BLASTX nr result

ID: Panax21_contig00005979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005979
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143085.1| PREDICTED: cullin-1-like [Cucumis sativus] g...   331   3e-89
ref|XP_002330364.1| predicted protein [Populus trichocarpa] gi|2...   328   4e-88
gb|ADI39635.1| plastid CUL1 [Hevea brasiliensis]                      325   3e-87
gb|AFJ21665.1| cullin 1-like protein B [Prunus avium]                 323   7e-87
emb|CCH26221.1| CUL1 protein [Pyrus x bretschneideri]                 322   2e-86

>ref|XP_004143085.1| PREDICTED: cullin-1-like [Cucumis sativus]
           gi|449517495|ref|XP_004165781.1| PREDICTED:
           cullin-1-like [Cucumis sativus]
          Length = 744

 Score =  331 bits (849), Expect = 3e-89
 Identities = 164/172 (95%), Positives = 168/172 (97%)
 Frame = -1

Query: 516 EGEQIDRALLKNVLDIFVEIGMSQMDYYENDFEEAMLKDTAAYYSRKASNWIVEDSCPDY 337
           EGEQIDRALLKNVLDIFVEIGM QMDYYENDFE AMLKDTAAYYSRKASNWI+EDSCPDY
Sbjct: 164 EGEQIDRALLKNVLDIFVEIGMGQMDYYENDFEAAMLKDTAAYYSRKASNWILEDSCPDY 223

Query: 336 MLKAEECLKREKDRVSHYLHVSSEPKLLEKVQHELLSVYATLLLEKEHSGCHALLRDDKV 157
           MLKAEECLKREKDRVSHYLH SSEPKLLEKVQHELLSVYAT LLEKEHSGCHALLRDDKV
Sbjct: 224 MLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYATQLLEKEHSGCHALLRDDKV 283

Query: 156 DDLSRMYRLFSKIPRGLDPVSNIFKQHVTAEGTALVKQAEDAASNKKAEKKD 1
           +DLSRM+RLFSKIP+GLDPVSNIFKQHVTAEGTALVKQAEDAASNKKAEKKD
Sbjct: 284 EDLSRMFRLFSKIPKGLDPVSNIFKQHVTAEGTALVKQAEDAASNKKAEKKD 335


>ref|XP_002330364.1| predicted protein [Populus trichocarpa] gi|222871568|gb|EEF08699.1|
           predicted protein [Populus trichocarpa]
          Length = 744

 Score =  328 bits (840), Expect = 4e-88
 Identities = 162/172 (94%), Positives = 167/172 (97%)
 Frame = -1

Query: 516 EGEQIDRALLKNVLDIFVEIGMSQMDYYENDFEEAMLKDTAAYYSRKASNWIVEDSCPDY 337
           EGEQIDRALLKNVLDIFVEIGM QMDYYENDFE AMLKDTAAYYSRKASNWI++DSCPDY
Sbjct: 164 EGEQIDRALLKNVLDIFVEIGMGQMDYYENDFEAAMLKDTAAYYSRKASNWILDDSCPDY 223

Query: 336 MLKAEECLKREKDRVSHYLHVSSEPKLLEKVQHELLSVYATLLLEKEHSGCHALLRDDKV 157
           MLKAEECLKREKDRVSHYLH SSEPKLLEKVQHELLSVYAT LLEKEHSGCHALLRDDKV
Sbjct: 224 MLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYATQLLEKEHSGCHALLRDDKV 283

Query: 156 DDLSRMYRLFSKIPRGLDPVSNIFKQHVTAEGTALVKQAEDAASNKKAEKKD 1
           +DLSRM+RLFSKIPRGLDPVS IFKQHVTAEGTALVKQAEDAASNKKA+KKD
Sbjct: 284 EDLSRMFRLFSKIPRGLDPVSGIFKQHVTAEGTALVKQAEDAASNKKADKKD 335


>gb|ADI39635.1| plastid CUL1 [Hevea brasiliensis]
          Length = 708

 Score =  325 bits (832), Expect = 3e-87
 Identities = 160/172 (93%), Positives = 166/172 (96%)
 Frame = -1

