BLASTX nr result

ID: Panax21_contig00006044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006044
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269370.2| PREDICTED: peroxisome biogenesis protein 6-l...   295   8e-78
emb|CBI32241.3| unnamed protein product [Vitis vinifera]              295   8e-78
emb|CAN69109.1| hypothetical protein VITISV_025716 [Vitis vinifera]   295   8e-78
ref|XP_002520662.1| peroxisome assembly factor-2, putative [Rici...   251   1e-64
ref|NP_171799.2| peroxin 6 [Arabidopsis thaliana] gi|75330784|sp...   238   1e-60

>ref|XP_002269370.2| PREDICTED: peroxisome biogenesis protein 6-like [Vitis vinifera]
          Length = 935

 Score =  295 bits (756), Expect = 8e-78
 Identities = 161/262 (61%), Positives = 198/262 (75%)
 Frame = +3

Query: 126 MVERRKPLVLSSTKTLVDSLLNSSKTKERKIETERPNQLPGDVTSPTLQLRAGILRLSND 305
           MVERRKPLVLSSTK L+DS+ NS++  +R   T   N+L  + +SPTL L  GILRLS++
Sbjct: 1   MVERRKPLVLSSTKILLDSIRNSARLNKRDGVTG--NELSANESSPTLHLPVGILRLSDE 58

Query: 306 NRMDILDPKIVSLDDAALVGLSTSVLKRLSITSGSLILVKNLETNIQRIGQAVVLDPPKT 485
             +   DPK+  LDD+ALVGL TS LKRLS+TSGS +LV+N+ETN+ RI   VVLD P+ 
Sbjct: 59  KSVSS-DPKLALLDDSALVGLPTSALKRLSVTSGSPVLVRNVETNVWRIAHVVVLDSPRA 117

Query: 486 REASSEDKLPPSKSSRVMLVFPSYNFSQSRCAPFEPEVSYLSSLLAFNLNLHVSCLKSLV 665
              SS+ KLP S S   ML+FPS  + Q+     + EV+YLS LLAFNL+LH+SCLKSLV
Sbjct: 118 HGHSSDSKLPLSHSPHTMLIFPSLKYPQNDSVLLDGEVAYLSPLLAFNLDLHISCLKSLV 177

Query: 666 HQGKENLASLFEAKVDDETNENGSKDSIINLGVESWSQSPRFASHLRASFVKIPECGALE 845
           HQGKE LA LFEAK D+ET   GS+ S I+L +E  ++ PRFASHLRASFVKIPECG LE
Sbjct: 178 HQGKETLAYLFEAKADEETRGRGSEASPISLSLEQSARLPRFASHLRASFVKIPECGTLE 237

Query: 846 SLKGSSSIEAEDRQDMIDLALN 911
           SL+G+SSIEAEDRQ+MIDLAL+
Sbjct: 238 SLQGNSSIEAEDRQEMIDLALH 259


>emb|CBI32241.3| unnamed protein product [Vitis vinifera]
          Length = 938

 Score =  295 bits (756), Expect = 8e-78
 Identities = 161/262 (61%), Positives = 198/262 (75%)
 Frame = +3

Query: 126 MVERRKPLVLSSTKTLVDSLLNSSKTKERKIETERPNQLPGDVTSPTLQLRAGILRLSND 305
           MVERRKPLVLSSTK L+DS+ NS++  +R   T   N+L  + +SPTL L  GILRLS++
Sbjct: 1   MVERRKPLVLSSTKILLDSIRNSARLNKRDGVTG--NELSANESSPTLHLPVGILRLSDE 58

Query: 306 NRMDILDPKIVSLDDAALVGLSTSVLKRLSITSGSLILVKNLETNIQRIGQAVVLDPPKT 485
             +   DPK+  LDD+ALVGL TS LKRLS+TSGS +LV+N+ETN+ RI   VVLD P+ 
Sbjct: 59  KSVSS-DPKLALLDDSALVGLPTSALKRLSVTSGSPVLVRNVETNVWRIAHVVVLDSPRA 117

Query: 486 REASSEDKLPPSKSSRVMLVFPSYNFSQSRCAPFEPEVSYLSSLLAFNLNLHVSCLKSLV 665
              SS+ KLP S S   ML+FPS  + Q+     + EV+YLS LLAFNL+LH+SCLKSLV
Sbjct: 118 HGHSSDSKLPLSHSPHTMLIFPSLKYPQNDSVLLDGEVAYLSPLLAFNLDLHISCLKSLV 177

