BLASTX nr result

ID: Panax21_contig00006103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006103
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris] gi|169977...    77   9e-16
gb|AFK80345.1| chromomethylase 3 [Nicotiana benthamiana]               77   9e-16
dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum]       77   1e-15
ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferas...    77   4e-14
gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]                  73   8e-14

>emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris] gi|169977314|emb|CAQ18904.1|
           chromomethylase [Nicotiana sylvestris]
           gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana
           sylvestris] gi|169977318|emb|CAQ18906.1| chromomethylase
           [Nicotiana sylvestris]
          Length = 741

 Score = 77.4 bits (189), Expect(2) = 9e-16
 Identities = 44/94 (46%), Positives = 57/94 (60%)
 Frame = +1

Query: 1   VDLDTKLVALSDADYYYDMIYNVPFSSFLNSQHDNVGDGNESDSTISSETNVPQXXXXXX 180
           V L  K    S++DYYYDM+Y +P+SSF++   D     +ESDSTISS+++         
Sbjct: 115 VRLPLKESLRSNSDYYYDMMYLLPYSSFVSLPQDVSSPISESDSTISSDSDT---VDVKE 171

Query: 181 XXXXXXXXXXYSGCGAMSTGLCLGANMSGVHLVT 282
                     YSGCGAMSTGLCLGA++ GV LVT
Sbjct: 172 QKLEKNLLDLYSGCGAMSTGLCLGADIGGVKLVT 205



 Score = 30.8 bits (68), Expect(2) = 9e-16
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 399 KWAVDINQYTCQSTKSGNTIQRACQTAQAD 488
           KWAVD+NQY C S K  N  + A +   AD
Sbjct: 206 KWAVDLNQYACDSLK-WNHPETAVRNESAD 234


>gb|AFK80345.1| chromomethylase 3 [Nicotiana benthamiana]
          Length = 740

 Score = 77.4 bits (189), Expect(2) = 9e-16
 Identities = 44/94 (46%), Positives = 57/94 (60%)
 Frame = +1

Query: 1   VDLDTKLVALSDADYYYDMIYNVPFSSFLNSQHDNVGDGNESDSTISSETNVPQXXXXXX 180
           V L  K    S++DYYYDM+Y +P+SSF++   D     +ESDSTISS+++         
Sbjct: 115 VRLPLKESLKSNSDYYYDMMYLLPYSSFVSLPQDVSSPISESDSTISSDSDT---VDVKE 171

Query: 181 XXXXXXXXXXYSGCGAMSTGLCLGANMSGVHLVT 282
                     YSGCGAMSTGLCLGA++ GV LVT
Sbjct: 172 QKLEMNLLDLYSGCGAMSTGLCLGADIGGVKLVT 205



 Score = 30.8 bits (68), Expect(2) = 9e-16
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 399 KWAVDINQYTCQSTKSGNTIQRACQTAQAD 488
           KWAVD+NQY C S K  N  + A +   AD
Sbjct: 206 KWAVDLNQYACDSLK-WNHPETAVRNESAD 234


>dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum]
          Length = 741

 Score = 77.0 bits (188), Expect(2) = 1e-15
 Identities = 41/84 (48%), Positives = 54/84 (64%)
 Frame = +1

Query: 31  SDADYYYDMIYNVPFSSFLNSQHDNVGDGNESDSTISSETNVPQXXXXXXXXXXXXXXXX 210
           S++DYYYDM+Y +P+SSF++   D     +ESDSTISS+++                   
Sbjct: 125 SNSDYYYDMMYLLPYSSFVSLPQDVSSPISESDSTISSDSDT---VDVKEQKLEKNLLDL 181

Query: 211 YSGCGAMSTGLCLGANMSGVHLVT 282
           YSGCGAMSTGLCLGA++ GV LVT
Sbjct: 182 YSGCGAMSTGLCLGADIGGVKLVT 205



 Score = 30.8 bits (68), Expect(2) = 1e-15
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 399 KWAVDINQYTCQSTKSGNTIQRACQTAQAD 488
           KWAVD+NQY C S K  N  + A +   AD
Sbjct: 206 KWAVDLNQYACDSLK-WNHPETAVRNESAD 234


>ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Glycine
           max]
          Length = 868

 Score = 76.6 bits (187), Expect(2) = 4e-14
 Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
 Frame = +1

Query: 1   VDLDTKLVALSDADYYYDMIYNVPFSSFLNSQHDNVGDGNESDSTISSETN--------- 153
           VDL+ K   +   DYY D  Y +P+S+F+N   +N   G+E+ STISSETN         
Sbjct: 220 VDLEAKKETIPPCDYYCDTQYLLPYSTFVNLPSENGESGSETSSTISSETNGIGKYEVNS 279

Query: 154 --VPQXXXXXXXXXXXXXXXXYSGCGAMSTGLCLGANMSGVHLVT 282
                                Y GCGAMSTGLCLG N+SGV+LVT
Sbjct: 280 QPKEAFLPEESKDPEMKLLDLYCGCGAMSTGLCLGGNLSGVNLVT 324



 Score = 26.2 bits (56), Expect(2) = 4e-14
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 399 KWAVDINQYTCQSTK 443
           +WAVD+NQ+ C+  K
Sbjct: 325 RWAVDLNQHACECLK 339


>gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]
          Length = 824

 Score = 72.8 bits (177), Expect(2) = 8e-14
 Identities = 38/94 (40%), Positives = 51/94 (54%)
 Frame = +1

Query: 1   VDLDTKLVALSDADYYYDMIYNVPFSSFLNSQHDNVGDGNESDSTISSETNVPQXXXXXX 180
           VDL+ K   +   DYY DM+Y + +SSF N   +   + +E  S+  S+ +         
Sbjct: 184 VDLEAKNKEIPSCDYYCDMLYKLEYSSFTNLPPEGKTNASEEASSTISDDSPDTVNGANS 243

Query: 181 XXXXXXXXXXYSGCGAMSTGLCLGANMSGVHLVT 282
                     YSGCGAMSTGLCLGANM+G+ LVT
Sbjct: 244 GSEDASLLDLYSGCGAMSTGLCLGANMAGLRLVT 277



 Score = 28.9 bits (63), Expect(2) = 8e-14
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +3

Query: 399 KWAVDINQYTCQS 437
           KWAVDIN+Y C+S
Sbjct: 278 KWAVDINKYACES 290


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