BLASTX nr result

ID: Panax21_contig00006020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006020
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266747.1| PREDICTED: U-box domain-containing protein 1...   395   e-108
emb|CAN71048.1| hypothetical protein VITISV_006741 [Vitis vinifera]   395   e-108
ref|XP_002308247.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104
emb|CBI18054.3| unnamed protein product [Vitis vinifera]              372   e-101
ref|XP_002323061.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100

>ref|XP_002266747.1| PREDICTED: U-box domain-containing protein 16 [Vitis vinifera]
          Length = 677

 Score =  395 bits (1014), Expect = e-108
 Identities = 194/259 (74%), Positives = 221/259 (85%)
 Frame = -1

Query: 777  RRRKSAADMTFPADFRCPISLDLMRDPVVVQTGQTYDRGSINLWFESGHNTCPKTSQTLS 598
            RR+KS  D   PADFRCPI+LDLMRDPVVV TGQTYDR SIN W ESGHN CPKT Q L+
Sbjct: 258  RRQKSMTDTIIPADFRCPITLDLMRDPVVVATGQTYDRTSINRWIESGHNMCPKTGQILA 317

Query: 597  HTDLIPNRALKSLIAMWCREQRIPFEATEINEKSNGVITNKTALEATRMTVSYLINKLTV 418
            HT+LI NRAL++LI +WCREQ IPF+ TE+N+K      NKT   AT+MTV +LINKLT 
Sbjct: 318  HTNLIQNRALRNLIILWCREQEIPFQTTEVNDKVKAATQNKTLFGATKMTVLFLINKLTD 377

Query: 417  SQSTETTNRMVHELRALAKSDSDNRACIAEAGGLPLLVKFLGSDYPNLQVNAVTTILNLS 238
            S+S E TNR+VHELR LAK+DS++RACIAEAG +PLLV+FLGSD P+LQVNAVTT+LNLS
Sbjct: 378  SESVEATNRVVHELRVLAKTDSESRACIAEAGAIPLLVRFLGSDNPSLQVNAVTTLLNLS 437

Query: 237  ILEANKTRIMETDGVLNGVIEVLRSGATWEAKGNAAATIFSLTGVHAYRKKLGRKTRVVK 58
            ILEANKTRIME DG LNGVIEVLRSGATWEAKGNAAATIFSL GV +YRK+LG+KTRV+K
Sbjct: 438  ILEANKTRIMEIDGALNGVIEVLRSGATWEAKGNAAATIFSLAGVQSYRKRLGKKTRVIK 497

Query: 57   GLIDLAKAGPTSSKRDALV 1
            GL+DLAK GP SS+RDALV
Sbjct: 498  GLMDLAKGGPASSRRDALV 516


>emb|CAN71048.1| hypothetical protein VITISV_006741 [Vitis vinifera]
          Length = 677

 Score =  395 bits (1014), Expect = e-108
 Identities = 194/259 (74%), Positives = 221/259 (85%)
 Frame = -1

Query: 777  RRRKSAADMTFPADFRCPISLDLMRDPVVVQTGQTYDRGSINLWFESGHNTCPKTSQTLS 598
            RR+KS  D   PADFRCPI+LDLMRDPVVV TGQTYDR SIN W ESGHN CPKT Q L+
Sbjct: 258  RRQKSMTDTIIPADFRCPITLDLMRDPVVVATGQTYDRTSINRWIESGHNXCPKTGQILA 317

Query: 597  HTDLIPNRALKSLIAMWCREQRIPFEATEINEKSNGVITNKTALEATRMTVSYLINKLTV 418
            HT+LI NRAL++LI +WCREQ IPF+ TE+N+K      NKT   AT+MTV +LINKLT 
Sbjct: 318  HTNLIQNRALRNLIILWCREQEIPFQTTEVNDKVKAATQNKTLFGATKMTVLFLINKLTD 377

