BLASTX nr result

ID: Panax21_contig00006068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006068
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276984.1| PREDICTED: translation initiation factor IF-...   273   4e-71
ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|2...   268   1e-69
ref|XP_002533227.1| translation initiation factor if-3, putative...   265   1e-68
ref|XP_004144726.1| PREDICTED: translation initiation factor IF-...   259   8e-67
ref|XP_003519163.1| PREDICTED: translation initiation factor IF-...   257   2e-66

>ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
           gi|297743667|emb|CBI36550.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  273 bits (698), Expect = 4e-71
 Identities = 152/247 (61%), Positives = 185/247 (74%), Gaps = 1/247 (0%)
 Frame = -1

Query: 748 GLRFNFPTSSSHLEFAISVSHNSIAAXXXXXXXXXXXXXXXXXXXXRQGNSDDDQALDIS 569
           G+R   PT S    F+ S+ H S+ A                     Q +SDDDQALD+S
Sbjct: 34  GVRLCSPTFSKCRSFSSSL-HRSVTARYGGYRSSGDAWRSR------QRDSDDDQALDVS 86

Query: 568 SIRSENVRLIDDKQNMIGIVSKGEALQRADDAELDLVILSPDADPPVVRLMDYNKFXXXX 389
           SIRS +VRLID++QNM+G+VSK +A+Q A+DAELDLV+LSPDADPPVVR+MDYNK+    
Sbjct: 87  SIRSASVRLIDEQQNMVGVVSKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYEL 146

Query: 388 XXXXXXXXXKSAAHRMDLKELKMGYNIDVHDYSVRLKAAQKFLKDGDKVKVIVNLKGRES 209
                    KSAA+RMDLKELKMGYNID HDYSVRLKAA+KFL+DGDKVK+IVNLKGRE+
Sbjct: 147 QKKKRGQQKKSAANRMDLKELKMGYNIDSHDYSVRLKAARKFLQDGDKVKIIVNLKGREN 206

Query: 208 DFRNNAIELIRRFQNDIGELAVEESKSFRERSMTLVLVPNKAVVVQKAPESPKKKEKT-A 32
           +FRN AIELIRRFQND+GELA EESK+F  R++ +VLVPNKA ++QK  ES KK EK+ A
Sbjct: 207 EFRNIAIELIRRFQNDVGELATEESKNFSVRNIFIVLVPNKA-LLQKGQESSKKTEKSAA 265

Query: 31  SEVSAGV 11
           +E+SAGV
Sbjct: 266 TEISAGV 272


>ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score =  268 bits (686), Expect = 1e-69
 Identities = 140/200 (70%), Positives = 168/200 (84%), Gaps = 1/200 (0%)
 Frame = -1

Query: 607 QGNSDDDQALDISSIRSENVRLIDDKQNMIGIVSKGEALQRADDAELDLVILSPDADPPV 428
           + +SDDDQAL+ISSIRS  VRLID +QNM+G+V+  +A+Q A+D EL+LVI+SPDADPPV
Sbjct: 80  KSDSDDDQALNISSIRSATVRLIDQQQNMVGVVTVRDAIQMAEDTELNLVIVSPDADPPV 139

Query: 427 VRLMDYNKFXXXXXXXXXXXXXKSAAHRMDLKELKMGYNIDVHDYSVRLKAAQKFLKDGD 248
           VR+MDYNKF             KSAA RMDLKELKMGYNID HDY VRL+AA+KFLKDGD
Sbjct: 140 VRIMDYNKFRYEQQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYDVRLRAARKFLKDGD 199

Query: 247 KVKVIVNLKGRESDFRNNAIELIRRFQNDIGELAVEESKSFRERSMTLVLVPNKAVVVQK 68
           KVKVIVNLKGRE++FRNNAIEL+RRFQND+GELA EESK+FR+R+  + LVPNKA ++QK
Sbjct: 200 KVKVIVNLKGRENEFRNNAIELLRRFQNDVGELATEESKNFRDRNAFITLVPNKA-LLQK 258

Query: 67  APESPKKKEKTAS-EVSAGV 11
           A E PKKK+K+A+ EVSAGV
Sbjct: 259 AQEPPKKKDKSAADEVSAGV 278


>ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
           gi|223526947|gb|EEF29148.1| translation initiation
           factor if-3, putative [Ricinus communis]
          Length = 274

 Score =  265 bits (676), Expect = 1e-68
 Identities = 137/200 (68%), Positives = 167/200 (83%), Gaps = 1/200 (0%)
 Frame = -1

