sbjct: 201 EMCARTVYCTNIDKKITQADVRLFFESFCGEVHRLRLLGDYHHSTRIAFVEFAVAESAIA 260

Query: 660 ALSLAGTMLGFYPVRVLPSKTAIAPVNP 743
           AL+ +G +LG  P+RV PSKT + P  P
Sbjct: 261 ALNCSGAVLGSLPIRVSPSKTPVRPRLP 288


>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
           gi|223541913|gb|EEF43459.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 379

 Score =  360 bits (923), Expect = 5e-97
 Identities = 185/248 (74%), Positives = 210/248 (84%), Gaps = 8/248 (3%)
 Frame = +3

Query: 216 KQEMRDLEEMLSKLNPMAEEFVPPSLANYRPLLQ--HSATGVPHFGYITDNNY---VMNT 380
           ++++R+L+E+ SKLNPMAEEFVPPSLAN +      H   G+    Y  +NNY    M T
Sbjct: 94  QRDIRELQELFSKLNPMAEEFVPPSLANNKISNNYIHGLNGLNVGFYTNNNNYDPAFMLT 153

Query: 381 NSP---VANGNSTRRKKISYSNAKRRMNSRTSMAQREDVIRRTVYVSDIDHQVTEEQLAV 551
           N+      NG++ RRKK +Y+  KRR+NSRTSMAQRE++IRRTVYVSDID QVTEEQLA 
Sbjct: 154 NASRNGQLNGSAARRKK-NYNQGKRRLNSRTSMAQREEIIRRTVYVSDIDQQVTEEQLAA 212

Query: 552 LFIGCGQVVDCRVCGDPNSVLRFAFIEFTDEEGARNALSLAGTMLGFYPVRVLPSKTAIA 731
           LF+GCGQVVDCR+CGDPNSVLRFAFIEFT EEGAR AL+LAGT+LG+YPVRVLPSKTAIA
Sbjct: 213 LFVGCGQVVDCRICGDPNSVLRFAFIEFTHEEGARAALNLAGTVLGYYPVRVLPSKTAIA 272

Query: 732 PVNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVKLFFESICGEVLRLRLLGDYHHSTR 911
           PVNPTFLPRS+DEREMC RTIYCTNIDKKVTQADVKLFFES+CGEV RLRLLGDYHHSTR
Sbjct: 273 PVNPTFLPRSDDEREMCIRTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR 332

Query: 912 IAFVEFVM 935
           IAFVEFVM
Sbjct: 333 IAFVEFVM 340



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = +3

Query: 495 RTVYVSDIDHQVTEEQLAVLFIG-CGQVVDCRVCGDPNSVLRFAFIEFTDEEGARNALSL 671
           RT+Y ++ID +VT+  + + F   CG+V   R+ GD +   R AF+EF   E A  AL+ 
Sbjct: 291 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 350

Query: 672 AGTMLGFYPVRVLPSKTAIAPVNP 743
           +G +LG  P+RV PSKT + P  P
Sbjct: 351 SGVVLGSLPIRVSPSKTPVRPRAP 374


>ref|XP_003523323.1| PREDICTED: uncharacterized protein LOC100787572 [Glycine max]
          Length = 369

 Score =  357 bits (916), Expect = 3e-96
 Identities = 179/242 (73%), Positives = 203/242 (83%), Gaps = 1/242 (0%)
 Frame = +3

Query: 213 FKQEMRDLEEMLSKLNPMAEEFVPPSLANYRPLLQHSATGVPHFGYITDNNYVMNTNSPV 392
           FK++MRDLEE+LSKLNPMAEEFVPPSLAN      H     P+ G+   NN ++ TN   
Sbjct: 94  FKRDMRDLEELLSKLNPMAEEFVPPSLAN-----THGFLAGPNAGFGYTNNIILPTNYGN 148

Query: 393 ANGNST-RRKKISYSNAKRRMNSRTSMAQREDVIRRTVYVSDIDHQVTEEQLAVLFIGCG 569
            NG +  RR+K  Y+  KRRMN++  M +RE++IRRTVYVSDID  VTEEQLA LF+ CG
Sbjct: 149 TNGQTNNRRRKNGYNPGKRRMNNKMDMEKREEMIRRTVYVSDIDQLVTEEQLAALFLNCG 208

Query: 570 QVVDCRVCGDPNSVLRFAFIEFTDEEGARNALSLAGTMLGFYPVRVLPSKTAIAPVNPTF 749
           QVVDCRVCGDPNS+LRFAF+EFTDEEGAR ALSL+GTMLG+YP+RVLPSKTAIAPVNPTF
Sbjct: 209 QVVDCRVCGDPNSILRFAFVEFTDEEGARAALSLSGTMLGYYPLRVLPSKTAIAPVNPTF 268

Query: 750 LPRSEDEREMCARTIYCTNIDKKVTQADVKLFFESICGEVLRLRLLGDYHHSTRIAFVEF 929
           LPRSEDEREMC+RTIYCTNIDKK+TQADVK FFESICGEV RLRLLGDYHHSTRIAFVEF
Sbjct: 269 LPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEF 328

Query: 930 VM 935
            +
Sbjct: 329 AL 330



 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
 Frame = +3

Query: 483 DVIRRTVYVSDIDHQVTEEQLAVLFIG-CGQVVDCRVCGDPNSVLRFAFIEFTDEEGARN 659
           ++  RT+Y ++ID ++T+  +   F   CG+V   R+ GD +   R AF+EF   E A  
Sbjct: 277 EMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIA 336

Query: 660 ALSLAGTMLGFYPVRVLPSKTAIAPVNP 743
           ALS +G +LG  P+RV PSKT + P  P
Sbjct: 337 ALSCSGVILGSLPIRVSPSKTPVRPRAP 364


>emb|CAN62612.1| hypothetical protein VITISV_033249 [Vitis vinifera]
          Length = 369

 Score =  357 bits (916), Expect = 3e-96
 Identities = 182/239 (76%), Positives = 201/239 (84%)
 Frame = +3

Query: 222 EMRDLEEMLSKLNPMAEEFVPPSLANYRPLLQHSATGVPHFGYITDNNYVMNTNSPVANG 401
           +MR+L+E+ SKLNPMAEEFVPPSLAN          G+    Y   +    NT +   NG
Sbjct: 134 DMRELQELFSKLNPMAEEFVPPSLAN---------NGLNGGFYSNGSETHNNTRNGQVNG 184

Query: 402 NSTRRKKISYSNAKRRMNSRTSMAQREDVIRRTVYVSDIDHQVTEEQLAVLFIGCGQVVD 581
              RRKK ++   KRRMNSRTSMAQRE++IRRTVYVSDID QVTEE+LA LFI CGQVVD
Sbjct: 185 ---RRKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVD 241

Query: 582 CRVCGDPNSVLRFAFIEFTDEEGARNALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 761
           CRVCGDPNSVLRFAF+EFTDEEGAR ALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+
Sbjct: 242 CRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRN 301

Query: 762 EDEREMCARTIYCTNIDKKVTQADVKLFFESICGEVLRLRLLGDYHHSTRIAFVEFVMV 938
           EDEREMCARTIYCTNIDKKV+QADVKLFFES+CGEV RLRLLGDYHHSTRIAFVEF+M+
Sbjct: 302 EDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMI 360


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