BLASTX nr result

ID: Panax21_contig00006089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006089
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA02696.1| 21D7 antigen [Daucus carota]                           97   1e-18
sp|Q06364.2|PSMD3_DAUCA RecName: Full=Probable 26S proteasome no...    97   1e-18
sp|P93768.1|PSMD3_TOBAC RecName: Full=Probable 26S proteasome no...    96   4e-18
ref|XP_004162914.1| PREDICTED: probable 26S proteasome non-ATPas...    91   1e-16
ref|XP_004144854.1| PREDICTED: probable 26S proteasome non-ATPas...    91   1e-16

>dbj|BAA02696.1| 21D7 antigen [Daucus carota]
          Length = 488

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/60 (81%), Positives = 57/60 (95%)
 Frame = -3

Query: 528 IASLIEAGAYAREVRRILRAVRLTIALRKKLKASVISHFLSFVLLPGSELHSRLSSYLPK 349
           IASLIE+GAYAREVRRILRAVRLTIALRKKL ASV++ FL+F L+PGSE+H+RL+SYLPK
Sbjct: 33  IASLIESGAYAREVRRILRAVRLTIALRKKLNASVVNAFLNFSLVPGSEVHARLASYLPK 92


>sp|Q06364.2|PSMD3_DAUCA RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit
           3; Short=26S proteasome subunit S3; AltName: Full=26S
           proteasome regulatory subunit RPN3; AltName:
           Full=Nuclear antigen 21D7
          Length = 489

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/60 (81%), Positives = 57/60 (95%)
 Frame = -3

Query: 528 IASLIEAGAYAREVRRILRAVRLTIALRKKLKASVISHFLSFVLLPGSELHSRLSSYLPK 349
           IASLIE+GAYAREVRRILRAVRLTIALRKKL ASV++ FL+F L+PGSE+H+RL+SYLPK
Sbjct: 33  IASLIESGAYAREVRRILRAVRLTIALRKKLNASVVNAFLNFSLVPGSEVHARLASYLPK 92


>sp|P93768.1|PSMD3_TOBAC RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit
           3; Short=26S proteasome subunit S3; AltName: Full=26S
           proteasome regulatory subunit RPN3; AltName:
           Full=Nuclear antigen 21D7 gi|1864003|dbj|BAA19252.1|
           21D7 [Nicotiana tabacum]
          Length = 488

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/60 (81%), Positives = 56/60 (93%)
 Frame = -3

Query: 528 IASLIEAGAYAREVRRILRAVRLTIALRKKLKASVISHFLSFVLLPGSELHSRLSSYLPK 349
           IASLIE GAYAREVRRI RAVRLT+ALRKKLKAS +S FL++VL+PGSE+HSRLSS+LPK
Sbjct: 32  IASLIETGAYAREVRRISRAVRLTMALRKKLKASSLSAFLNYVLVPGSEVHSRLSSFLPK 91


>ref|XP_004162914.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit
           3-like [Cucumis sativus]
          Length = 176

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/60 (71%), Positives = 55/60 (91%)
 Frame = -3

Query: 528 IASLIEAGAYAREVRRILRAVRLTIALRKKLKASVISHFLSFVLLPGSELHSRLSSYLPK 349
           I SL+E GAYAREVRRI+RA+RLT+ALR+KLKASV+S FL+F L PGS++H+RLSS++PK
Sbjct: 28  IVSLLETGAYAREVRRIVRAIRLTMALRRKLKASVLSSFLNFALPPGSDVHTRLSSFIPK 87


>ref|XP_004144854.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit
           3-like [Cucumis sativus]
          Length = 481

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/60 (71%), Positives = 55/60 (91%)
 Frame = -3

Query: 528 IASLIEAGAYAREVRRILRAVRLTIALRKKLKASVISHFLSFVLLPGSELHSRLSSYLPK 349
           I SL+E GAYAREVRRI+RA+RLT+ALR+KLKASV+S FL+F L PGS++H+RLSS++PK
Sbjct: 28  IVSLLETGAYAREVRRIVRAIRLTMALRRKLKASVLSSFLNFALPPGSDVHTRLSSFIPK 87


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