Query: 607 QGNSDDDQALDISSIRSENVRLIDDKQNMIGIVSKGEALQRADDAELDLVILSPDADPPV 428
           Q +S+DD ALDIS+IRS  VRLID++QNM+G+V K EA+Q A++A LDLVILSPDADPPV
Sbjct: 76  QSDSEDDHALDISTIRSATVRLIDEQQNMVGVVPKSEAIQMAENAALDLVILSPDADPPV 135

Query: 427 VRLMDYNKFXXXXXXXXXXXXXKSAAHRMDLKELKMGYNIDVHDYSVRLKAAQKFLKDGD 248
           VR+MDYNK+             KSAA RMDLKELKMGYNID HDY VRL+AA+KFLKDGD
Sbjct: 136 VRIMDYNKYRYELQKKKKGQQKKSAATRMDLKELKMGYNIDQHDYDVRLRAARKFLKDGD 195

Query: 247 KVKVIVNLKGRESDFRNNAIELIRRFQNDIGELAVEESKSFRERSMTLVLVPNKAVVVQK 68
           KVKVIVNLKGRE++FRN AIELIRRFQND+GELA EE+K+FR+R++ + L PNKA ++QK
Sbjct: 196 KVKVIVNLKGRENEFRNIAIELIRRFQNDVGELATEETKNFRDRNIFITLAPNKA-ILQK 254

Query: 67  APESPKKKEKTA-SEVSAGV 11
           + E PKK++K+A +EVSAGV
Sbjct: 255 SQEPPKKRDKSAVNEVSAGV 274


>ref|XP_004144726.1| PREDICTED: translation initiation factor IF-3-like [Cucumis
           sativus]
          Length = 299

 Score =  259 bits (661), Expect = 8e-67
 Identities = 137/197 (69%), Positives = 165/197 (83%), Gaps = 1/197 (0%)
 Frame = -1

Query: 598 SDDDQALDISSIRSENVRLIDDKQNMIGIVSKGEALQRADDAELDLVILSPDADPPVVRL 419
           S+D+  LDIS+I+S NVRLID +QNM+G+VSK +A+Q A+DAELDLV++SPDADPPVVR+
Sbjct: 104 SNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRI 163

Query: 418 MDYNKFXXXXXXXXXXXXXKSAAHRMDLKELKMGYNIDVHDYSVRLKAAQKFLKDGDKVK 239
           MDYNK+             KSAA RMDLKELKMGYNID HDYSVRLKAA+KFLKDGDKVK
Sbjct: 164 MDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVK 223

Query: 238 VIVNLKGRESDFRNNAIELIRRFQNDIGELAVEESKSFRERSMTLVLVPNKAVVVQKAPE 59
           VIVNLKGRE++FRN AIELIRRFQ ++GELA EE+K+FR+R++ +VLVPNKA V+QKA E
Sbjct: 224 VIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKA-VLQKAQE 282

Query: 58  SPKKKEKTA-SEVSAGV 11
            PKKK+K A + VSA V
Sbjct: 283 PPKKKDKPAVNGVSASV 299


>ref|XP_003519163.1| PREDICTED: translation initiation factor IF-3-like isoform 1
           [Glycine max]
          Length = 275

 Score =  257 bits (657), Expect = 2e-66
 Identities = 129/192 (67%), Positives = 160/192 (83%)
 Frame = -1

Query: 601 NSDDDQALDISSIRSENVRLIDDKQNMIGIVSKGEALQRADDAELDLVILSPDADPPVVR 422
           + DDD+ALD+S++RS+ VRLID  QNM+G+VS  +A+Q A+D ELDLVILSPDADPPVVR
Sbjct: 77  SDDDDKALDLSTLRSDTVRLIDQSQNMVGVVSIDDAIQMAEDVELDLVILSPDADPPVVR 136

Query: 421 LMDYNKFXXXXXXXXXXXXXKSAAHRMDLKELKMGYNIDVHDYSVRLKAAQKFLKDGDKV 242
           +MDY+K+             KSAA+RMDLKELKMGYNID HDYSVRLKAAQKFLKDGDKV
Sbjct: 137 IMDYSKYRYEQQKKKREQQKKSAANRMDLKELKMGYNIDEHDYSVRLKAAQKFLKDGDKV 196

Query: 241 KVIVNLKGRESDFRNNAIELIRRFQNDIGELAVEESKSFRERSMTLVLVPNKAVVVQKAP 62
           KVIVNLKGRE++FRN AI LI RFQND+GEL +EE+K+FR+R++ ++LVPNK V VQK  
Sbjct: 197 KVIVNLKGRENEFRNMAIGLITRFQNDVGELGIEETKNFRDRNIFIILVPNK-VAVQKTQ 255

Query: 61  ESPKKKEKTASE 26
           E PKK++K+A++
Sbjct: 256 EPPKKRDKSAAD 267


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