BLASTX nr result

ID: Panax21_contig00006090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006090
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523184.1| GTP-dependent nucleic acid-binding protein e...   216   2e-54
ref|NP_174346.1| GTP-binding protein [Arabidopsis thaliana] gi|4...   213   1e-53
ref|XP_002893634.1| GTP binding protein [Arabidopsis lyrata subs...   213   1e-53
ref|XP_003546267.1| PREDICTED: obg-like ATPase 1-like [Glycine max]   213   1e-53
ref|NP_001242520.1| uncharacterized protein LOC100793501 [Glycin...   213   1e-53

>ref|XP_002523184.1| GTP-dependent nucleic acid-binding protein engD, putative [Ricinus
           communis] gi|223537591|gb|EEF39215.1| GTP-dependent
           nucleic acid-binding protein engD, putative [Ricinus
           communis]
          Length = 394

 Score =  216 bits (549), Expect = 2e-54
 Identities = 105/110 (95%), Positives = 108/110 (98%)
 Frame = -3

Query: 439 NKLQSALPKIIKTGFSAINLIYFFTAGPDEVKCWQIRRQTKAPQAAGAIHTDFERGFICA 260
           NK+QSALPKIIKTGFSAINLIYFFTAGPDEVKCWQIRRQTKAPQAAGAIHTDFE+GFICA
Sbjct: 285 NKVQSALPKIIKTGFSAINLIYFFTAGPDEVKCWQIRRQTKAPQAAGAIHTDFEKGFICA 344

Query: 259 EVMKFEDLKELGSESAVKAAGKYRQEGKMYVVLDGDIIFFKFNVSGGGKK 110
           EVMKFEDLKELGSE+AVKAAGKYRQEGK YVV DGDIIFFKFNVSGGGKK
Sbjct: 345 EVMKFEDLKELGSEAAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 394


>ref|NP_174346.1| GTP-binding protein [Arabidopsis thaliana]
           gi|4587514|gb|AAD25745.1|AC007060_3 Similar to WO8E3.3
           gi|3880615 putative GTP-binding protein from C. elegans
           cosmid gb|Z92773. EST gb|AA597331 comes from this gene
           [Arabidopsis thaliana] gi|109134111|gb|ABG25054.1|
           At1g30580 [Arabidopsis thaliana]
           gi|332193125|gb|AEE31246.1| GTP-binding protein
           [Arabidopsis thaliana]
          Length = 394

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/110 (94%), Positives = 107/110 (97%)
 Frame = -3

Query: 439 NKLQSALPKIIKTGFSAINLIYFFTAGPDEVKCWQIRRQTKAPQAAGAIHTDFERGFICA 260
           NKLQSALP+IIKTGFSAINLIYFFTAGPDEVKCWQIRRQ+KAPQAAGAIHTDFERGFICA
Sbjct: 285 NKLQSALPRIIKTGFSAINLIYFFTAGPDEVKCWQIRRQSKAPQAAGAIHTDFERGFICA 344

Query: 259 EVMKFEDLKELGSESAVKAAGKYRQEGKMYVVLDGDIIFFKFNVSGGGKK 110
           EVMKFEDLKELG+E AVKAAGKYRQEGK YVV DGDIIFFKFNVSGGGKK
Sbjct: 345 EVMKFEDLKELGNEPAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 394


>ref|XP_002893634.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339476|gb|EFH69893.1| GTP binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score =  213 bits (543), Expect = 1e-53
 Identities = 104/110 (94%), Positives = 107/110 (97%)
 Frame = -3

Query: 439 NKLQSALPKIIKTGFSAINLIYFFTAGPDEVKCWQIRRQTKAPQAAGAIHTDFERGFICA 260
           NKLQSALP+IIKTGFSAINLIYFFTAGPDEVKCWQIRRQ+KAPQAAGAIHTDFERGFICA
Sbjct: 285 NKLQSALPRIIKTGFSAINLIYFFTAGPDEVKCWQIRRQSKAPQAAGAIHTDFERGFICA 344

Query: 259 EVMKFEDLKELGSESAVKAAGKYRQEGKMYVVLDGDIIFFKFNVSGGGKK 110
           EVMKFEDLKELG+E AVKAAGKYRQEGK YVV DGDIIFFKFNVSGGGKK
Sbjct: 345 EVMKFEDLKELGNEPAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 394


>ref|XP_003546267.1| PREDICTED: obg-like ATPase 1-like [Glycine max]
          Length = 394

 Score =  213 bits (542), Expect = 1e-53
 Identities = 105/110 (95%), Positives = 106/110 (96%)
 Frame = -3

Query: 439 NKLQSALPKIIKTGFSAINLIYFFTAGPDEVKCWQIRRQTKAPQAAGAIHTDFERGFICA 260
           NK QSAL KIIKTGFSAINLIYFFTAGPDEVKCWQIRRQTKAPQAAGAIHTDFERGFICA
Sbjct: 285 NKTQSALTKIIKTGFSAINLIYFFTAGPDEVKCWQIRRQTKAPQAAGAIHTDFERGFICA 344

Query: 259 EVMKFEDLKELGSESAVKAAGKYRQEGKMYVVLDGDIIFFKFNVSGGGKK 110
           EVMKFEDLKELGSESAVKAAGKY+QEGK YVV DGDIIFFKFNVSGGGKK
Sbjct: 345 EVMKFEDLKELGSESAVKAAGKYKQEGKTYVVQDGDIIFFKFNVSGGGKK 394


>ref|NP_001242520.1| uncharacterized protein LOC100793501 [Glycine max]
           gi|255642443|gb|ACU21485.1| unknown [Glycine max]
          Length = 394

 Score =  213 bits (542), Expect = 1e-53
 Identities = 105/110 (95%), Positives = 106/110 (96%)
 Frame = -3

Query: 439 NKLQSALPKIIKTGFSAINLIYFFTAGPDEVKCWQIRRQTKAPQAAGAIHTDFERGFICA 260
           NK QSAL KIIKTGFSAINLIYFFTAGPDEVKCWQIRRQTKAPQAAGAIHTDFERGFICA
Sbjct: 285 NKTQSALTKIIKTGFSAINLIYFFTAGPDEVKCWQIRRQTKAPQAAGAIHTDFERGFICA 344

Query: 259 EVMKFEDLKELGSESAVKAAGKYRQEGKMYVVLDGDIIFFKFNVSGGGKK 110
           EVMKFEDLKELGSESAVKAAGKY+QEGK YVV DGDIIFFKFNVSGGGKK
Sbjct: 345 EVMKFEDLKELGSESAVKAAGKYKQEGKTYVVQDGDIIFFKFNVSGGGKK 394


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