BLASTX nr result
ID: Panax21_contig00006103
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00006103 (535 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris] gi|169977... 77 9e-16 gb|AFK80345.1| chromomethylase 3 [Nicotiana benthamiana] 77 9e-16 dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum] 77 1e-15 ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferas... 77 4e-14 gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum] 73 8e-14 >emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris] gi|169977314|emb|CAQ18904.1| chromomethylase [Nicotiana sylvestris] gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana sylvestris] gi|169977318|emb|CAQ18906.1| chromomethylase [Nicotiana sylvestris] Length = 741 Score = 77.4 bits (189), Expect(2) = 9e-16 Identities = 44/94 (46%), Positives = 57/94 (60%) Frame = +1 Query: 1 VDLDTKLVALSDADYYYDMIYNVPFSSFLNSQHDNVGDGNESDSTISSETNVPQXXXXXX 180 V L K S++DYYYDM+Y +P+SSF++ D +ESDSTISS+++ Sbjct: 115 VRLPLKESLRSNSDYYYDMMYLLPYSSFVSLPQDVSSPISESDSTISSDSDT---VDVKE 171 Query: 181 XXXXXXXXXXYSGCGAMSTGLCLGANMSGVHLVT 282 YSGCGAMSTGLCLGA++ GV LVT Sbjct: 172 QKLEKNLLDLYSGCGAMSTGLCLGADIGGVKLVT 205 Score = 30.8 bits (68), Expect(2) = 9e-16 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = +3 Query: 399 KWAVDINQYTCQSTKSGNTIQRACQTAQAD 488 KWAVD+NQY C S K N + A + AD Sbjct: 206 KWAVDLNQYACDSLK-WNHPETAVRNESAD 234 >gb|AFK80345.1| chromomethylase 3 [Nicotiana benthamiana] Length = 740 Score = 77.4 bits (189), Expect(2) = 9e-16 Identities = 44/94 (46%), Positives = 57/94 (60%) Frame = +1 Query: 1 VDLDTKLVALSDADYYYDMIYNVPFSSFLNSQHDNVGDGNESDSTISSETNVPQXXXXXX 180 V L K S++DYYYDM+Y +P+SSF++ D +ESDSTISS+++ Sbjct: 115 VRLPLKESLKSNSDYYYDMMYLLPYSSFVSLPQDVSSPISESDSTISSDSDT---VDVKE 171 Query: 181 XXXXXXXXXXYSGCGAMSTGLCLGANMSGVHLVT 282 YSGCGAMSTGLCLGA++ GV LVT Sbjct: 172 QKLEMNLLDLYSGCGAMSTGLCLGADIGGVKLVT 205 Score = 30.8 bits (68), Expect(2) = 9e-16 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = +3 Query: 399 KWAVDINQYTCQSTKSGNTIQRACQTAQAD 488 KWAVD+NQY C S K N + A + AD Sbjct: 206 KWAVDLNQYACDSLK-WNHPETAVRNESAD 234 >dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum] Length = 741 Score = 77.0 bits (188), Expect(2) = 1e-15 Identities = 41/84 (48%), Positives = 54/84 (64%) Frame = +1 Query: 31 SDADYYYDMIYNVPFSSFLNSQHDNVGDGNESDSTISSETNVPQXXXXXXXXXXXXXXXX 210 S++DYYYDM+Y +P+SSF++ D +ESDSTISS+++ Sbjct: 125 SNSDYYYDMMYLLPYSSFVSLPQDVSSPISESDSTISSDSDT---VDVKEQKLEKNLLDL 181 Query: 211 YSGCGAMSTGLCLGANMSGVHLVT 282 YSGCGAMSTGLCLGA++ GV LVT Sbjct: 182 YSGCGAMSTGLCLGADIGGVKLVT 205 Score = 30.8 bits (68), Expect(2) = 1e-15 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = +3 Query: 399 KWAVDINQYTCQSTKSGNTIQRACQTAQAD 488 KWAVD+NQY C S K N + A + AD Sbjct: 206 KWAVDLNQYACDSLK-WNHPETAVRNESAD 234 >ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Glycine max] Length = 868 Score = 76.6 bits (187), Expect(2) = 4e-14 Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 11/105 (10%) Frame = +1 Query: 1 VDLDTKLVALSDADYYYDMIYNVPFSSFLNSQHDNVGDGNESDSTISSETN--------- 153 VDL+ K + DYY D Y +P+S+F+N +N G+E+ STISSETN Sbjct: 220 VDLEAKKETIPPCDYYCDTQYLLPYSTFVNLPSENGESGSETSSTISSETNGIGKYEVNS 279 Query: 154 --VPQXXXXXXXXXXXXXXXXYSGCGAMSTGLCLGANMSGVHLVT 282 Y GCGAMSTGLCLG N+SGV+LVT Sbjct: 280 QPKEAFLPEESKDPEMKLLDLYCGCGAMSTGLCLGGNLSGVNLVT 324 Score = 26.2 bits (56), Expect(2) = 4e-14 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = +3 Query: 399 KWAVDINQYTCQSTK 443 +WAVD+NQ+ C+ K Sbjct: 325 RWAVDLNQHACECLK 339 >gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum] Length = 824 Score = 72.8 bits (177), Expect(2) = 8e-14 Identities = 38/94 (40%), Positives = 51/94 (54%) Frame = +1 Query: 1 VDLDTKLVALSDADYYYDMIYNVPFSSFLNSQHDNVGDGNESDSTISSETNVPQXXXXXX 180 VDL+ K + DYY DM+Y + +SSF N + + +E S+ S+ + Sbjct: 184 VDLEAKNKEIPSCDYYCDMLYKLEYSSFTNLPPEGKTNASEEASSTISDDSPDTVNGANS 243 Query: 181 XXXXXXXXXXYSGCGAMSTGLCLGANMSGVHLVT 282 YSGCGAMSTGLCLGANM+G+ LVT Sbjct: 244 GSEDASLLDLYSGCGAMSTGLCLGANMAGLRLVT 277 Score = 28.9 bits (63), Expect(2) = 8e-14 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +3 Query: 399 KWAVDINQYTCQS 437 KWAVDIN+Y C+S Sbjct: 278 KWAVDINKYACES 290