Query: 516 EGEQIDRALLKNVLDIFVEIGMSQMDYYENDFEEAMLKDTAAYYSRKASNWIVEDSCPDY 337
           EGEQIDRALLKNVLDIF+EIGM QMDYYENDFE AMLKDTAAYYSRKASNWI+EDSCPDY
Sbjct: 164 EGEQIDRALLKNVLDIFIEIGMGQMDYYENDFEAAMLKDTAAYYSRKASNWILEDSCPDY 223

Query: 336 MLKAEECLKREKDRVSHYLHVSSEPKLLEKVQHELLSVYATLLLEKEHSGCHALLRDDKV 157
           MLKAEECLKREKDRVSHYLH SSEPKLLEKVQHELLSVYA  LLEKEHSGCHALLRDDKV
Sbjct: 224 MLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKV 283

Query: 156 DDLSRMYRLFSKIPRGLDPVSNIFKQHVTAEGTALVKQAEDAASNKKAEKKD 1
           +DLSRM+RLFSKIPRGLDPVS+IFKQHVTAEGTALVKQAEDAAS KKA+KKD
Sbjct: 284 EDLSRMFRLFSKIPRGLDPVSSIFKQHVTAEGTALVKQAEDAASKKKADKKD 335


>gb|AFJ21665.1| cullin 1-like protein B [Prunus avium]
          Length = 744

 Score =  323 bits (829), Expect = 7e-87
 Identities = 160/172 (93%), Positives = 166/172 (96%)
 Frame = -1

Query: 516 EGEQIDRALLKNVLDIFVEIGMSQMDYYENDFEEAMLKDTAAYYSRKASNWIVEDSCPDY 337
           EGEQIDRALLKNVLDIFVEIGM  MD+YENDFE  MLKDTAAYYSRKASNWI+EDSCPDY
Sbjct: 164 EGEQIDRALLKNVLDIFVEIGMGHMDHYENDFEADMLKDTAAYYSRKASNWILEDSCPDY 223

Query: 336 MLKAEECLKREKDRVSHYLHVSSEPKLLEKVQHELLSVYATLLLEKEHSGCHALLRDDKV 157
           MLKAEECL+REKDRV+HYLH SSEPKLLEKVQHELLSVYAT LLEKEHSGCHALLRDDKV
Sbjct: 224 MLKAEECLRREKDRVAHYLHSSSEPKLLEKVQHELLSVYATQLLEKEHSGCHALLRDDKV 283

Query: 156 DDLSRMYRLFSKIPRGLDPVSNIFKQHVTAEGTALVKQAEDAASNKKAEKKD 1
           DDLSRM+RLFSKIPRGLDPVS+IFKQHVTAEGTALVKQAEDAASNKKAEKKD
Sbjct: 284 DDLSRMFRLFSKIPRGLDPVSSIFKQHVTAEGTALVKQAEDAASNKKAEKKD 335


>emb|CCH26221.1| CUL1 protein [Pyrus x bretschneideri]
          Length = 744

 Score =  322 bits (825), Expect = 2e-86
 Identities = 161/172 (93%), Positives = 165/172 (95%)
 Frame = -1

Query: 516 EGEQIDRALLKNVLDIFVEIGMSQMDYYENDFEEAMLKDTAAYYSRKASNWIVEDSCPDY 337
           EGEQIDRALLKNVLDIFVEIGM QM +YENDFE  MLKDTAAYYSRKASNWI+EDSCPDY
Sbjct: 164 EGEQIDRALLKNVLDIFVEIGMGQMGHYENDFETDMLKDTAAYYSRKASNWILEDSCPDY 223

Query: 336 MLKAEECLKREKDRVSHYLHVSSEPKLLEKVQHELLSVYATLLLEKEHSGCHALLRDDKV 157
           MLKAEECLKREKDRVS+YLH SSEPKLLEKVQHELLSVYAT LLEKEHSGCHALLRDDKV
Sbjct: 224 MLKAEECLKREKDRVSNYLHSSSEPKLLEKVQHELLSVYATQLLEKEHSGCHALLRDDKV 283

Query: 156 DDLSRMYRLFSKIPRGLDPVSNIFKQHVTAEGTALVKQAEDAASNKKAEKKD 1
           DDLSRM+RLFSKIPRGLDPVS IFKQHVTAEGTALVKQAEDAASNKKAEKKD
Sbjct: 284 DDLSRMFRLFSKIPRGLDPVSQIFKQHVTAEGTALVKQAEDAASNKKAEKKD 335


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