BLASTX nr result

ID: Panax21_contig00006078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006078
         (1286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282244.1| PREDICTED: uncharacterized protein LOC100250...   148   3e-33
ref|XP_002308072.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-25
ref|XP_002527188.1| conserved hypothetical protein [Ricinus comm...   100   6e-19
ref|XP_004146157.1| PREDICTED: uncharacterized protein LOC101219...    90   1e-15
ref|XP_002531137.1| conserved hypothetical protein [Ricinus comm...    89   2e-15

>ref|XP_002282244.1| PREDICTED: uncharacterized protein LOC100250879 [Vitis vinifera]
          Length = 424

 Score =  148 bits (373), Expect = 3e-33
 Identities = 101/250 (40%), Positives = 137/250 (54%), Gaps = 9/250 (3%)
 Frame = -1

Query: 743 SVNLTHSNSESNIRVMQNNISDPTALCKISPPCEKFPSLGKNQFVSVESNISANVGLAH- 567
           +++ TH   +S+  V QNN    T       P E FP LG NQ ++VE+N   N G  + 
Sbjct: 176 NMDSTHLVLDSDRHVTQNNSLATTR--NFHFPYENFP-LGSNQSMTVETNTPLNFGSVYP 232

Query: 566 -----QFQPEVSRLGFQTQK--NSKNIIVGTQVYPLVTEPAEMGC-LKELFSCIRDDITL 411
                 FQ E S LGFQ  +  N+  + VG  +   + EP+EMG  L+ LFS    +  L
Sbjct: 233 LYYGTHFQNEESHLGFQMPETANANTVFVGAPIGTSIAEPSEMGIILQNLFSSDGTENVL 292

Query: 410 NRITGADSRDNHEKASELT*CDLSLRLGLFSDPG*SRGKGSACDIDSVGLSNSQEGAQLN 231
           N+    + RD   K   +  CDLSLRLGL SDP   + K SA D + VG S+SQEGA+++
Sbjct: 293 NKNAQENFRDTCGK-EPVAECDLSLRLGLSSDPCMRKEKCSAPDTEDVGSSSSQEGAKVS 351

Query: 230 DLIPAKNKEFSFFSVETTNDPFGFSTSSGNFEGEVQSAEAAIRKRKLPSNNNVGDGQFSR 51
            L P K+K F FF  ET N PFG  ++  N   E Q+ +A +RKRK P NN++  GQF  
Sbjct: 352 GLSPGKSKGFCFFPSETANSPFGSCSNKWNSGDEGQNMDATVRKRKAPFNNDLEGGQFFL 411

Query: 50  QPEPTSNRFS 21
            PE  S+ F+
Sbjct: 412 SPEIRSDHFT 421


>ref|XP_002308072.1| predicted protein [Populus trichocarpa] gi|222854048|gb|EEE91595.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  122 bits (306), Expect = 2e-25
 Identities = 91/273 (33%), Positives = 131/273 (47%), Gaps = 8/273 (2%)
 Frame = -1

Query: 797 LPLHFASRSIDERPTTVNSVNLTHSNSESNIRVMQNNISDPTALCKISPPCEKFPSLGKN 618
           +P+H  ++    R T   + +L+ S S  ++    N       L +  PP       G N
Sbjct: 1   MPVHSINQLNIARDTATGNPDLSVSESNHHLAENSNVAYSYPFLYENIPP-------GSN 53

Query: 617 QFVSVESNISANVGLAH------QFQPEVSRL--GFQTQKNSKNIIVGTQVYPLVTEPAE 462
           Q  + E+++  N G  +      Q+Q E S +   F  +  S  I VG  +   V    E
Sbjct: 54  QLTTREADMHQNFGSVYPLYCGNQYQIEASDVVSQFPMKTKSNTIFVGKPIGTSVAPHRE 113

Query: 461 MGCLKELFSCIRDDITLNRITGADSRDNHEKASELT*CDLSLRLGLFSDPG*SRGKGSAC 282
           MG L+ +FSC   ++   RIT AD R+ H+K +  T CDLSLRLGL+SDPG S  +  A 
Sbjct: 114 MGVLQTVFSCSSAEVGSTRITQADFRNTHDKPTG-TQCDLSLRLGLYSDPGMSIERNQAQ 172