Query: 417  SQSTETTNRMVHELRALAKSDSDNRACIAEAGGLPLLVKFLGSDYPNLQVNAVTTILNLS 238
            S+S E TNR+VHELR LAK+DS++RACIAEAG +PLLV+FLGSD P+LQVNAVTT+LNLS
Sbjct: 378  SESVEATNRVVHELRVLAKTDSESRACIAEAGAIPLLVRFLGSDNPSLQVNAVTTLLNLS 437

Query: 237  ILEANKTRIMETDGVLNGVIEVLRSGATWEAKGNAAATIFSLTGVHAYRKKLGRKTRVVK 58
            ILEANKTRIME DG LNGVIEVLRSGATWEAKGNAAATIFSL GV +YRK+LG+KTRV+K
Sbjct: 438  ILEANKTRIMEIDGALNGVIEVLRSGATWEAKGNAAATIFSLAGVQSYRKRLGKKTRVIK 497

Query: 57   GLIDLAKAGPTSSKRDALV 1
            GL+DLAK GP SS+RDALV
Sbjct: 498  GLMDLAKGGPASSRRDALV 516


>ref|XP_002308247.1| predicted protein [Populus trichocarpa] gi|222854223|gb|EEE91770.1|
            predicted protein [Populus trichocarpa]
          Length = 679

 Score =  384 bits (986), Expect = e-104
 Identities = 190/264 (71%), Positives = 227/264 (85%), Gaps = 4/264 (1%)
 Frame = -1

Query: 780  TRRRKSAADMTFPADFRCPISLDLMRDPVVVQTGQTYDRGSINLWFESGHNTCPKTSQTL 601
            +R +K A+D+  P DFRCPISLDLMRDPVVV TGQTYDR SINLW ESGH+TCPKT Q L
Sbjct: 257  SRSKKLASDVNVPVDFRCPISLDLMRDPVVVATGQTYDRESINLWIESGHSTCPKTGQAL 316

Query: 600  SHTDLIPNRALKSLIAMWCREQRIPFEATEINEKSNGVITNKTALEATRMTVSYLINKLT 421
             +T+LIPNRALK+LIAMWCREQ+IPFE  E N + + VI +K ALEA +MTVS+L+NK++
Sbjct: 317  VNTNLIPNRALKNLIAMWCREQKIPFETAEGNNRIDRVIKSKAALEANKMTVSFLVNKMS 376

Query: 420  VSQSTETTNRMVHELRALAKSDSDNRACIAEAGGLPLLVKFL----GSDYPNLQVNAVTT 253
             SQS E  N +++ELRALAKS+SD+RACIAEAG +P+L ++L    GS++PNLQVNAVT 
Sbjct: 377  ASQSMEAVNGVIYELRALAKSNSDSRACIAEAGAIPVLARYLGPDIGSEFPNLQVNAVTA 436

Query: 252  ILNLSILEANKTRIMETDGVLNGVIEVLRSGATWEAKGNAAATIFSLTGVHAYRKKLGRK 73
            +LNLSILEANKT+I+E    LNGVIEVLR+GATWEAKGNAAATIFSL+GVH+YRK+LGRK
Sbjct: 437  MLNLSILEANKTKIIENGRALNGVIEVLRTGATWEAKGNAAATIFSLSGVHSYRKRLGRK 496

Query: 72   TRVVKGLIDLAKAGPTSSKRDALV 1
            TRVVKGL+DLAK+GP SSKRDALV
Sbjct: 497  TRVVKGLVDLAKSGPASSKRDALV 520


>emb|CBI18054.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  372 bits (954), Expect = e-101
 Identities = 182/244 (74%), Positives = 208/244 (85%)
 Frame = -1

Query: 777 RRRKSAADMTFPADFRCPISLDLMRDPVVVQTGQTYDRGSINLWFESGHNTCPKTSQTLS 598
           RR+KS  D   PADFRCPI+LDLMRDPVVV TGQTYDR SIN W ESGHN CPKT Q L+
Sbjct: 258 RRQKSMTDTIIPADFRCPITLDLMRDPVVVATGQTYDRTSINRWIESGHNMCPKTGQILA 317