Query: 666 HQGKENLASLFEAKVDDETNENGSKDSIINLGVESWSQSPRFASHLRASFVKIPECGALE 845
           HQGKE LA LFEAK D+ET   GS+ S I+L +E  ++ PRFASHLRASFVKIPECG LE
Sbjct: 178 HQGKETLAYLFEAKADEETRGRGSEASPISLSLEQSARLPRFASHLRASFVKIPECGTLE 237

Query: 846 SLKGSSSIEAEDRQDMIDLALN 911
           SL+G+SSIEAEDRQ+MIDLAL+
Sbjct: 238 SLQGNSSIEAEDRQEMIDLALH 259


>emb|CAN69109.1| hypothetical protein VITISV_025716 [Vitis vinifera]
          Length = 1241

 Score =  295 bits (756), Expect = 8e-78
 Identities = 161/262 (61%), Positives = 198/262 (75%)
 Frame = +3

Query: 126 MVERRKPLVLSSTKTLVDSLLNSSKTKERKIETERPNQLPGDVTSPTLQLRAGILRLSND 305
           MVERRKPLVLSSTK L+DS+ NS++  +R   T   N+L  + +SPTL L  GILRLS++
Sbjct: 1   MVERRKPLVLSSTKILLDSIRNSARLNKRDGVTG--NELSANESSPTLHLPVGILRLSDE 58

Query: 306 NRMDILDPKIVSLDDAALVGLSTSVLKRLSITSGSLILVKNLETNIQRIGQAVVLDPPKT 485
             +   DPK+  LDD+ALVGL TS LKRLS+TSGS +LV+N+ETN+ RI   VVLD P+ 
Sbjct: 59  KSVSS-DPKLALLDDSALVGLPTSALKRLSVTSGSPVLVRNVETNVWRIAHVVVLDSPRA 117

Query: 486 REASSEDKLPPSKSSRVMLVFPSYNFSQSRCAPFEPEVSYLSSLLAFNLNLHVSCLKSLV 665
              SS+ KLP S S   ML+FPS  + Q+     + EV+YLS LLAFNL+LH+SCLKSLV
Sbjct: 118 HGHSSDSKLPLSHSPHTMLIFPSLKYPQNDSVLLDGEVAYLSPLLAFNLDLHISCLKSLV 177

Query: 666 HQGKENLASLFEAKVDDETNENGSKDSIINLGVESWSQSPRFASHLRASFVKIPECGALE 845
           HQGKE LA LFEAK D+ET   GS+ S I+L +E  ++ PRFASHLRASFVKIPECG LE
Sbjct: 178 HQGKETLAYLFEAKADEETRGRGSEASPISLSLEQSARLPRFASHLRASFVKIPECGTLE 237

Query: 846 SLKGSSSIEAEDRQDMIDLALN 911
           SL+G+SSIEAEDRQ+MIDLAL+
Sbjct: 238 SLQGNSSIEAEDRQEMIDLALH 259


>ref|XP_002520662.1| peroxisome assembly factor-2, putative [Ricinus communis]
           gi|223540047|gb|EEF41624.1| peroxisome assembly
           factor-2, putative [Ricinus communis]
          Length = 920

 Score =  251 bits (642), Expect = 1e-64
 Identities = 147/265 (55%), Positives = 182/265 (68%), Gaps = 3/265 (1%)
 Frame = +3

Query: 126 MVERR-KPLVLSSTKTLVDSLLNSSKTKERKIETERPNQLPGDVTSPTLQLRAGILRLSN 302
           MVERR KPLVLSSTK LVDS+L+SS+                D   P L   AGILRLS 
Sbjct: 1   MVERRRKPLVLSSTKFLVDSVLSSSRISR-------------DDLPPRLLFPAGILRLSK 47

Query: 303 DNRMDILDP--KIVSLDDAALVGLSTSVLKRLSITSGSLILVKNLETNIQRIGQAVVLDP 476
           D R+  LD   K+ SLDD+ALVGL T+ LK+L++T GS +LVKN+ETN +RI Q V+LDP
Sbjct: 48  D-RIGTLDSTSKLTSLDDSALVGLPTAALKKLAVTCGSPVLVKNIETNKRRIAQVVILDP 106

