BLASTX nr result

ID: Panax21_contig00006063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006063
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311250.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
ref|XP_002520803.1| Biotin carboxyl carrier protein of acetyl-Co...   179   2e-43
ref|XP_002316186.1| predicted protein [Populus trichocarpa] gi|2...   177   8e-43
ref|XP_002278151.2| PREDICTED: biotin carboxyl carrier protein o...   175   3e-42
gb|ACU19863.1| unknown [Glycine max]                                  167   7e-40

>ref|XP_002311250.1| predicted protein [Populus trichocarpa] gi|222851070|gb|EEE88617.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  185 bits (469), Expect = 4e-45
 Identities = 91/102 (89%), Positives = 98/102 (96%)
 Frame = +1

Query: 13  KSRTLAALEASGASGYVLVASPTVGSFRKGRTLKGKKQPPSCKEGDLIKEGQVIGFLDQF 192
           KS  LAALEASGASGYVLVASPTVGSFR+ RT+KGKKQPP CKEGD+IKEGQVIG+LDQF
Sbjct: 158 KSSKLAALEASGASGYVLVASPTVGSFRRNRTVKGKKQPPICKEGDVIKEGQVIGYLDQF 217

Query: 193 GTELPVKSDVAGEVLKLLFDDGEAVGYGDPLIAVLPSFHGIS 318
           GTELPVKSDVAGEVLKLLF+DG+AVGYGDPLIAVLPSFHGI+
Sbjct: 218 GTELPVKSDVAGEVLKLLFNDGDAVGYGDPLIAVLPSFHGIN 259


>ref|XP_002520803.1| Biotin carboxyl carrier protein of acetyl-CoA carboxylase, putative
           [Ricinus communis] gi|223539934|gb|EEF41512.1| Biotin
           carboxyl carrier protein of acetyl-CoA carboxylase,
           putative [Ricinus communis]
          Length = 258

 Score =  179 bits (454), Expect = 2e-43
 Identities = 88/101 (87%), Positives = 96/101 (95%)
 Frame = +1

Query: 13  KSRTLAALEASGASGYVLVASPTVGSFRKGRTLKGKKQPPSCKEGDLIKEGQVIGFLDQF 192
           KS  LAALEASGA+GYVLVASPTVGSFR+ R++KGK+QPP  KEGDLIKEGQVIG+LDQF
Sbjct: 157 KSAKLAALEASGATGYVLVASPTVGSFRRNRSVKGKRQPPIFKEGDLIKEGQVIGYLDQF 216

Query: 193 GTELPVKSDVAGEVLKLLFDDGEAVGYGDPLIAVLPSFHGI 315
           GTELPVKSDVAGEVLKLLFDDG+AVGYGDPL+AVLPSFHGI
Sbjct: 217 GTELPVKSDVAGEVLKLLFDDGDAVGYGDPLVAVLPSFHGI 257


>ref|XP_002316186.1| predicted protein [Populus trichocarpa] gi|222865226|gb|EEF02357.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  177 bits (449), Expect = 8e-43
 Identities = 88/105 (83%), Positives = 95/105 (90%)
 Frame = +1

Query: 1   VPVEKSRTLAALEASGASGYVLVASPTVGSFRKGRTLKGKKQPPSCKEGDLIKEGQVIGF 180
           V   KS  LA LEASGASGYVLVASPTVGSFR+ RT+KGKKQP  CKEGD+IKEGQVIG+
Sbjct: 145 VSFRKSSKLAVLEASGASGYVLVASPTVGSFRRNRTVKGKKQPLICKEGDVIKEGQVIGY 204

Query: 181 LDQFGTELPVKSDVAGEVLKLLFDDGEAVGYGDPLIAVLPSFHGI 315
           LDQFGTELPVKSDVAGEVLKLLF+DG+AVGYGDPL+AVLPSFH I
Sbjct: 205 LDQFGTELPVKSDVAGEVLKLLFNDGDAVGYGDPLVAVLPSFHAI 249


>ref|XP_002278151.2| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase-like [Vitis vinifera]
           gi|297736542|emb|CBI25413.3| unnamed protein product
           [Vitis vinifera]
          Length = 288

 Score =  175 bits (444), Expect = 3e-42
 Identities = 84/103 (81%), Positives = 95/103 (92%)
 Frame = +1

Query: 7   VEKSRTLAALEASGASGYVLVASPTVGSFRKGRTLKGKKQPPSCKEGDLIKEGQVIGFLD 186
           +EK   L ALEASGA+ YVLV+SPTVGSFR GRTLKGK+QPP CKEGD+IKEGQVIG+LD
Sbjct: 185 LEKPSKLRALEASGANAYVLVSSPTVGSFRTGRTLKGKRQPPVCKEGDVIKEGQVIGYLD 244

Query: 187 QFGTELPVKSDVAGEVLKLLFDDGEAVGYGDPLIAVLPSFHGI 315
           QFG+ELPVKSD AGEVLK++F+DGEAVGYGDPL+AVLPSFHGI
Sbjct: 245 QFGSELPVKSDTAGEVLKVIFNDGEAVGYGDPLVAVLPSFHGI 287


>gb|ACU19863.1| unknown [Glycine max]
          Length = 291

 Score =  167 bits (424), Expect = 7e-40
 Identities = 84/105 (80%), Positives = 92/105 (87%)
 Frame = +1

Query: 1   VPVEKSRTLAALEASGASGYVLVASPTVGSFRKGRTLKGKKQPPSCKEGDLIKEGQVIGF 180
           V  EKS  LAALEASG + YVLV+SPTVG FR+GRT+KGKKQPP CKEGD+IKEGQVIG+
Sbjct: 186 VSKEKSPRLAALEASGTNTYVLVSSPTVGLFRRGRTVKGKKQPPICKEGDVIKEGQVIGY 245

Query: 181 LDQFGTELPVKSDVAGEVLKLLFDDGEAVGYGDPLIAVLPSFHGI 315
           LDQFGT LP+KSDVAGEVLKLL +DGE VGYGDPLIAVL SFH I
Sbjct: 246 LDQFGTGLPIKSDVAGEVLKLLVEDGEPVGYGDPLIAVLSSFHDI 290


Top