Query: 597 HTDLIPNRALKSLIAMWCREQRIPFEATEINEKSNGVITNKTALEATRMTVSYLINKLTV 418
           HT+LI NRAL++LI +WCREQ IPF+ TE+N+K      NKT   AT+MTV +LINKLT 
Sbjct: 318 HTNLIQNRALRNLIILWCREQEIPFQTTEVNDKVKAATQNKTLFGATKMTVLFLINKLTD 377

Query: 417 SQSTETTNRMVHELRALAKSDSDNRACIAEAGGLPLLVKFLGSDYPNLQVNAVTTILNLS 238
           S+S E TNR+VHELR LAK+DS++RACIAEAG +PLLV+FLGSD P+LQVNAVTT+LNLS
Sbjct: 378 SESVEATNRVVHELRVLAKTDSESRACIAEAGAIPLLVRFLGSDNPSLQVNAVTTLLNLS 437

Query: 237 ILEANKTRIMETDGVLNGVIEVLRSGATWEAKGNAAATIFSLTGVHAYRKKLGRKTRVVK 58
           ILEANKTRIME DG LNGVIEVLRSGATWEAKGNAAATIFSL GV +YRK+LG+KTRV+K
Sbjct: 438 ILEANKTRIMEIDGALNGVIEVLRSGATWEAKGNAAATIFSLAGVQSYRKRLGKKTRVIK 497

Query: 57  GLID 46
           GLI+
Sbjct: 498 GLIE 501


>ref|XP_002323061.1| predicted protein [Populus trichocarpa] gi|222867691|gb|EEF04822.1|
            predicted protein [Populus trichocarpa]
          Length = 654

 Score =  370 bits (951), Expect = e-100
 Identities = 185/264 (70%), Positives = 218/264 (82%), Gaps = 4/264 (1%)
 Frame = -1

Query: 780  TRRRKSAADMTFPADFRCPISLDLMRDPVVVQTGQTYDRGSINLWFESGHNTCPKTSQTL 601
            ++ +K A+D   PADFRCPISLDLMRDPVV+ TGQTYDR SI LW ESGHNTCPKT Q L
Sbjct: 258  SKTKKLASDANIPADFRCPISLDLMRDPVVMATGQTYDRESIALWIESGHNTCPKTGQAL 317

Query: 600  SHTDLIPNRALKSLIAMWCREQRIPFEATEINEKSNGVITNKTALEATRMTVSYLINKLT 421
             HT LIPN+ALK+LIAMWCRE +IPFE    N ++NGVI NK ALEAT+MT S+L+NK++
Sbjct: 318  VHTSLIPNQALKNLIAMWCRELKIPFETAGDNNRTNGVIKNKAALEATKMTASFLVNKMS 377

Query: 420  VSQSTETTNRMVHELRALAKSDSDNRACIAEAGGLPLLVKFLGSDYP----NLQVNAVTT 253
             SQS E  N +++ELR LAKS+SD+RACIAEAG +P+L ++LGSD      NLQVNAVT 
Sbjct: 378  ASQSMEAVNGVIYELRTLAKSNSDSRACIAEAGAIPVLARYLGSDVGVGSLNLQVNAVTA 437

Query: 252  ILNLSILEANKTRIMETDGVLNGVIEVLRSGATWEAKGNAAATIFSLTGVHAYRKKLGRK 73
            +LNLSILEANKT+IME    LNGVIEVLR+GATWEAKGNAAATIFSL+ VH++RK LGRK
Sbjct: 438  MLNLSILEANKTKIMENGKALNGVIEVLRTGATWEAKGNAAATIFSLSCVHSHRKLLGRK 497

Query: 72   TRVVKGLIDLAKAGPTSSKRDALV 1
            TRV+KGL+DLAK+GP   KRDALV
Sbjct: 498  TRVIKGLMDLAKSGPPGPKRDALV 521


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