Query: 281 DIDSVGLSNSQEGAQLNDLIPAKNKEFSFFSVETTNDPFGFSTSSGNFEGEVQSAEAAIR 102
           + ++ G S  QE  + +     +NKEF FF   +T DP G  +     EG+ Q+ E  IR
Sbjct: 173 ENENAGSSRFQERDKFSVFSQQRNKEFCFFPGTSTRDPSGSCSVKWVSEGDDQNLETTIR 232

Query: 101 KRKLPSNNNVGDGQFSRQPEPTSNRFSSTMRWP 3
           KRK P  +N  DG F  Q    SN F   +  P
Sbjct: 233 KRKAPFRDNAEDGHFCWQ----SNMFIGRIEGP 261


>ref|XP_002527188.1| conserved hypothetical protein [Ricinus communis]
           gi|223533453|gb|EEF35201.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 373

 Score =  100 bits (250), Expect = 6e-19
 Identities = 75/206 (36%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
 Frame = -1

Query: 761 RPTTVNSVNLTHSNSESNIRVMQNNISDPTALCKISPPCEKFPSLGKNQFVSVESNISAN 582
           RPTT  +VN T   SESN  + +++  D  A C   P      SLG +Q +S E N   N
Sbjct: 174 RPTT--AVNSTLPVSESNCHLTESSNID--ASCSY-PLLYDNISLGSSQLMSKEINKQLN 228

Query: 581 VGLAH------QFQPEVSRLGFQT-QKNSKNIIVGTQVYPLVTEPAEMGCLKELFSCIRD 423
           +G  +       +  +   L  Q  +KNS  I VGT +     EPAEM    +  +C   
Sbjct: 229 LGSVYPLYYGNNYHIKQPHLASQVPEKNSNTIFVGTPISTSAAEPAEMSVFHDFLTCPSA 288

Query: 422 DITLNRITGADSRDNHEKASELT*CDLSLRLGLFSDPG*SRGKGSACDIDSVGLSNSQEG 243
           +I+  RI+ AD  + HEK S +  CDLSLRLGLF+D   +  +    + + VG SNSQ+ 
Sbjct: 289 EISAKRISQADLGNTHEKPSGVQ-CDLSLRLGLFTDLSVNMKRSLVQETEDVGSSNSQDR 347

Query: 242 AQLNDLIPAKNKEFSFFSVETTNDPF 165
           ++ ++    KNKE  F     TNDPF
Sbjct: 348 SKSSNFYLQKNKELFFSPSRNTNDPF 373


>ref|XP_004146157.1| PREDICTED: uncharacterized protein LOC101219661 [Cucumis sativus]
            gi|449495078|ref|XP_004159728.1| PREDICTED:
            uncharacterized protein LOC101228414 [Cucumis sativus]
          Length = 210

 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = -3

Query: 1284 EFKLLERLGEGSKTTAIIGEIFD*LNLDLVVMSMEAIHSKHVDANLLAEFI 1132
            EFKLLERLGEGSK TAIIGE+ D LNLDLVV+SMEAIHSKHVDANLLAEFI
Sbjct: 151  EFKLLERLGEGSKPTAIIGEVADDLNLDLVVLSMEAIHSKHVDANLLAEFI 201


>ref|XP_002531137.1| conserved hypothetical protein [Ricinus communis]
            gi|223529250|gb|EEF31222.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 212

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 45/51 (88%), Positives = 48/51 (94%)
 Frame = -3

Query: 1284 EFKLLERLGEGSKTTAIIGEIFD*LNLDLVVMSMEAIHSKHVDANLLAEFI 1132
            EFKLLERLGEG+K TAIIGE+ D LNLDLVV+SMEAIHSKHVDANLLAEFI
Sbjct: 153  EFKLLERLGEGNKPTAIIGEVADDLNLDLVVLSMEAIHSKHVDANLLAEFI 203


Top