BLASTX nr result

ID: Panax21_contig00006062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006062
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314801.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
ref|XP_002526033.1| conserved hypothetical protein [Ricinus comm...   142   2e-32
ref|XP_002284485.1| PREDICTED: uncharacterized protein LOC100249...   139   3e-31
ref|XP_003589653.1| hypothetical protein MTR_1g031620 [Medicago ...   138   4e-31
ref|XP_003553832.1| PREDICTED: uncharacterized protein LOC100781...   130   1e-28

>ref|XP_002314801.1| predicted protein [Populus trichocarpa] gi|222863841|gb|EEF00972.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  152 bits (383), Expect = 4e-35
 Identities = 70/101 (69%), Positives = 85/101 (84%)
 Frame = -3

Query: 305 MSHQSALNTSKALEGVHGVHLVPHSPFSLEEIKQHGDFHQSRRESSAVGASQLLIVQRVW 126
           MSHQS  N SK LEGVHG+H+VPHSPF+L+EI Q GDF QS  ESS  G +QLL++QRVW
Sbjct: 1   MSHQSTFNPSKTLEGVHGIHVVPHSPFALKEINQQGDFPQSTCESSGNGLNQLLLMQRVW 60

Query: 125 QQRPSCLRPIRCSLHGDRNLAETIANVLTSLPFVALGIRTP 3
           QQRP CLRPI+  +HGD++LAET+ANV+TSLPF+ALGI+ P
Sbjct: 61  QQRPGCLRPIQGCIHGDQHLAETVANVITSLPFIALGIQAP 101


>ref|XP_002526033.1| conserved hypothetical protein [Ricinus communis]
           gi|223534680|gb|EEF36373.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 262

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/113 (59%), Positives = 88/113 (77%)
 Frame = -3

Query: 341 AISLIRLIVD*LMSHQSALNTSKALEGVHGVHLVPHSPFSLEEIKQHGDFHQSRRESSAV 162
           A  L  +++D +M+ QS  N SKALEGVHG+H+VPHSPF+LEEI   GDF QS   +   
Sbjct: 3   AFLLATILID-IMNRQSTTNPSKALEGVHGIHVVPHSPFALEEITHQGDFSQSTCGNLVN 61

Query: 161 GASQLLIVQRVWQQRPSCLRPIRCSLHGDRNLAETIANVLTSLPFVALGIRTP 3
            A+Q L++QR W+QRP CLRPIRC ++GD++LAET+ANVLTSLPF+ALG++ P
Sbjct: 62  RANQQLLLQRAWEQRPGCLRPIRCCINGDKHLAETVANVLTSLPFIALGLQAP 114


>ref|XP_002284485.1| PREDICTED: uncharacterized protein LOC100249059 [Vitis vinifera]
           gi|147801559|emb|CAN77015.1| hypothetical protein
           VITISV_036885 [Vitis vinifera]
           gi|297737691|emb|CBI26892.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  139 bits (349), Expect = 3e-31
 Identities = 66/101 (65%), Positives = 84/101 (83%)
 Frame = -3

Query: 305 MSHQSALNTSKALEGVHGVHLVPHSPFSLEEIKQHGDFHQSRRESSAVGASQLLIVQRVW 126
           MSHQS  N S+AL+GVHGV +VPHSPF+LEEI + GDF +S  E S++ A+Q L++Q VW
Sbjct: 1   MSHQSKSNPSRALDGVHGVRVVPHSPFALEEITKPGDFDRSTCERSSIEANQRLLMQ-VW 59

Query: 125 QQRPSCLRPIRCSLHGDRNLAETIANVLTSLPFVALGIRTP 3
           QQRP+CLRP+RC L+GD +L ET+ANVLTSLPF+ALGI+ P
Sbjct: 60  QQRPACLRPVRCCLNGDESLGETVANVLTSLPFIALGIQAP 100


>ref|XP_003589653.1| hypothetical protein MTR_1g031620 [Medicago truncatula]
           gi|217071696|gb|ACJ84208.1| unknown [Medicago
           truncatula] gi|355478701|gb|AES59904.1| hypothetical
           protein MTR_1g031620 [Medicago truncatula]
           gi|388519567|gb|AFK47845.1| unknown [Medicago
           truncatula]
          Length = 251

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/103 (66%), Positives = 79/103 (76%), Gaps = 2/103 (1%)
 Frame = -3

Query: 305 MSHQSALNTSKALEGVHGVHLVPHSPFSLEEIKQHGDFHQSRRESSAVGASQLLIVQRVW 126
           MS Q  LN S+ALEGVHGVH+VPHSPFSL E  Q G  H S    S   A+QLL++QRVW
Sbjct: 1   MSQQRTLNHSRALEGVHGVHVVPHSPFSLTESNQTGGLHPSTGGPSTTEANQLLLMQRVW 60

Query: 125 QQRPSCLRPIRC--SLHGDRNLAETIANVLTSLPFVALGIRTP 3
           QQRP+CLRPI C  S HGD++LAETIANVLTS+PF+ALG+  P
Sbjct: 61  QQRPACLRPIHCSASCHGDQHLAETIANVLTSIPFIALGVNAP 103


>ref|XP_003553832.1| PREDICTED: uncharacterized protein LOC100781322 [Glycine max]
          Length = 251

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/103 (61%), Positives = 77/103 (74%), Gaps = 2/103 (1%)
 Frame = -3

Query: 305 MSHQSALNTSKALEGVHGVHLVPHSPFSLEEIKQHGDFHQSRRESSAVGASQLLIVQRVW 126
           M+  S LN S+ALEGVHGV + P+SPF L E  Q GDF  S   +S   A+QLL++QR+W
Sbjct: 1   MTQNSILNHSRALEGVHGVQVAPNSPFDLTETNQSGDFRTSTGGASTTEANQLLLMQRLW 60

Query: 125 QQRPSCLRPIRC--SLHGDRNLAETIANVLTSLPFVALGIRTP 3
           QQRP+CLRPI C  S HGD+ LAET+ANVLTS+PF+ALGI  P
Sbjct: 61  QQRPACLRPIHCGISCHGDQTLAETVANVLTSIPFIALGIHAP 103


Top