Query: 477 PKTREASSEDKLPPSKSSRVMLVFPSYNFSQSRCAPFEPEVSYLSSLLAFNLNLHVSCLK 656
           P+    ++     P+  S  MLVFPSY+         + E+++LS LLAFNL+LH+SCL 
Sbjct: 107 PRNHGHTASCVKQPN--SHTMLVFPSYSLPSDEPLILDDEIAFLSPLLAFNLDLHISCLN 164

Query: 657 SLVHQGKENLASLFEAKVDDETNENGSKDSIINLGVESWSQSPRFASHLRASFVKIPECG 836
           SLVHQG E L SLF +K +D+T    S  S+INL +E  +Q PR+ASHLR SFVKIPECG
Sbjct: 165 SLVHQGNERLVSLFNSKTNDDTCGEVSHHSLINLELEPLAQLPRYASHLRVSFVKIPECG 224

Query: 837 ALESLKGSSSIEAEDRQDMIDLALN 911
            L+SLKGSSS+EAEDRQ MIDLAL+
Sbjct: 225 MLDSLKGSSSVEAEDRQGMIDLALH 249


>ref|NP_171799.2| peroxin 6 [Arabidopsis thaliana] gi|75330784|sp|Q8RY16.1|PEX6_ARATH
           RecName: Full=Peroxisome biogenesis protein 6; AltName:
           Full=Peroxin-6; Short=AtPEX6 gi|19310449|gb|AAL84960.1|
           At1g03000/F22D16.27 [Arabidopsis thaliana]
           gi|24797060|gb|AAN64542.1| At1g03000/F22D16.27
           [Arabidopsis thaliana] gi|37223130|gb|AAQ90161.1| AAA
           family ATPase peroxin 6 [Arabidopsis thaliana]
           gi|332189392|gb|AEE27513.1| peroxin 6 [Arabidopsis
           thaliana]
          Length = 941

 Score =  238 bits (608), Expect = 1e-60
 Identities = 143/266 (53%), Positives = 182/266 (68%), Gaps = 5/266 (1%)
 Frame = +3

Query: 126 MVERRKPLVLSSTKTLVDSLLNSSKTKERKIETERPNQLPGDVTSPTLQLRAGILRLSND 305
           MVERR PLVLSST++ + S+LNSS+      + +R     GD+     +L AGILR   D
Sbjct: 1   MVERRNPLVLSSTRSTLRSVLNSSQPSSA--DGDRVLNKDGDLLRGNARLSAGILRWRKD 58

Query: 306 NRMDILDPKIVSLDDAALVGLSTSVLKRLSITSGSLILVKNLETNIQRIGQAVVLDPPKT 485
              ++ D K+ SLDD+ALVGLST +LKRLSI SGSL++VKN+E  IQR+ Q VVLDPPKT
Sbjct: 59  GE-NVSDAKLDSLDDSALVGLSTQLLKRLSINSGSLVVVKNIEIGIQRVAQVVVLDPPKT 117

Query: 486 R-EASSEDKLPPSKSSRVMLVFPSYNFSQSRCAPFEPEVSYLSSLLAFNLNLHVSCLKSL 662
             E +S  ++P S S   MLVFP+Y+    +    + EV+YLS +LAFNL+LH+SCLKSL
Sbjct: 118 TLEDASLTQVPVSDSLHTMLVFPTYDLMGQQL--LDQEVAYLSPMLAFNLSLHISCLKSL 175

Query: 663 VHQGKENLASLFEAKVDDE----TNENGSKDSIINLGVESWSQSPRFASHLRASFVKIPE 830
           VH+G   L   FEAK D+E    + E+GSK   I L +E  SQ P +ASHLR SFVKIPE
Sbjct: 176 VHRGNGVLEKYFEAKCDEEFIGKSAEDGSK---IGLDLEPVSQVPGYASHLRVSFVKIPE 232

Query: 831 CGALESLKGSSSIEAEDRQDMIDLAL 908
           CG + SLK +SS EAE+RQ +ID AL
Sbjct: 233 CGTIPSLKVNSSFEAEERQGLIDSAL 258


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